RNA–Protein interactions for RNA: ENST00000490006.6

LINC01140-207, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 2

Gene LINC01140, Length 1,389 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-207ENST00000490006 LDHAL6AQ6ZMR3 332 aa13.16□□□□□ -0.3
LINC01140-207ENST00000490006 SLC51AQ86UW1 340 aa13.16□□□□□ -0.3
LINC01140-207ENST00000490006 HELBQ8NG08 1087 aaPredicted RBP13.16□□□□□ -0.3
LINC01140-207ENST00000490006 GRAPLQ8TC17 118 aaPredicted RBP13.16□□□□□ -0.3
LINC01140-207ENST00000490006 CRAMP1Q96RY5 1269 aa13.16□□□□□ -0.3
LINC01140-207ENST00000490006 CDC5LQ99459 802 aaKnown RBP13.16□□□□□ -0.3
LINC01140-207ENST00000490006 PUS3Q9BZE2 481 aaKnown RBP13.16□□□□□ -0.3
LINC01140-207ENST00000490006 N4BP2Q86UW6 1770 aaPredicted RBP13.15□□□□□ -0.3
LINC01140-207ENST00000490006 PPEF1O14829 653 aaPredicted RBP13.15□□□□□ -0.3
LINC01140-207ENST00000490006 SURF6O75683 361 aaKnown RBP13.15□□□□□ -0.3
LINC01140-207ENST00000490006 BBOX1O75936 387 aa13.15□□□□□ -0.3
LINC01140-207ENST00000490006 G3BP1Q13283 466 aaKnown RBP eCLIP13.15□□□□□ -0.3
LINC01140-207ENST00000490006 RABL6Q3YEC7 729 aaPredicted RBP13.15□□□□□ -0.3
LINC01140-207ENST00000490006 PRPF40BQ6NWY9 871 aaKnown RBP13.15□□□□□ -0.3
LINC01140-207ENST00000490006 ANKRD31Q8N7Z5 1873 aa13.15□□□□□ -0.3
LINC01140-207ENST00000490006 LRRC24Q50LG9 513 aa13.14□□□□□ -0.31
LINC01140-207ENST00000490006 SIRT2Q8IXJ6 389 aa13.14□□□□□ -0.31
LINC01140-207ENST00000490006 RPAP2Q8IXW5 612 aaPredicted RBP13.14□□□□□ -0.31
LINC01140-207ENST00000490006 DDX60Q8IY21 1712 aaKnown RBP13.14□□□□□ -0.31
LINC01140-207ENST00000490006 NRXN2Q9P2S2 1712 aa13.14□□□□□ -0.31
LINC01140-207ENST00000490006 HMMRO75330 724 aa13.13□□□□□ -0.31
LINC01140-207ENST00000490006 ARHGAP27Q6ZUM4 889 aa13.13□□□□□ -0.31
LINC01140-207ENST00000490006 ANKIB1Q9P2G1 1089 aa13.13□□□□□ -0.31
LINC01140-207ENST00000490006 NSFL1CQ9UNZ2 370 aaKnown RBP13.13□□□□□ -0.31
LINC01140-207ENST00000490006 TNRC6CQ9HCJ0 1690 aaKnown RBP13.13□□□□□ -0.31
LINC01140-207ENST00000490006 TAF5LO75529 589 aa13.12□□□□□ -0.31
LINC01140-207ENST00000490006 RFX5P48382 616 aaPredicted RBP13.12□□□□□ -0.31
LINC01140-207ENST00000490006 PTPN12Q05209 780 aaKnown RBP13.12□□□□□ -0.31
LINC01140-207ENST00000490006 EXOC6BQ9Y2D4 811 aa13.12□□□□□ -0.31
LINC01140-207ENST00000490006 MYH3P11055 1940 aa13.12□□□□□ -0.31
LINC01140-207ENST00000490006 SRCAPQ6ZRS2 3230 aa13.12□□□□□ -0.31
LINC01140-207ENST00000490006 LAMB2P55268 1798 aa13.11□□□□□ -0.31
LINC01140-207ENST00000490006 C6orf229H3BNL8 230 aa13.11□□□□□ -0.31
LINC01140-207ENST00000490006 METTL24Q5JXM2 366 aa13.11□□□□□ -0.31
LINC01140-207ENST00000490006 SP8Q8IXZ3 490 aa13.11□□□□□ -0.31
LINC01140-207ENST00000490006 SSH3Q8TE77 659 aa13.11□□□□□ -0.31
LINC01140-207ENST00000490006 RWDD1Q9H446 243 aaPredicted RBP13.11□□□□□ -0.31
LINC01140-207ENST00000490006 BSDC1Q9NW68 430 aaPredicted RBP13.11□□□□□ -0.31
LINC01140-207ENST00000490006 WTIPA6NIX2 430 aaPredicted RBP13.1□□□□□ -0.31
LINC01140-207ENST00000490006 EYA2O00167 538 aa13.1□□□□□ -0.31
LINC01140-207ENST00000490006 KCNJ4P48050 445 aa13.1□□□□□ -0.31
LINC01140-207ENST00000490006 GPSM2P81274 684 aa13.1□□□□□ -0.31
LINC01140-207ENST00000490006 B4GALNT3Q6L9W6 998 aa13.1□□□□□ -0.31
LINC01140-207ENST00000490006 GPR101Q96P66 508 aaPredicted RBP13.1□□□□□ -0.31
LINC01140-207ENST00000490006 MINPP1Q9UNW1 487 aa13.1□□□□□ -0.31
LINC01140-207ENST00000490006 ATP6V0A2Q9Y487 856 aa13.1□□□□□ -0.31
LINC01140-207ENST00000490006 SLX4Q8IY92 1834 aa13.1□□□□□ -0.31
LINC01140-207ENST00000490006 CACNA1SQ13698 1873 aa13.1□□□□□ -0.31
LINC01140-207ENST00000490006 SPDYE4A6NLX3 237 aa13.09□□□□□ -0.31
LINC01140-207ENST00000490006 SNAP23O00161 211 aa13.09□□□□□ -0.31
LINC01140-207ENST00000490006 RIMBP2O15034 1052 aa13.09□□□□□ -0.31
LINC01140-207ENST00000490006 IGHDP01880 384 aa13.09□□□□□ -0.31
LINC01140-207ENST00000490006 YBX3P16989 372 aaKnown RBP eCLIP13.09□□□□□ -0.31
LINC01140-207ENST00000490006 CHRNDQ07001 517 aa13.09□□□□□ -0.31
LINC01140-207ENST00000490006 MTX1Q13505 466 aa13.09□□□□□ -0.31
LINC01140-207ENST00000490006 DPP8Q6V1X1 898 aaPredicted RBP13.09□□□□□ -0.31
LINC01140-207ENST00000490006 MPNDQ8N594 471 aa13.09□□□□□ -0.31
LINC01140-207ENST00000490006 COPRSQ9NQ92 184 aa13.09□□□□□ -0.31
LINC01140-207ENST00000490006 CEP126Q9P2H0 1117 aa13.09□□□□□ -0.31
LINC01140-207ENST00000490006 RIC1Q4ADV7 1423 aa13.09□□□□□ -0.31
LINC01140-207ENST00000490006 SMARCA5O60264 1052 aaPredicted RBP13.08□□□□□ -0.31
LINC01140-207ENST00000490006 TFCP2Q12800 502 aa13.08□□□□□ -0.31
LINC01140-207ENST00000490006 AAMPQ13685 434 aa13.08□□□□□ -0.31
LINC01140-207ENST00000490006 C7orf43Q8WVR3 580 aa13.08□□□□□ -0.31
LINC01140-207ENST00000490006 RIPOR2Q9Y4F9 1068 aa13.08□□□□□ -0.31
LINC01140-207ENST00000490006 RTL9Q8NET4 1388 aa13.08□□□□□ -0.32
LINC01140-207ENST00000490006 IL15P40933 162 aaPredicted RBP13.07□□□□□ -0.32
LINC01140-207ENST00000490006 CCDC93Q567U6 631 aa13.07□□□□□ -0.32
LINC01140-207ENST00000490006 ATG9AQ7Z3C6 839 aa13.07□□□□□ -0.32
LINC01140-207ENST00000490006 CCDC136Q96JN2 1154 aa13.07□□□□□ -0.32
LINC01140-207ENST00000490006 NEUROD6Q96NK8 337 aa13.07□□□□□ -0.32
LINC01140-207ENST00000490006 ANKRD2Q9GZV1 360 aa13.07□□□□□ -0.32
LINC01140-207ENST00000490006 ZBTB47Q9UFB7 747 aaPredicted RBP13.07□□□□□ -0.32
LINC01140-207ENST00000490006 KIF13BQ9NQT8 1826 aa13.07□□□□□ -0.32
LINC01140-207ENST00000490006 COL11A2P13942 1736 aaPredicted RBP13.07□□□□□ -0.32
LINC01140-207ENST00000490006 G3V3G9 751 aa13.07□□□□□ -0.32
LINC01140-207ENST00000490006 UFL1O94874 794 aa13.07□□□□□ -0.32
LINC01140-207ENST00000490006 TIMM10P62072 90 aa13.07□□□□□ -0.32
LINC01140-207ENST00000490006 DCAF8Q5TAQ9 597 aa13.07□□□□□ -0.32
LINC01140-207ENST00000490006 ANKRD45Q5TZF3 282 aa13.07□□□□□ -0.32
LINC01140-207ENST00000490006 TMC4Q7Z404 712 aa13.07□□□□□ -0.32
LINC01140-207ENST00000490006 RTKN2Q8IZC4 609 aa13.07□□□□□ -0.32
LINC01140-207ENST00000490006 IL1RAPL2Q9NP60 686 aa13.07□□□□□ -0.32
LINC01140-207ENST00000490006 GGA1Q9UJY5 639 aa13.07□□□□□ -0.32
LINC01140-207ENST00000490006 COL4A1P02462 1669 aa13.07□□□□□ -0.32
LINC01140-207ENST00000490006 SPEF2Q9C093 1822 aa13.06□□□□□ -0.32
LINC01140-207ENST00000490006 RASSF7Q02833 373 aa13.06□□□□□ -0.32
LINC01140-207ENST00000490006 HSP90AB4PQ58FF6 505 aa13.06□□□□□ -0.32
LINC01140-207ENST00000490006 SOGA3Q5TF21 947 aa13.06□□□□□ -0.32
LINC01140-207ENST00000490006 CC2D2BQ6DHV5 1058 aa13.06□□□□□ -0.32
LINC01140-207ENST00000490006 ZNF277Q9NRM2 450 aaPredicted RBP13.06□□□□□ -0.32
LINC01140-207ENST00000490006 POLLQ9UGP5 575 aa13.06□□□□□ -0.32
LINC01140-207ENST00000490006 MROH5Q6ZUA9 1318 aa13.05□□□□□ -0.32
LINC01140-207ENST00000490006 CIAO1O76071 339 aa13.05□□□□□ -0.32
LINC01140-207ENST00000490006 SASH1O94885 1247 aa13.05□□□□□ -0.32
LINC01140-207ENST00000490006 ATP2B4P23634 1241 aa13.05□□□□□ -0.32
LINC01140-207ENST00000490006 DOK7Q18PE1 504 aa13.05□□□□□ -0.32
LINC01140-207ENST00000490006 TBC1D16Q8TBP0 767 aa13.05□□□□□ -0.32
LINC01140-207ENST00000490006 DCTPP1Q9H773 170 aa13.05□□□□□ -0.32
LINC01140-207ENST00000490006 NOP58Q9Y2X3 529 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms