RNA–Protein interactions for RNA: ENST00000490903.5

CKAP2-207, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CKAP2, Length 3,395 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-207ENST00000490903 EYA3Q99504 573 aa6.93□□□□□ -1.3
CKAP2-207ENST00000490903 METTL22Q9BUU2 404 aaPredicted RBP6.93□□□□□ -1.3
CKAP2-207ENST00000490903 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.93□□□□□ -1.3
CKAP2-207ENST00000490903 CHMP3Q9Y3E7 222 aa6.93□□□□□ -1.3
CKAP2-207ENST00000490903 YDJCA8MPS7 323 aa6.92□□□□□ -1.3
CKAP2-207ENST00000490903 PDE8AO60658 829 aa6.92□□□□□ -1.3
CKAP2-207ENST00000490903 HSP90B1P14625 803 aaKnown RBP6.92□□□□□ -1.3
CKAP2-207ENST00000490903 USP48Q86UV5 1035 aa6.92□□□□□ -1.3
CKAP2-207ENST00000490903 ANKRD18AQ8IVF6 992 aa6.92□□□□□ -1.3
CKAP2-207ENST00000490903 CCDC191Q8NCU4 936 aa6.92□□□□□ -1.3
CKAP2-207ENST00000490903 TRPM4Q8TD43 1214 aa6.92□□□□□ -1.3
CKAP2-207ENST00000490903 CHMP4AQ9BY43 222 aa6.92□□□□□ -1.3
CKAP2-207ENST00000490903 COL4A5P29400 1685 aa6.92□□□□□ -1.3
CKAP2-207ENST00000490903 PASKQ96RG2 1323 aa6.92□□□□□ -1.3
CKAP2-207ENST00000490903 FOXN1O15353 648 aa6.92□□□□□ -1.3
CKAP2-207ENST00000490903 ECE2O60344 883 aa6.92□□□□□ -1.3
CKAP2-207ENST00000490903 KSR2Q6VAB6 950 aa6.92□□□□□ -1.3
CKAP2-207ENST00000490903 UBE3BQ7Z3V4 1068 aa6.92□□□□□ -1.3
CKAP2-207ENST00000490903 BEGAINQ9BUH8 593 aa6.92□□□□□ -1.3
CKAP2-207ENST00000490903 GGA1Q9UJY5 639 aa6.92□□□□□ -1.3
CKAP2-207ENST00000490903 TAF1P21675 1872 aa6.92□□□□□ -1.3
CKAP2-207ENST00000490903 PCCAP05165 728 aaPredicted RBP6.92□□□□□ -1.3
CKAP2-207ENST00000490903 EXOSC9Q06265 439 aaKnown RBP6.92□□□□□ -1.3
CKAP2-207ENST00000490903 TRIM28Q13263 835 aaKnown RBP6.92□□□□□ -1.3
CKAP2-207ENST00000490903 TMC4Q7Z404 712 aa6.92□□□□□ -1.3
CKAP2-207ENST00000490903 TBC1D16Q8TBP0 767 aa6.92□□□□□ -1.3
CKAP2-207ENST00000490903 RTFDC1Q9BY42 306 aaPredicted RBP6.92□□□□□ -1.3
CKAP2-207ENST00000490903 TSKSQ9UJT2 592 aa6.92□□□□□ -1.3
CKAP2-207ENST00000490903 WTIPA6NIX2 430 aaPredicted RBP6.91□□□□□ -1.3
CKAP2-207ENST00000490903 HIRAP54198 1017 aaPredicted RBP6.91□□□□□ -1.3
CKAP2-207ENST00000490903 SCAF8Q9UPN6 1271 aaKnown RBP6.91□□□□□ -1.3
CKAP2-207ENST00000490903 RIC1Q4ADV7 1423 aa6.91□□□□□ -1.3
CKAP2-207ENST00000490903 WDR33Q9C0J8 1336 aaKnown RBP6.91□□□□□ -1.3
CKAP2-207ENST00000490903 IGKV5-2P06315 115 aa6.91□□□□□ -1.3
CKAP2-207ENST00000490903 LBX1P52954 281 aa6.91□□□□□ -1.3
CKAP2-207ENST00000490903 VPS33BQ9H267 617 aa6.91□□□□□ -1.3
CKAP2-207ENST00000490903 CNTNAP1P78357 1384 aa6.91□□□□□ -1.3
CKAP2-207ENST00000490903 F6X3S4 739 aa6.91□□□□□ -1.3
CKAP2-207ENST00000490903 AOC2O75106 756 aa6.91□□□□□ -1.3
CKAP2-207ENST00000490903 CST9Q5W186 159 aa6.91□□□□□ -1.3
CKAP2-207ENST00000490903 SLC4A10Q6U841 1118 aa6.91□□□□□ -1.3
CKAP2-207ENST00000490903 CAPNS2Q96L46 248 aa6.91□□□□□ -1.3
CKAP2-207ENST00000490903 GREM2Q9H772 168 aa6.91□□□□□ -1.3
CKAP2-207ENST00000490903 PLIN1O60240 522 aa6.9□□□□□ -1.3
CKAP2-207ENST00000490903 EGFRP00533 1210 aa6.9□□□□□ -1.3
CKAP2-207ENST00000490903 FLIIQ13045 1269 aa6.9□□□□□ -1.3
CKAP2-207ENST00000490903 CDC5LQ99459 802 aaKnown RBP6.9□□□□□ -1.3
CKAP2-207ENST00000490903 KCNJ4P48050 445 aa6.9□□□□□ -1.31
CKAP2-207ENST00000490903 CTSWP56202 376 aa6.9□□□□□ -1.31
CKAP2-207ENST00000490903 CDC37L1Q7L3B6 337 aa6.9□□□□□ -1.31
CKAP2-207ENST00000490903 KRT26Q7Z3Y9 468 aa6.9□□□□□ -1.31
CKAP2-207ENST00000490903 DCPSQ96C86 337 aaKnown RBP6.9□□□□□ -1.31
CKAP2-207ENST00000490903 MPHOSPH8Q99549 860 aa6.9□□□□□ -1.31
CKAP2-207ENST00000490903 SNED1Q8TER0 1413 aa6.9□□□□□ -1.31
CKAP2-207ENST00000490903 NEURL1BA8MQ27 555 aa6.89□□□□□ -1.31
CKAP2-207ENST00000490903 IGHMBP2P38935 993 aaKnown RBP6.89□□□□□ -1.31
CKAP2-207ENST00000490903 HELBQ8NG08 1087 aaPredicted RBP6.89□□□□□ -1.31
CKAP2-207ENST00000490903 FANCIQ9NVI1 1328 aa6.89□□□□□ -1.31
CKAP2-207ENST00000490903 ECE1P42892 770 aa6.89□□□□□ -1.31
CKAP2-207ENST00000490903 CTCFP49711 727 aaPredicted RBP6.89□□□□□ -1.31
CKAP2-207ENST00000490903 TTLL11Q8NHH1 800 aa6.89□□□□□ -1.31
CKAP2-207ENST00000490903 DNAAF4Q8WXU2 420 aa6.89□□□□□ -1.31
CKAP2-207ENST00000490903 MXD3Q9BW11 206 aa6.89□□□□□ -1.31
CKAP2-207ENST00000490903 SPINK5Q9NQ38 1064 aaPredicted RBP6.89□□□□□ -1.31
CKAP2-207ENST00000490903 SCN4AP35499 1836 aa6.89□□□□□ -1.31
CKAP2-207ENST00000490903 ARFGEF2Q9Y6D5 1785 aa6.89□□□□□ -1.31
CKAP2-207ENST00000490903 ADM5C9JUS6 153 aa6.89□□□□□ -1.31
CKAP2-207ENST00000490903 HUNKP57058 714 aa6.89□□□□□ -1.31
CKAP2-207ENST00000490903 TAF7LQ5H9L4 462 aa6.89□□□□□ -1.31
CKAP2-207ENST00000490903 RASSF10A6NK89 507 aa6.88□□□□□ -1.31
CKAP2-207ENST00000490903 SNAP23O00161 211 aa6.88□□□□□ -1.31
CKAP2-207ENST00000490903 VAMP4O75379 141 aa6.88□□□□□ -1.31
CKAP2-207ENST00000490903 MAP2K1Q02750 393 aaPredicted RBP6.88□□□□□ -1.31
CKAP2-207ENST00000490903 KIF4BQ2VIQ3 1234 aa6.88□□□□□ -1.31
CKAP2-207ENST00000490903 SULF1Q8IWU6 871 aa6.88□□□□□ -1.31
CKAP2-207ENST00000490903 MYH16Q9H6N6 1097 aa6.88□□□□□ -1.31
CKAP2-207ENST00000490903 MINPP1Q9UNW1 487 aa6.88□□□□□ -1.31
CKAP2-207ENST00000490903 ASTN2O75129 1339 aaPredicted RBP6.88□□□□□ -1.31
CKAP2-207ENST00000490903 XDHP47989 1333 aa6.88□□□□□ -1.31
CKAP2-207ENST00000490903 ITGA6P23229 1130 aa6.88□□□□□ -1.31
CKAP2-207ENST00000490903 ATP2B4P23634 1241 aa6.88□□□□□ -1.31
CKAP2-207ENST00000490903 GCKRQ14397 625 aa6.88□□□□□ -1.31
CKAP2-207ENST00000490903 CCDC27Q2M243 656 aa6.88□□□□□ -1.31
CKAP2-207ENST00000490903 FAM161AQ3B820 660 aa6.88□□□□□ -1.31
CKAP2-207ENST00000490903 PRAMEF18Q5VWM3 479 aa6.88□□□□□ -1.31
CKAP2-207ENST00000490903 DPF2Q92785 391 aa6.88□□□□□ -1.31
CKAP2-207ENST00000490903 WBP1LQ9NX94 342 aa6.88□□□□□ -1.31
CKAP2-207ENST00000490903 GGA3Q9NZ52 723 aa6.88□□□□□ -1.31
CKAP2-207ENST00000490903 TAF5LO75529 589 aa6.88□□□□□ -1.31
CKAP2-207ENST00000490903 TTLL12Q14166 644 aaPredicted RBP6.88□□□□□ -1.31
CKAP2-207ENST00000490903 C9orf78Q9NZ63 289 aaPredicted RBP6.88□□□□□ -1.31
CKAP2-207ENST00000490903 JAG2Q9Y219 1238 aa6.88□□□□□ -1.31
CKAP2-207ENST00000490903 CCT4P50991 539 aaKnown RBP6.87□□□□□ -1.31
CKAP2-207ENST00000490903 PRKG1Q13976 671 aa6.87□□□□□ -1.31
CKAP2-207ENST00000490903 ANGEL2Q5VTE6 544 aaKnown RBP6.87□□□□□ -1.31
CKAP2-207ENST00000490903 SAPCD2Q86UD0 394 aa6.87□□□□□ -1.31
CKAP2-207ENST00000490903 WDR63Q8IWG1 891 aa6.87□□□□□ -1.31
CKAP2-207ENST00000490903 C2orf69Q8N8R5 385 aa6.87□□□□□ -1.31
CKAP2-207ENST00000490903 ZC3H15Q8WU90 426 aaKnown RBP6.87□□□□□ -1.31
CKAP2-207ENST00000490903 RTL9Q8NET4 1388 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms