RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 EIF4A1P60842 406 aaKnown RBP11.92□□□□□ -0.5
BRD9-209ENST00000490814 PROSER3Q2NL68 480 aa11.92□□□□□ -0.5
BRD9-209ENST00000490814 CREB3L3Q68CJ9 461 aa11.92□□□□□ -0.5
BRD9-209ENST00000490814 ZSCAN31Q96LW9 406 aaPredicted RBP11.92□□□□□ -0.5
BRD9-209ENST00000490814 TOMM22Q9NS69 142 aa11.92□□□□□ -0.5
BRD9-209ENST00000490814 PRAMEF22A3QJZ6 481 aa11.91□□□□□ -0.5
BRD9-209ENST00000490814 SATB1Q01826 763 aa11.91□□□□□ -0.5
BRD9-209ENST00000490814 POLA2Q14181 598 aa11.91□□□□□ -0.5
BRD9-209ENST00000490814 HSP90AB3PQ58FF7 597 aa11.91□□□□□ -0.5
BRD9-209ENST00000490814 NBPF6Q5VWK0 638 aa11.91□□□□□ -0.5
BRD9-209ENST00000490814 NBPF4Q96M43 638 aa11.91□□□□□ -0.5
BRD9-209ENST00000490814 USP21Q9UK80 565 aa11.91□□□□□ -0.5
BRD9-209ENST00000490814 VPS53Q5VIR6 699 aa11.91□□□□□ -0.5
BRD9-209ENST00000490814 TTC6Q86TZ1 520 aa11.91□□□□□ -0.5
BRD9-209ENST00000490814 LRRC2Q9BYS8 371 aa11.91□□□□□ -0.5
BRD9-209ENST00000490814 SH2B1Q9NRF2 756 aaPredicted RBP11.91□□□□□ -0.5
BRD9-209ENST00000490814 COL9A3Q14050 684 aaPredicted RBP11.91□□□□□ -0.5
BRD9-209ENST00000490814 RNF20Q5VTR2 975 aa11.91□□□□□ -0.5
BRD9-209ENST00000490814 LARP1Q6PKG0 1096 aaKnown RBP11.91□□□□□ -0.5
BRD9-209ENST00000490814 RIC3Q7Z5B4 369 aa11.91□□□□□ -0.5
BRD9-209ENST00000490814 KCNH5Q8NCM2 988 aa11.91□□□□□ -0.5
BRD9-209ENST00000490814 FAM200AQ8TCP9 573 aa11.91□□□□□ -0.5
BRD9-209ENST00000490814 ANKRD24Q8TF21 1146 aa11.91□□□□□ -0.5
BRD9-209ENST00000490814 CCDC171Q6TFL3 1326 aa11.91□□□□□ -0.5
BRD9-209ENST00000490814 SMTNL1A8MU46 457 aa11.9□□□□□ -0.5
BRD9-209ENST00000490814 CTIFO43310 598 aaKnown RBP11.9□□□□□ -0.5
BRD9-209ENST00000490814 FAM98CQ17RN3 349 aaKnown RBP11.9□□□□□ -0.5
BRD9-209ENST00000490814 ANO6Q4KMQ2 910 aa11.9□□□□□ -0.5
BRD9-209ENST00000490814 EVI5LQ96CN4 794 aa11.9□□□□□ -0.5
BRD9-209ENST00000490814 BRMS1Q9HCU9 246 aa11.9□□□□□ -0.5
BRD9-209ENST00000490814 TLR7Q9NYK1 1049 aaKnown RBP11.9□□□□□ -0.5
BRD9-209ENST00000490814 STRCP1A6NGW2 1772 aa11.9□□□□□ -0.5
BRD9-209ENST00000490814 PSMA5P28066 241 aa11.9□□□□□ -0.5
BRD9-209ENST00000490814 PIP4K2AP48426 406 aaPredicted RBP11.9□□□□□ -0.5
BRD9-209ENST00000490814 TYRO3Q06418 890 aa11.9□□□□□ -0.5
BRD9-209ENST00000490814 CREBRFQ8IUR6 639 aa11.9□□□□□ -0.5
BRD9-209ENST00000490814 TRMT1Q9NXH9 659 aaKnown RBP11.9□□□□□ -0.51
BRD9-209ENST00000490814 DBF4Q9UBU7 674 aaPredicted RBP11.9□□□□□ -0.51
BRD9-209ENST00000490814 FBXO3Q9UK99 471 aa11.9□□□□□ -0.51
BRD9-209ENST00000490814 USP31Q70CQ4 1352 aa11.89□□□□□ -0.51
BRD9-209ENST00000490814 GOLIM4O00461 696 aa11.89□□□□□ -0.51
BRD9-209ENST00000490814 TMEM87AQ8NBN3 555 aa11.89□□□□□ -0.51
BRD9-209ENST00000490814 A0A0D9SFI3 127 aa11.89□□□□□ -0.51
BRD9-209ENST00000490814 PDCP20941 246 aa11.89□□□□□ -0.51
BRD9-209ENST00000490814 GUCY2CP25092 1073 aa11.89□□□□□ -0.51
BRD9-209ENST00000490814 ERC1Q8IUD2 1116 aa11.89□□□□□ -0.51
BRD9-209ENST00000490814 EAF2Q96CJ1 260 aaPredicted RBP11.89□□□□□ -0.51
BRD9-209ENST00000490814 CLIP2Q9UDT6 1046 aa11.89□□□□□ -0.51
BRD9-209ENST00000490814 TAF6LQ9Y6J9 622 aa11.89□□□□□ -0.51
BRD9-209ENST00000490814 SOS2Q07890 1332 aaPredicted RBP11.89□□□□□ -0.51
BRD9-209ENST00000490814 TTC41PQ6P2S7 1318 aa11.89□□□□□ -0.51
BRD9-209ENST00000490814 CHD2O14647 1828 aaKnown RBP11.89□□□□□ -0.51
BRD9-209ENST00000490814 CEP135Q66GS9 1140 aa11.88□□□□□ -0.51
BRD9-209ENST00000490814 KIF18AQ8NI77 898 aa11.88□□□□□ -0.51
BRD9-209ENST00000490814 BICC1Q9H694 974 aaKnown RBP11.88□□□□□ -0.51
BRD9-209ENST00000490814 ZSWIM6Q9HCJ5 1215 aa11.88□□□□□ -0.51
BRD9-209ENST00000490814 KDRP35968 1356 aa11.88□□□□□ -0.51
BRD9-209ENST00000490814 SLC27A2O14975 620 aa11.88□□□□□ -0.51
BRD9-209ENST00000490814 DNAJC25Q9H1X3 360 aa11.88□□□□□ -0.51
BRD9-209ENST00000490814 QTRT2Q9H974 415 aaKnown RBP11.88□□□□□ -0.51
BRD9-209ENST00000490814 JAK2O60674 1132 aa11.88□□□□□ -0.51
BRD9-209ENST00000490814 NBPF20Q3BBV1 942 aa11.88□□□□□ -0.51
BRD9-209ENST00000490814 CBX8Q9HC52 389 aa11.88□□□□□ -0.51
BRD9-209ENST00000490814 GOLGA6L19H0YKK7 550 aa11.87□□□□□ -0.51
BRD9-209ENST00000490814 PLEKHO1Q53GL0 409 aaPredicted RBP11.87□□□□□ -0.51
BRD9-209ENST00000490814 ZSCAN25Q6NSZ9 544 aa11.87□□□□□ -0.51
BRD9-209ENST00000490814 FILIP1Q7Z7B0 1213 aa11.87□□□□□ -0.51
BRD9-209ENST00000490814 SUCLG2Q96I99 432 aa11.87□□□□□ -0.51
BRD9-209ENST00000490814 FUCA2Q9BTY2 467 aa11.87□□□□□ -0.51
BRD9-209ENST00000490814 ITSN1Q15811 1721 aa11.87□□□□□ -0.51
BRD9-209ENST00000490814 SLC39A6Q13433 755 aa11.87□□□□□ -0.51
BRD9-209ENST00000490814 RAPGEF4Q8WZA2 1011 aa11.87□□□□□ -0.51
BRD9-209ENST00000490814 PAXBP1Q9Y5B6 917 aa11.87□□□□□ -0.51
BRD9-209ENST00000490814 LTBP4Q8N2S1 1624 aa11.87□□□□□ -0.51
BRD9-209ENST00000490814 AFF2P51816 1311 aa11.87□□□□□ -0.51
BRD9-209ENST00000490814 CASQ1P31415 396 aa11.87□□□□□ -0.51
BRD9-209ENST00000490814 GYS2P54840 703 aa11.87□□□□□ -0.51
BRD9-209ENST00000490814 GUCY1B3Q02153 619 aa11.87□□□□□ -0.51
BRD9-209ENST00000490814 CCDC129Q6ZRS4 1044 aa11.87□□□□□ -0.51
BRD9-209ENST00000490814 C10orf67Q8IYJ2 551 aa11.87□□□□□ -0.51
BRD9-209ENST00000490814 MRVI1Q9Y6F6 885 aa11.87□□□□□ -0.51
BRD9-209ENST00000490814 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.87□□□□□ -0.51
BRD9-209ENST00000490814 GRM8O00222 908 aa11.86□□□□□ -0.51
BRD9-209ENST00000490814 DDX58O95786 925 aaKnown RBP11.86□□□□□ -0.51
BRD9-209ENST00000490814 CYP2C19P33261 490 aa11.86□□□□□ -0.51
BRD9-209ENST00000490814 ZNF165P49910 485 aa11.86□□□□□ -0.51
BRD9-209ENST00000490814 NEXNQ0ZGT2 675 aa11.86□□□□□ -0.51
BRD9-209ENST00000490814 ZNF330Q9Y3S2 320 aaPredicted RBP11.86□□□□□ -0.51
BRD9-209ENST00000490814 PEAK1Q9H792 1746 aa11.86□□□□□ -0.51
BRD9-209ENST00000490814 A0A087WWV3 80 aa11.86□□□□□ -0.51
BRD9-209ENST00000490814 BECN2A8MW95 431 aa11.86□□□□□ -0.51
BRD9-209ENST00000490814 IRF6O14896 467 aa11.86□□□□□ -0.51
BRD9-209ENST00000490814 PTPN14Q15678 1187 aa11.86□□□□□ -0.51
BRD9-209ENST00000490814 KSR2Q6VAB6 950 aa11.86□□□□□ -0.51
BRD9-209ENST00000490814 CACTINQ8WUQ7 758 aaKnown RBP11.86□□□□□ -0.51
BRD9-209ENST00000490814 ZNF215Q9UL58 517 aaPredicted RBP11.86□□□□□ -0.51
BRD9-209ENST00000490814 CHGBP05060 677 aa11.85□□□□□ -0.51
BRD9-209ENST00000490814 ZNF75DP51815 510 aa11.85□□□□□ -0.51
BRD9-209ENST00000490814 ST3GAL1Q11201 340 aa11.85□□□□□ -0.51
BRD9-209ENST00000490814 NECTIN1Q15223 517 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms