RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 CA12O43570 354 aa13.26□□□□□ -0.29
TTC28-207ENST00000490475 GPSM2P81274 684 aa13.26□□□□□ -0.29
TTC28-207ENST00000490475 PAXIP1Q6ZW49 1069 aaPredicted RBP13.26□□□□□ -0.29
TTC28-207ENST00000490475 MICALL2Q8IY33 904 aa13.26□□□□□ -0.29
TTC28-207ENST00000490475 TBC1D16Q8TBP0 767 aa13.26□□□□□ -0.29
TTC28-207ENST00000490475 TSR2Q969E8 191 aaKnown RBP13.26□□□□□ -0.29
TTC28-207ENST00000490475 CAPNS2Q96L46 248 aa13.26□□□□□ -0.29
TTC28-207ENST00000490475 POLLQ9UGP5 575 aa13.26□□□□□ -0.29
TTC28-207ENST00000490475 MYH3P11055 1940 aa13.25□□□□□ -0.29
TTC28-207ENST00000490475 XDHP47989 1333 aa13.25□□□□□ -0.29
TTC28-207ENST00000490475 PSMD14O00487 310 aa13.25□□□□□ -0.29
TTC28-207ENST00000490475 ECE2O60344 883 aa13.25□□□□□ -0.29
TTC28-207ENST00000490475 CELF2O95319 508 aaKnown RBP13.25□□□□□ -0.29
TTC28-207ENST00000490475 TWISTNBQ3B726 338 aaPredicted RBP13.25□□□□□ -0.29
TTC28-207ENST00000490475 WDR63Q8IWG1 891 aa13.25□□□□□ -0.29
TTC28-207ENST00000490475 DBNDD1Q9H9R9 158 aa13.25□□□□□ -0.29
TTC28-207ENST00000490475 MAP3K2Q9Y2U5 619 aa13.25□□□□□ -0.29
TTC28-207ENST00000490475 PI4KAP2A4QPH2 592 aa13.24□□□□□ -0.29
TTC28-207ENST00000490475 RIMBP2O15034 1052 aa13.24□□□□□ -0.29
TTC28-207ENST00000490475 UFL1O94874 794 aa13.24□□□□□ -0.29
TTC28-207ENST00000490475 ATP2B4P23634 1241 aa13.24□□□□□ -0.29
TTC28-207ENST00000490475 MMP14P50281 582 aa13.24□□□□□ -0.29
TTC28-207ENST00000490475 CST9Q5W186 159 aa13.24□□□□□ -0.29
TTC28-207ENST00000490475 SAPCD2Q86UD0 394 aa13.24□□□□□ -0.29
TTC28-207ENST00000490475 SLC51AQ86UW1 340 aa13.24□□□□□ -0.29
TTC28-207ENST00000490475 PI4KAP1Q8N8J0 262 aa13.24□□□□□ -0.29
TTC28-207ENST00000490475 DCPSQ96C86 337 aaKnown RBP13.24□□□□□ -0.29
TTC28-207ENST00000490475 GPR101Q96P66 508 aaPredicted RBP13.24□□□□□ -0.29
TTC28-207ENST00000490475 SPINK5Q9NQ38 1064 aaPredicted RBP13.24□□□□□ -0.29
TTC28-207ENST00000490475 THSD7BQ9C0I4 1608 aa13.24□□□□□ -0.29
TTC28-207ENST00000490475 ZNF609O15014 1411 aa13.23□□□□□ -0.29
TTC28-207ENST00000490475 RTL9Q8NET4 1388 aa13.23□□□□□ -0.29
TTC28-207ENST00000490475 TRAF5O00463 557 aa13.23□□□□□ -0.29
TTC28-207ENST00000490475 VIL1P09327 827 aaKnown RBP13.23□□□□□ -0.29
TTC28-207ENST00000490475 CTSWP56202 376 aa13.23□□□□□ -0.29
TTC28-207ENST00000490475 PODNQ7Z5L7 613 aa13.23□□□□□ -0.29
TTC28-207ENST00000490475 TSPYL6Q8N831 410 aa13.23□□□□□ -0.29
TTC28-207ENST00000490475 AGBL3Q8NEM8 1001 aa13.23□□□□□ -0.29
TTC28-207ENST00000490475 MYH16Q9H6N6 1097 aa13.23□□□□□ -0.29
TTC28-207ENST00000490475 SLC4A2P04920 1241 aa13.22□□□□□ -0.29
TTC28-207ENST00000490475 HIRAP54198 1017 aaPredicted RBP13.22□□□□□ -0.29
TTC28-207ENST00000490475 TRPM4Q8TD43 1214 aa13.22□□□□□ -0.29
TTC28-207ENST00000490475 ZNF428Q96B54 188 aa13.22□□□□□ -0.29
TTC28-207ENST00000490475 GLIS2Q9BZE0 524 aaPredicted RBP13.22□□□□□ -0.29
TTC28-207ENST00000490475 SEC31BQ9NQW1 1179 aa13.22□□□□□ -0.29
TTC28-207ENST00000490475 BSDC1Q9NW68 430 aaPredicted RBP13.22□□□□□ -0.29
TTC28-207ENST00000490475 LBX1P52954 281 aa13.21□□□□□ -0.29
TTC28-207ENST00000490475 NOGQ13253 232 aa13.21□□□□□ -0.29
TTC28-207ENST00000490475 DOK7Q18PE1 504 aa13.21□□□□□ -0.29
TTC28-207ENST00000490475 CYP4F22Q6NT55 531 aa13.21□□□□□ -0.29
TTC28-207ENST00000490475 KRT26Q7Z3Y9 468 aa13.21□□□□□ -0.29
TTC28-207ENST00000490475 SULF1Q8IWU6 871 aa13.21□□□□□ -0.29
TTC28-207ENST00000490475 C2orf69Q8N8R5 385 aa13.21□□□□□ -0.29
TTC28-207ENST00000490475 ZBTB12Q9Y330 459 aaPredicted RBP13.21□□□□□ -0.29
TTC28-207ENST00000490475 PSME4Q14997 1843 aa13.2□□□□□ -0.3
TTC28-207ENST00000490475 NEURL1BA8MQ27 555 aa13.2□□□□□ -0.3
TTC28-207ENST00000490475 CAPN15O75808 1086 aa13.2□□□□□ -0.3
TTC28-207ENST00000490475 IGKV5-2P06315 115 aa13.2□□□□□ -0.3
TTC28-207ENST00000490475 HSPA8P11142 646 aaKnown RBP13.2□□□□□ -0.3
TTC28-207ENST00000490475 IGHMBP2P38935 993 aaKnown RBP13.2□□□□□ -0.3
TTC28-207ENST00000490475 BRPF1P55201 1214 aaPredicted RBP13.2□□□□□ -0.3
TTC28-207ENST00000490475 KIF4BQ2VIQ3 1234 aa13.2□□□□□ -0.3
TTC28-207ENST00000490475 SAMD7Q7Z3H4 446 aa13.2□□□□□ -0.3
TTC28-207ENST00000490475 TTLL11Q8NHH1 800 aa13.2□□□□□ -0.3
TTC28-207ENST00000490475 PLA2G12BQ9BX93 195 aa13.2□□□□□ -0.3
TTC28-207ENST00000490475 ZNF408Q9H9D4 720 aa13.2□□□□□ -0.3
TTC28-207ENST00000490475 POLR2AP24928 1970 aaKnown RBP13.2□□□□□ -0.3
TTC28-207ENST00000490475 MED23Q9ULK4 1368 aa13.2□□□□□ -0.3
TTC28-207ENST00000490475 MYO3BQ8WXR4 1341 aa13.19□□□□□ -0.3
TTC28-207ENST00000490475 ZNF521Q96K83 1311 aa13.19□□□□□ -0.3
TTC28-207ENST00000490475 USP17L3A6NCW0 530 aa13.19□□□□□ -0.3
TTC28-207ENST00000490475 USP17L4A6NCW7 530 aa13.19□□□□□ -0.3
TTC28-207ENST00000490475 H7C1W4 665 aa13.19□□□□□ -0.3
TTC28-207ENST00000490475 FMR1Q06787 632 aaKnown RBP eCLIP13.19□□□□□ -0.3
TTC28-207ENST00000490475 FLIIQ13045 1269 aa13.19□□□□□ -0.3
TTC28-207ENST00000490475 GRM1Q13255 1194 aa13.19□□□□□ -0.3
TTC28-207ENST00000490475 FKBP5Q13451 457 aaPredicted RBP13.19□□□□□ -0.3
TTC28-207ENST00000490475 TBC1D10BQ4KMP7 808 aaPredicted RBP13.19□□□□□ -0.3
TTC28-207ENST00000490475 RSBN1LQ6PCB5 846 aaPredicted RBP13.19□□□□□ -0.3
TTC28-207ENST00000490475 USP17L1Q7RTZ2 530 aa13.19□□□□□ -0.3
TTC28-207ENST00000490475 USP48Q86UV5 1035 aa13.19□□□□□ -0.3
TTC28-207ENST00000490475 LINS1Q8NG48 757 aa13.19□□□□□ -0.3
TTC28-207ENST00000490475 DNAAF4Q8WXU2 420 aa13.19□□□□□ -0.3
TTC28-207ENST00000490475 CCDC102AQ96A19 550 aa13.19□□□□□ -0.3
TTC28-207ENST00000490475 ANKRD2Q9GZV1 360 aa13.19□□□□□ -0.3
TTC28-207ENST00000490475 LEMD3Q9Y2U8 911 aa13.19□□□□□ -0.3
TTC28-207ENST00000490475 PITPNM2Q9BZ72 1349 aa13.18□□□□□ -0.3
TTC28-207ENST00000490475 FANCIQ9NVI1 1328 aa13.18□□□□□ -0.3
TTC28-207ENST00000490475 HUNKP57058 714 aa13.18□□□□□ -0.3
TTC28-207ENST00000490475 ZNF280AP59817 542 aaPredicted RBP13.18□□□□□ -0.3
TTC28-207ENST00000490475 EXOSC9Q06265 439 aaKnown RBP13.18□□□□□ -0.3
TTC28-207ENST00000490475 GCKRQ14397 625 aa13.18□□□□□ -0.3
TTC28-207ENST00000490475 UBE3BQ7Z3V4 1068 aa13.18□□□□□ -0.3
TTC28-207ENST00000490475 OGFOD1Q8N543 542 aa13.18□□□□□ -0.3
TTC28-207ENST00000490475 MPHOSPH8Q99549 860 aa13.18□□□□□ -0.3
TTC28-207ENST00000490475 COA1Q9GZY4 146 aa13.18□□□□□ -0.3
TTC28-207ENST00000490475 GBA2Q9HCG7 927 aaPredicted RBP13.18□□□□□ -0.3
TTC28-207ENST00000490475 SCN9AQ15858 1988 aa13.18□□□□□ -0.3
TTC28-207ENST00000490475 USP17L8P0C7I0 530 aa13.17□□□□□ -0.3
TTC28-207ENST00000490475 CCT4P50991 539 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms