RNA–Protein interactions for RNA: ENST00000490690.1

SHROOM3-209, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 504 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-209ENST00000490690 G3BP1Q13283 466 aaKnown RBP eCLIP24.62■■□□□ 1.53
SHROOM3-209ENST00000490690 ANKIB1Q9P2G1 1089 aa24.62■■□□□ 1.53
SHROOM3-209ENST00000490690 MINPP1Q9UNW1 487 aa24.62■■□□□ 1.53
SHROOM3-209ENST00000490690 ARFGEF1Q9Y6D6 1849 aa24.61■■□□□ 1.53
SHROOM3-209ENST00000490690 PNMA6EA0A0J9YXQ4 647 aa24.61■■□□□ 1.53
SHROOM3-209ENST00000490690 ERC1Q8IUD2 1116 aa24.61■■□□□ 1.53
SHROOM3-209ENST00000490690 TAOK3Q9H2K8 898 aa24.61■■□□□ 1.53
SHROOM3-209ENST00000490690 LEMD3Q9Y2U8 911 aa24.61■■□□□ 1.53
SHROOM3-209ENST00000490690 ATP2B4P23634 1241 aa24.6■■□□□ 1.53
SHROOM3-209ENST00000490690 FKBP4Q02790 459 aaKnown RBP eCLIP24.6■■□□□ 1.53
SHROOM3-209ENST00000490690 EXOC6Q8TAG9 804 aa24.6■■□□□ 1.53
SHROOM3-209ENST00000490690 ZNF594Q96JF6 807 aaPredicted RBP24.6■■□□□ 1.53
SHROOM3-209ENST00000490690 EYA3Q99504 573 aa24.6■■□□□ 1.53
SHROOM3-209ENST00000490690 ZNF219Q9P2Y4 722 aaPredicted RBP24.6■■□□□ 1.53
SHROOM3-209ENST00000490690 WWC3Q9ULE0 1092 aa24.6■■□□□ 1.53
SHROOM3-209ENST00000490690 NSFL1CQ9UNZ2 370 aaKnown RBP24.6■■□□□ 1.53
SHROOM3-209ENST00000490690 SLX4Q8IY92 1834 aa24.59■■□□□ 1.53
SHROOM3-209ENST00000490690 YBX3P16989 372 aaKnown RBP eCLIP24.59■■□□□ 1.53
SHROOM3-209ENST00000490690 OS9Q13438 667 aaPredicted RBP24.59■■□□□ 1.53
SHROOM3-209ENST00000490690 ARHGAP27Q6ZUM4 889 aa24.59■■□□□ 1.53
SHROOM3-209ENST00000490690 RTFDC1Q9BY42 306 aaPredicted RBP24.59■■□□□ 1.53
SHROOM3-209ENST00000490690 GGA1Q9UJY5 639 aa24.59■■□□□ 1.53
SHROOM3-209ENST00000490690 NOP58Q9Y2X3 529 aaKnown RBP24.59■■□□□ 1.53
SHROOM3-209ENST00000490690 RIPOR2Q9Y4F9 1068 aa24.59■■□□□ 1.53
SHROOM3-209ENST00000490690 KCNJ4P48050 445 aa24.58■■□□□ 1.53
SHROOM3-209ENST00000490690 CHRNDQ07001 517 aa24.58■■□□□ 1.53
SHROOM3-209ENST00000490690 METTL24Q5JXM2 366 aa24.58■■□□□ 1.53
SHROOM3-209ENST00000490690 ERICH6BQ5W0A0 696 aa24.58■■□□□ 1.53
SHROOM3-209ENST00000490690 CEP126Q9P2H0 1117 aa24.58■■□□□ 1.53
SHROOM3-209ENST00000490690 SURF6O75683 361 aaKnown RBP24.57■■□□□ 1.52
SHROOM3-209ENST00000490690 LRRC37AA6NMS7 1700 aa24.57■■□□□ 1.52
SHROOM3-209ENST00000490690 RAB11FIP3O75154 756 aa24.56■■□□□ 1.52
SHROOM3-209ENST00000490690 SIL1Q9H173 461 aa24.56■■□□□ 1.52
SHROOM3-209ENST00000490690 AKAP2Q9Y2D5 859 aa24.56■■□□□ 1.52
SHROOM3-209ENST00000490690 GPSM2P81274 684 aa24.55■■□□□ 1.52
SHROOM3-209ENST00000490690 UBE4AQ14139 1066 aa24.55■■□□□ 1.52
SHROOM3-209ENST00000490690 KLHDC4Q8TBB5 520 aa24.55■■□□□ 1.52
SHROOM3-209ENST00000490690 RWDD1Q9H446 243 aaPredicted RBP24.55■■□□□ 1.52
SHROOM3-209ENST00000490690 C6orf229H3BNL8 230 aa24.54■■□□□ 1.52
SHROOM3-209ENST00000490690 UFL1O94874 794 aa24.54■■□□□ 1.52
SHROOM3-209ENST00000490690 PDE8BO95263 885 aa24.54■■□□□ 1.52
SHROOM3-209ENST00000490690 HDAC1Q13547 482 aaPredicted RBP24.54■■□□□ 1.52
SHROOM3-209ENST00000490690 LRRC24Q50LG9 513 aa24.54■■□□□ 1.52
SHROOM3-209ENST00000490690 PA2G4Q9UQ80 394 aaKnown RBP24.54■■□□□ 1.52
SHROOM3-209ENST00000490690 SNED1Q8TER0 1413 aa24.53■■□□□ 1.52
SHROOM3-209ENST00000490690 LMNB1P20700 586 aa24.53■■□□□ 1.52
SHROOM3-209ENST00000490690 IRX6P78412 446 aaPredicted RBP24.53■■□□□ 1.52
SHROOM3-209ENST00000490690 PUM3Q15397 648 aaKnown RBP24.53■■□□□ 1.52
SHROOM3-209ENST00000490690 TBC1D16Q8TBP0 767 aa24.53■■□□□ 1.52
SHROOM3-209ENST00000490690 PUS3Q9BZE2 481 aaKnown RBP24.53■■□□□ 1.52
SHROOM3-209ENST00000490690 ZNF804BA4D1E1 1349 aa24.53■■□□□ 1.52
SHROOM3-209ENST00000490690 CACNA1SQ13698 1873 aa24.53■■□□□ 1.52
SHROOM3-209ENST00000490690 ATG9AQ7Z3C6 839 aa24.52■■□□□ 1.52
SHROOM3-209ENST00000490690 SIRT2Q8IXJ6 389 aa24.52■■□□□ 1.52
SHROOM3-209ENST00000490690 ZC3H12CQ9C0D7 883 aaKnown RBP24.52■■□□□ 1.52
SHROOM3-209ENST00000490690 PCDHB15Q9Y5E8 787 aa24.52■■□□□ 1.52
SHROOM3-209ENST00000490690 NFKBIEO00221 500 aa24.51■■□□□ 1.51
SHROOM3-209ENST00000490690 IFIT1P09914 478 aaKnown RBP24.51■■□□□ 1.51
SHROOM3-209ENST00000490690 WASHC4Q2M389 1173 aa24.51■■□□□ 1.51
SHROOM3-209ENST00000490690 GCC1Q96CN9 775 aa24.51■■□□□ 1.51
SHROOM3-209ENST00000490690 KIF1BPQ96EK5 621 aa24.51■■□□□ 1.51
SHROOM3-209ENST00000490690 GPR108Q9NPR9 543 aa24.51■■□□□ 1.51
SHROOM3-209ENST00000490690 MED23Q9ULK4 1368 aa24.51■■□□□ 1.51
SHROOM3-209ENST00000490690 IARSP41252 1262 aaKnown RBP24.5■■□□□ 1.51
SHROOM3-209ENST00000490690 OLFM4Q6UX06 510 aa24.5■■□□□ 1.51
SHROOM3-209ENST00000490690 C15orf52Q6ZUT6 534 aaKnown RBP24.5■■□□□ 1.51
SHROOM3-209ENST00000490690 JDP2Q8WYK2 163 aa24.5■■□□□ 1.51
SHROOM3-209ENST00000490690 LPIN2Q92539 896 aa24.5■■□□□ 1.51
SHROOM3-209ENST00000490690 ZBTB47Q9UFB7 747 aaPredicted RBP24.5■■□□□ 1.51
SHROOM3-209ENST00000490690 ZC3H4Q9UPT8 1303 aaKnown RBP24.5■■□□□ 1.51
SHROOM3-209ENST00000490690 PPIP5K2O43314 1243 aa24.49■■□□□ 1.51
SHROOM3-209ENST00000490690 SLC5A1P13866 664 aa24.49■■□□□ 1.51
SHROOM3-209ENST00000490690 KIAA2012Q0VF49 1180 aa24.49■■□□□ 1.51
SHROOM3-209ENST00000490690 VGLL2Q8N8G2 317 aa24.49■■□□□ 1.51
SHROOM3-209ENST00000490690 DCTPP1Q9H773 170 aa24.49■■□□□ 1.51
SHROOM3-209ENST00000490690 G3V3G9 751 aa24.48■■□□□ 1.51
SHROOM3-209ENST00000490690 TAF1P21675 1872 aa24.48■■□□□ 1.51
SHROOM3-209ENST00000490690 DCAF8Q5TAQ9 597 aa24.48■■□□□ 1.51
SHROOM3-209ENST00000490690 LARGE2Q8N3Y3 721 aa24.48■■□□□ 1.51
SHROOM3-209ENST00000490690 POLLQ9UGP5 575 aa24.48■■□□□ 1.51
SHROOM3-209ENST00000490690 FER1L6Q2WGJ9 1857 aa24.47■■□□□ 1.51
SHROOM3-209ENST00000490690 COL4A1P02462 1669 aa24.47■■□□□ 1.51
SHROOM3-209ENST00000490690 TAF5LO75529 589 aa24.47■■□□□ 1.51
SHROOM3-209ENST00000490690 ATP2B3Q16720 1220 aa24.47■■□□□ 1.51
SHROOM3-209ENST00000490690 CAVIN4Q5BKX8 364 aa24.47■■□□□ 1.51
SHROOM3-209ENST00000490690 HELBQ8NG08 1087 aaPredicted RBP24.47■■□□□ 1.51
SHROOM3-209ENST00000490690 EXOC6BQ9Y2D4 811 aa24.47■■□□□ 1.51
SHROOM3-209ENST00000490690 ZNF804AQ7Z570 1209 aa24.46■■□□□ 1.51
SHROOM3-209ENST00000490690 CLASRPQ8N2M8 674 aaKnown RBP24.46■■□□□ 1.51
SHROOM3-209ENST00000490690 SPEF2Q9C093 1822 aa24.45■■□□□ 1.5
SHROOM3-209ENST00000490690 RASSF7Q02833 373 aa24.45■■□□□ 1.5
SHROOM3-209ENST00000490690 TFCP2Q12800 502 aa24.45■■□□□ 1.5
SHROOM3-209ENST00000490690 NIM1KQ8IY84 436 aa24.45■■□□□ 1.5
SHROOM3-209ENST00000490690 RHPN1Q8TCX5 695 aa24.45■■□□□ 1.5
SHROOM3-209ENST00000490690 LRRCC1Q9C099 1032 aa24.45■■□□□ 1.5
SHROOM3-209ENST00000490690 ZNF277Q9NRM2 450 aaPredicted RBP24.45■■□□□ 1.5
SHROOM3-209ENST00000490690 VPS37DQ86XT2 251 aa24.44■■□□□ 1.5
SHROOM3-209ENST00000490690 COA1Q9GZY4 146 aa24.44■■□□□ 1.5
SHROOM3-209ENST00000490690 LTBP1Q14766 1721 aa24.44■■□□□ 1.5
SHROOM3-209ENST00000490690 DUOX1Q9NRD9 1551 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms