RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 KIF24Q5T7B8 1368 aa14.8□□□□□ -0.04
SHOX2-205ENST00000490689 KCNG4Q8TDN1 519 aa14.8□□□□□ -0.04
SHOX2-205ENST00000490689 STAP2Q9UGK3 403 aa14.8□□□□□ -0.04
SHOX2-205ENST00000490689 AMOTL2Q9Y2J4 779 aa14.8□□□□□ -0.04
SHOX2-205ENST00000490689 CDKL5O76039 1030 aa14.8□□□□□ -0.04
SHOX2-205ENST00000490689 COPS6Q7L5N1 327 aa14.8□□□□□ -0.04
SHOX2-205ENST00000490689 LRRC59Q96AG4 307 aaKnown RBP14.8□□□□□ -0.04
SHOX2-205ENST00000490689 SEC62Q99442 399 aaKnown RBP14.8□□□□□ -0.04
SHOX2-205ENST00000490689 LGR6Q9HBX8 967 aa14.8□□□□□ -0.04
SHOX2-205ENST00000490689 CDC42BPAQ5VT25 1732 aa14.8□□□□□ -0.04
SHOX2-205ENST00000490689 PTCH1Q13635 1447 aa14.8□□□□□ -0.04
SHOX2-205ENST00000490689 XBP1P17861 261 aa14.79□□□□□ -0.04
SHOX2-205ENST00000490689 DHX32Q7L7V1 743 aaKnown RBP14.79□□□□□ -0.04
SHOX2-205ENST00000490689 XAGE3Q8WTP9 111 aa14.79□□□□□ -0.04
SHOX2-205ENST00000490689 DNA2P51530 1060 aa14.79□□□□□ -0.04
SHOX2-205ENST00000490689 STX17P56962 302 aa14.79□□□□□ -0.04
SHOX2-205ENST00000490689 TFCP2Q12800 502 aa14.79□□□□□ -0.04
SHOX2-205ENST00000490689 FBXO38Q6PIJ6 1188 aa14.79□□□□□ -0.04
SHOX2-205ENST00000490689 IPO4Q8TEX9 1081 aaKnown RBP14.79□□□□□ -0.04
SHOX2-205ENST00000490689 NUP88Q99567 741 aaPredicted RBP14.79□□□□□ -0.04
SHOX2-205ENST00000490689 FANCCQ00597 558 aa14.78□□□□□ -0.04
SHOX2-205ENST00000490689 KIAA1328Q86T90 577 aa14.78□□□□□ -0.04
SHOX2-205ENST00000490689 EAF2Q96CJ1 260 aaPredicted RBP14.78□□□□□ -0.04
SHOX2-205ENST00000490689 KCNQ3O43525 872 aa14.78□□□□□ -0.04
SHOX2-205ENST00000490689 AFMP43652 599 aa14.78□□□□□ -0.04
SHOX2-205ENST00000490689 ALG1Q9BT22 464 aa14.78□□□□□ -0.04
SHOX2-205ENST00000490689 TM6SF1Q9BZW5 370 aa14.78□□□□□ -0.04
SHOX2-205ENST00000490689 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.78□□□□□ -0.04
SHOX2-205ENST00000490689 SPTLC3Q9NUV7 552 aa14.78□□□□□ -0.04
SHOX2-205ENST00000490689 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.78□□□□□ -0.04
SHOX2-205ENST00000490689 AOX1Q06278 1338 aa14.78□□□□□ -0.04
SHOX2-205ENST00000490689 USP27XA6NNY8 438 aa14.78□□□□□ -0.04
SHOX2-205ENST00000490689 GOLGA8FQ08AF8 430 aa14.78□□□□□ -0.04
SHOX2-205ENST00000490689 GOLGA8DPQ0D2H9 430 aa14.78□□□□□ -0.04
SHOX2-205ENST00000490689 CCDC144BQ3MJ40 725 aa14.78□□□□□ -0.04
SHOX2-205ENST00000490689 SMARCC1Q92922 1105 aaPredicted RBP14.78□□□□□ -0.04
SHOX2-205ENST00000490689 CABP4P57796 275 aa14.77□□□□□ -0.04
SHOX2-205ENST00000490689 SPECC1Q5M775 1068 aa14.77□□□□□ -0.04
SHOX2-205ENST00000490689 LMBR1LQ6UX01 489 aa14.77□□□□□ -0.04
SHOX2-205ENST00000490689 IL25Q9H293 177 aa14.77□□□□□ -0.04
SHOX2-205ENST00000490689 PRDM4Q9UKN5 801 aa14.77□□□□□ -0.04
SHOX2-205ENST00000490689 OAS2P29728 719 aaKnown RBP14.77□□□□□ -0.04
SHOX2-205ENST00000490689 TIMM10P62072 90 aa14.77□□□□□ -0.04
SHOX2-205ENST00000490689 PPP2R3AQ06190 1150 aa14.77□□□□□ -0.04
SHOX2-205ENST00000490689 LINS1Q8NG48 757 aa14.77□□□□□ -0.04
SHOX2-205ENST00000490689 ZBTB3Q9H5J0 574 aa14.77□□□□□ -0.04
SHOX2-205ENST00000490689 ZNHIT6Q9NWK9 470 aaKnown RBP14.77□□□□□ -0.04
SHOX2-205ENST00000490689 FAM135BQ49AJ0 1406 aa14.77□□□□□ -0.04
SHOX2-205ENST00000490689 KIAA0232Q92628 1395 aa14.77□□□□□ -0.04
SHOX2-205ENST00000490689 TRPM2O94759 1503 aa14.77□□□□□ -0.04
SHOX2-205ENST00000490689 SSH2Q76I76 1423 aa14.77□□□□□ -0.05
SHOX2-205ENST00000490689 SEC31AO94979 1220 aaKnown RBP14.77□□□□□ -0.05
SHOX2-205ENST00000490689 IARSP41252 1262 aaKnown RBP14.77□□□□□ -0.05
SHOX2-205ENST00000490689 TDRD7Q8NHU6 1098 aaKnown RBP14.77□□□□□ -0.05
SHOX2-205ENST00000490689 DBNDD2Q9BQY9 259 aa14.77□□□□□ -0.05
SHOX2-205ENST00000490689 BRMS1Q9HCU9 246 aa14.77□□□□□ -0.05
SHOX2-205ENST00000490689 GTF2E1P29083 439 aaPredicted RBP14.77□□□□□ -0.05
SHOX2-205ENST00000490689 SLC26A6Q9BXS9 759 aa14.77□□□□□ -0.05
SHOX2-205ENST00000490689 GBP3Q9H0R5 595 aa14.77□□□□□ -0.05
SHOX2-205ENST00000490689 MAGEC2Q9UBF1 373 aaPredicted RBP14.77□□□□□ -0.05
SHOX2-205ENST00000490689 EIF5P55010 431 aaKnown RBP14.76□□□□□ -0.05
SHOX2-205ENST00000490689 IL17REQ8NFR9 667 aa14.76□□□□□ -0.05
SHOX2-205ENST00000490689 GOLGA1Q92805 767 aa14.76□□□□□ -0.05
SHOX2-205ENST00000490689 RASSF4Q9H2L5 321 aa14.76□□□□□ -0.05
SHOX2-205ENST00000490689 ST7Q9NRC1 585 aa14.76□□□□□ -0.05
SHOX2-205ENST00000490689 GOLGA8AA7E2F4 631 aa14.76□□□□□ -0.05
SHOX2-205ENST00000490689 ALDH1L1O75891 902 aa14.76□□□□□ -0.05
SHOX2-205ENST00000490689 KIAA0754O94854 1291 aa14.76□□□□□ -0.05
SHOX2-205ENST00000490689 TATP17735 454 aaPredicted RBP14.76□□□□□ -0.05
SHOX2-205ENST00000490689 MATR3P43243 847 aaKnown RBP eCLIP14.76□□□□□ -0.05
SHOX2-205ENST00000490689 METAP2P50579 478 aaKnown RBP eCLIP14.76□□□□□ -0.05
SHOX2-205ENST00000490689 SRRTQ9BXP5 876 aaKnown RBP14.76□□□□□ -0.05
SHOX2-205ENST00000490689 CLSTN1O94985 981 aa14.76□□□□□ -0.05
SHOX2-205ENST00000490689 RDXP35241 583 aaKnown RBP14.76□□□□□ -0.05
SHOX2-205ENST00000490689 TDO2P48775 406 aa14.76□□□□□ -0.05
SHOX2-205ENST00000490689 CEBPAP49715 358 aaPredicted RBP14.76□□□□□ -0.05
SHOX2-205ENST00000490689 CCDC181Q5TID7 509 aa14.76□□□□□ -0.05
SHOX2-205ENST00000490689 ANKRD13DQ6ZTN6 518 aa14.76□□□□□ -0.05
SHOX2-205ENST00000490689 CCDC47Q96A33 483 aaKnown RBP14.76□□□□□ -0.05
SHOX2-205ENST00000490689 BAG1Q99933 345 aaPredicted RBP14.76□□□□□ -0.05
SHOX2-205ENST00000490689 RABEP2Q9H5N1 569 aa14.76□□□□□ -0.05
SHOX2-205ENST00000490689 ATP7AQ04656 1500 aa14.76□□□□□ -0.05
SHOX2-205ENST00000490689 PRC1O43663 620 aa14.75□□□□□ -0.05
SHOX2-205ENST00000490689 ZNF569Q5MCW4 686 aa14.75□□□□□ -0.05
SHOX2-205ENST00000490689 SUCLG2Q96I99 432 aa14.75□□□□□ -0.05
SHOX2-205ENST00000490689 GOLGA6L9A6NEM1 432 aa14.75□□□□□ -0.05
SHOX2-205ENST00000490689 ZNF202O95125 648 aa14.75□□□□□ -0.05
SHOX2-205ENST00000490689 GTF2A1P52655 376 aaPredicted RBP14.75□□□□□ -0.05
SHOX2-205ENST00000490689 MYL5Q02045 173 aa14.75□□□□□ -0.05
SHOX2-205ENST00000490689 TERF2Q15554 542 aa14.75□□□□□ -0.05
SHOX2-205ENST00000490689 IFIT3O14879 490 aaKnown RBP14.75□□□□□ -0.05
SHOX2-205ENST00000490689 VPS37DQ86XT2 251 aa14.75□□□□□ -0.05
SHOX2-205ENST00000490689 CERS3Q8IU89 383 aa14.75□□□□□ -0.05
SHOX2-205ENST00000490689 TMEM87AQ8NBN3 555 aa14.75□□□□□ -0.05
SHOX2-205ENST00000490689 CCDC148Q8NFR7 591 aa14.75□□□□□ -0.05
SHOX2-205ENST00000490689 AIDAQ96BJ3 306 aa14.75□□□□□ -0.05
SHOX2-205ENST00000490689 TLR7Q9NYK1 1049 aaKnown RBP14.75□□□□□ -0.05
SHOX2-205ENST00000490689 DDX41Q9UJV9 622 aaKnown RBP14.75□□□□□ -0.05
SHOX2-205ENST00000490689 ABCA8O94911 1581 aa14.75□□□□□ -0.05
SHOX2-205ENST00000490689 KMT5BQ4FZB7 885 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms