RNA–Protein interactions for RNA: ENST00000489994.5

IFRD1-215, Transcript of interferon related developmental regulator 1, humanhuman

TSL 1 (best)

Gene IFRD1, Length 1,721 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1-215ENST00000489994 USP17L11C9JVI0 530 aa6.81□□□□□ -1.32
IFRD1-215ENST00000489994 USP17L21D6R901 530 aa6.81□□□□□ -1.32
IFRD1-215ENST00000489994 USP17L18D6R9N7 530 aa6.81□□□□□ -1.32
IFRD1-215ENST00000489994 USP17L22D6RA61 530 aa6.81□□□□□ -1.32
IFRD1-215ENST00000489994 USP17L17D6RBQ6 530 aa6.81□□□□□ -1.32
IFRD1-215ENST00000489994 USP17L19D6RCP7 530 aa6.81□□□□□ -1.32
IFRD1-215ENST00000489994 USP17L20D6RJB6 530 aa6.81□□□□□ -1.32
IFRD1-215ENST00000489994 SH3BP5O60239 455 aa6.81□□□□□ -1.32
IFRD1-215ENST00000489994 WDR4P57081 412 aaKnown RBP6.81□□□□□ -1.32
IFRD1-215ENST00000489994 USP17L24Q0WX57 530 aa6.81□□□□□ -1.32
IFRD1-215ENST00000489994 DEPDC4Q8N2C3 294 aa6.81□□□□□ -1.32
IFRD1-215ENST00000489994 ATL2Q8NHH9 583 aa6.81□□□□□ -1.32
IFRD1-215ENST00000489994 FAM200AQ8TCP9 573 aa6.81□□□□□ -1.32
IFRD1-215ENST00000489994 PAIP2Q9BPZ3 127 aaKnown RBP6.81□□□□□ -1.32
IFRD1-215ENST00000489994 PNMA2Q9UL42 364 aa6.81□□□□□ -1.32
IFRD1-215ENST00000489994 CREB3O43889 395 aa6.8□□□□□ -1.32
IFRD1-215ENST00000489994 LETM1O95202 739 aaPredicted RBP6.8□□□□□ -1.32
IFRD1-215ENST00000489994 KCNA6P17658 529 aa6.8□□□□□ -1.32
IFRD1-215ENST00000489994 DHX9Q08211 1270 aaKnown RBP6.8□□□□□ -1.32
IFRD1-215ENST00000489994 PHLDB3Q6NSJ2 640 aa6.8□□□□□ -1.32
IFRD1-215ENST00000489994 CLEC4GQ6UXB4 293 aa6.8□□□□□ -1.32
IFRD1-215ENST00000489994 CREBRFQ8IUR6 639 aa6.8□□□□□ -1.32
IFRD1-215ENST00000489994 CCDC116Q8IYX3 515 aa6.8□□□□□ -1.32
IFRD1-215ENST00000489994 RNF217Q8TC41 542 aa6.8□□□□□ -1.32
IFRD1-215ENST00000489994 CCDC85AQ96PX6 553 aaPredicted RBP6.8□□□□□ -1.32
IFRD1-215ENST00000489994 MKRN1Q9UHC7 482 aaKnown RBP6.8□□□□□ -1.32
IFRD1-215ENST00000489994 PCDHB9Q9Y5E1 797 aa6.8□□□□□ -1.32
IFRD1-215ENST00000489994 EMILIN1Q9Y6C2 1016 aa6.8□□□□□ -1.32
IFRD1-215ENST00000489994 TMEM2Q9UHN6 1383 aa6.8□□□□□ -1.32
IFRD1-215ENST00000489994 ARHGAP31Q2M1Z3 1444 aa6.8□□□□□ -1.32
IFRD1-215ENST00000489994 NKTRP30414 1462 aaKnown RBP6.8□□□□□ -1.32
IFRD1-215ENST00000489994 RAB11FIP3O75154 756 aa6.79□□□□□ -1.32
IFRD1-215ENST00000489994 NR3C2P08235 984 aa6.79□□□□□ -1.32
IFRD1-215ENST00000489994 RASA1P20936 1047 aa6.79□□□□□ -1.32
IFRD1-215ENST00000489994 ZNF787Q6DD87 383 aa6.79□□□□□ -1.32
IFRD1-215ENST00000489994 ZCRB1Q8TBF4 217 aaKnown RBP6.79□□□□□ -1.32
IFRD1-215ENST00000489994 SNRNP27Q8WVK2 155 aaKnown RBP6.79□□□□□ -1.32
IFRD1-215ENST00000489994 TRIM52Q96A61 297 aa6.79□□□□□ -1.32
IFRD1-215ENST00000489994 GTPBP4Q9BZE4 634 aaKnown RBP6.79□□□□□ -1.32
IFRD1-215ENST00000489994 ZHX1Q9UKY1 873 aaPredicted RBP6.79□□□□□ -1.32
IFRD1-215ENST00000489994 JCADQ9P266 1359 aa6.79□□□□□ -1.32
IFRD1-215ENST00000489994 EFCAB6Q5THR3 1501 aa6.79□□□□□ -1.32
IFRD1-215ENST00000489994 DUOX2Q9NRD8 1548 aa6.79□□□□□ -1.32
IFRD1-215ENST00000489994 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.79□□□□□ -1.32
IFRD1-215ENST00000489994 ZIC2O95409 532 aaPredicted RBP6.79□□□□□ -1.32
IFRD1-215ENST00000489994 TSPY4P0CV99 314 aa6.79□□□□□ -1.32
IFRD1-215ENST00000489994 TSPY10P0CW01 314 aa6.79□□□□□ -1.32
IFRD1-215ENST00000489994 TIMP2P16035 220 aa6.79□□□□□ -1.32
IFRD1-215ENST00000489994 SLFNL1Q499Z3 407 aa6.79□□□□□ -1.32
IFRD1-215ENST00000489994 CRTC2Q53ET0 693 aaPredicted RBP6.79□□□□□ -1.32
IFRD1-215ENST00000489994 RPGRIP1LQ68CZ1 1315 aa6.79□□□□□ -1.32
IFRD1-215ENST00000489994 MTERF4Q7Z6M4 381 aaKnown RBP6.79□□□□□ -1.32
IFRD1-215ENST00000489994 SMC5Q8IY18 1101 aa6.79□□□□□ -1.32
IFRD1-215ENST00000489994 ITFG2Q969R8 447 aa6.79□□□□□ -1.32
IFRD1-215ENST00000489994 FAM210AQ96ND0 272 aa6.79□□□□□ -1.32
IFRD1-215ENST00000489994 PNNQ9H307 717 aaKnown RBP6.79□□□□□ -1.32
IFRD1-215ENST00000489994 METTL14Q9HCE5 456 aaKnown RBP6.79□□□□□ -1.32
IFRD1-215ENST00000489994 ATP13A2Q9NQ11 1180 aa6.79□□□□□ -1.32
IFRD1-215ENST00000489994 PGPEP1Q9NXJ5 209 aa6.79□□□□□ -1.32
IFRD1-215ENST00000489994 EID1Q9Y6B2 187 aa6.79□□□□□ -1.32
IFRD1-215ENST00000489994 ATP5J2-PTCD1G3V325 749 aa6.78□□□□□ -1.32
IFRD1-215ENST00000489994 MAP4K4O95819 1239 aaPredicted RBP6.78□□□□□ -1.32
IFRD1-215ENST00000489994 UVSSAQ2YD98 709 aa6.78□□□□□ -1.32
IFRD1-215ENST00000489994 SEPT12Q8IYM1 358 aa6.78□□□□□ -1.32
IFRD1-215ENST00000489994 CDCA7Q9BWT1 371 aaPredicted RBP6.78□□□□□ -1.32
IFRD1-215ENST00000489994 KLF16Q9BXK1 252 aaPredicted RBP6.78□□□□□ -1.32
IFRD1-215ENST00000489994 BIN2Q9UBW5 565 aaPredicted RBP6.78□□□□□ -1.32
IFRD1-215ENST00000489994 DACH1Q9UI36 760 aa6.78□□□□□ -1.32
IFRD1-215ENST00000489994 GCC2Q8IWJ2 1684 aa6.77□□□□□ -1.33
IFRD1-215ENST00000489994 AHDC1Q5TGY3 1603 aaPredicted RBP6.77□□□□□ -1.33
IFRD1-215ENST00000489994 SOWAHDA6NJG2 315 aa6.77□□□□□ -1.33
IFRD1-215ENST00000489994 PAX3P23760 479 aa6.77□□□□□ -1.33
IFRD1-215ENST00000489994 CLP1Q92989 425 aaKnown RBP6.77□□□□□ -1.33
IFRD1-215ENST00000489994 ITPKCQ96DU7 683 aa6.77□□□□□ -1.33
IFRD1-215ENST00000489994 MRRFQ96E11 262 aaKnown RBP6.77□□□□□ -1.33
IFRD1-215ENST00000489994 DRC1Q96MC2 740 aa6.77□□□□□ -1.33
IFRD1-215ENST00000489994 SLC26A8Q96RN1 970 aa6.77□□□□□ -1.33
IFRD1-215ENST00000489994 SENP2Q9HC62 589 aa6.77□□□□□ -1.33
IFRD1-215ENST00000489994 ARHGEF10LQ9HCE6 1279 aa6.77□□□□□ -1.33
IFRD1-215ENST00000489994 JADE2Q9NQC1 790 aa6.77□□□□□ -1.33
IFRD1-215ENST00000489994 SLAIN2Q9P270 581 aa6.77□□□□□ -1.33
IFRD1-215ENST00000489994 CEP83Q9Y592 693 aa6.77□□□□□ -1.33
IFRD1-215ENST00000489994 DIP2AQ14689 1571 aa6.77□□□□□ -1.33
IFRD1-215ENST00000489994 ADGRB3O60242 1522 aa6.77□□□□□ -1.33
IFRD1-215ENST00000489994 IPO8O15397 1037 aaKnown RBP6.76□□□□□ -1.33
IFRD1-215ENST00000489994 ATP2B4P23634 1241 aa6.76□□□□□ -1.33
IFRD1-215ENST00000489994 MARSP56192 900 aaKnown RBP6.76□□□□□ -1.33
IFRD1-215ENST00000489994 PTK7Q13308 1070 aa6.76□□□□□ -1.33
IFRD1-215ENST00000489994 NCOA4Q13772 614 aa6.76□□□□□ -1.33
IFRD1-215ENST00000489994 INTS6LQ5JSJ4 861 aaKnown RBP6.76□□□□□ -1.33
IFRD1-215ENST00000489994 PPP1R26Q5T8A7 1209 aaPredicted RBP6.76□□□□□ -1.33
IFRD1-215ENST00000489994 RNF135Q8IUD6 432 aa6.76□□□□□ -1.33
IFRD1-215ENST00000489994 BCL2L13Q9BXK5 485 aa6.76□□□□□ -1.33
IFRD1-215ENST00000489994 ANAPC4Q9UJX5 808 aa6.76□□□□□ -1.33
IFRD1-215ENST00000489994 FGD6Q6ZV73 1430 aa6.76□□□□□ -1.33
IFRD1-215ENST00000489994 MSH6P52701 1360 aa6.76□□□□□ -1.33
IFRD1-215ENST00000489994 SERPINB4P48594 390 aa6.76□□□□□ -1.33
IFRD1-215ENST00000489994 RNF20Q5VTR2 975 aa6.76□□□□□ -1.33
IFRD1-215ENST00000489994 ANKMY2Q8IV38 441 aa6.76□□□□□ -1.33
IFRD1-215ENST00000489994 KIFC2Q96AC6 838 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms