RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 A0A1W2PPC1 479 aa9.88□□□□□ -0.83
COL9A1-209ENST00000489861 IGF2BP3O00425 579 aaKnown RBP eCLIP9.88□□□□□ -0.83
COL9A1-209ENST00000489861 NTSR2O95665 410 aa9.88□□□□□ -0.83
COL9A1-209ENST00000489861 ALDH1A1P00352 501 aa9.88□□□□□ -0.83
COL9A1-209ENST00000489861 PTPN12Q05209 780 aaKnown RBP9.88□□□□□ -0.83
COL9A1-209ENST00000489861 IFNL1Q8IU54 200 aa9.88□□□□□ -0.83
COL9A1-209ENST00000489861 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.88□□□□□ -0.83
COL9A1-209ENST00000489861 DEFB123Q8N688 67 aa9.88□□□□□ -0.83
COL9A1-209ENST00000489861 SHISA4Q96DD7 197 aa9.88□□□□□ -0.83
COL9A1-209ENST00000489861 PTCH2Q9Y6C5 1203 aa9.88□□□□□ -0.83
COL9A1-209ENST00000489861 EYSQ5T1H1 3165 aa9.88□□□□□ -0.83
COL9A1-209ENST00000489861 PSME4Q14997 1843 aa9.88□□□□□ -0.83
COL9A1-209ENST00000489861 MUC3AQ02505 3323 aa9.88□□□□□ -0.83
COL9A1-209ENST00000489861 NCOR1O75376 2440 aa9.87□□□□□ -0.83
COL9A1-209ENST00000489861 ZNF646O15015 1829 aaPredicted RBP9.87□□□□□ -0.83
COL9A1-209ENST00000489861 BBOX1O75936 387 aa9.87□□□□□ -0.83
COL9A1-209ENST00000489861 TTLL12Q14166 644 aaPredicted RBP9.87□□□□□ -0.83
COL9A1-209ENST00000489861 SLC9C1Q4G0N8 1177 aa9.87□□□□□ -0.83
COL9A1-209ENST00000489861 SPRYD7Q5W111 196 aa9.87□□□□□ -0.83
COL9A1-209ENST00000489861 MTMR10Q9NXD2 777 aa9.87□□□□□ -0.83
COL9A1-209ENST00000489861 RAPGEFL1Q9UHV5 662 aa9.87□□□□□ -0.83
COL9A1-209ENST00000489861 ALPK3Q96L96 1907 aa9.87□□□□□ -0.83
COL9A1-209ENST00000489861 BTBD11A6QL63 1104 aa9.86□□□□□ -0.83
COL9A1-209ENST00000489861 RIMBP2O15034 1052 aa9.86□□□□□ -0.83
COL9A1-209ENST00000489861 ZBTB7BO15156 539 aaPredicted RBP9.86□□□□□ -0.83
COL9A1-209ENST00000489861 SNRPA1P09661 255 aaKnown RBP9.86□□□□□ -0.83
COL9A1-209ENST00000489861 COL9A1P20849 921 aa9.86□□□□□ -0.83
COL9A1-209ENST00000489861 ZNF280AP59817 542 aaPredicted RBP9.86□□□□□ -0.83
COL9A1-209ENST00000489861 CRHR2Q13324 411 aa9.86□□□□□ -0.83
COL9A1-209ENST00000489861 NGEFQ8N5V2 710 aa9.86□□□□□ -0.83
COL9A1-209ENST00000489861 NLRP3Q96P20 1036 aa9.86□□□□□ -0.83
COL9A1-209ENST00000489861 CEMIPQ8WUJ3 1361 aa9.86□□□□□ -0.83
COL9A1-209ENST00000489861 MAP3K15Q6ZN16 1313 aa9.85□□□□□ -0.83
COL9A1-209ENST00000489861 GNAT3A8MTJ3 354 aa9.85□□□□□ -0.83
COL9A1-209ENST00000489861 ERVV-1B6SEH8 477 aa9.85□□□□□ -0.83
COL9A1-209ENST00000489861 ECE2O60344 883 aa9.85□□□□□ -0.83
COL9A1-209ENST00000489861 VIL1P09327 827 aaKnown RBP9.85□□□□□ -0.83
COL9A1-209ENST00000489861 DOK7Q18PE1 504 aa9.85□□□□□ -0.83
COL9A1-209ENST00000489861 WASHC4Q2M389 1173 aa9.85□□□□□ -0.83
COL9A1-209ENST00000489861 TTLL7Q6ZT98 887 aa9.85□□□□□ -0.83
COL9A1-209ENST00000489861 UBE2Q1Q7Z7E8 422 aa9.85□□□□□ -0.83
COL9A1-209ENST00000489861 NBPF11Q86T75 865 aa9.85□□□□□ -0.83
COL9A1-209ENST00000489861 ZNF34Q8IZ26 560 aa9.85□□□□□ -0.83
COL9A1-209ENST00000489861 SH3TC2Q8TF17 1288 aa9.85□□□□□ -0.83
COL9A1-209ENST00000489861 COL4A1P02462 1669 aa9.84□□□□□ -0.83
COL9A1-209ENST00000489861 SP3Q02447 781 aa9.84□□□□□ -0.83
COL9A1-209ENST00000489861 TCIRG1Q13488 830 aa9.84□□□□□ -0.83
COL9A1-209ENST00000489861 PRKG1Q13976 671 aa9.84□□□□□ -0.83
COL9A1-209ENST00000489861 SLC10A5Q5PT55 438 aa9.84□□□□□ -0.83
COL9A1-209ENST00000489861 LDLRAD1Q5T700 205 aa9.84□□□□□ -0.83
COL9A1-209ENST00000489861 GPR153Q6NV75 609 aa9.84□□□□□ -0.83
COL9A1-209ENST00000489861 POTEHQ6S545 545 aa9.84□□□□□ -0.83
COL9A1-209ENST00000489861 STAP2Q9UGK3 403 aa9.84□□□□□ -0.83
COL9A1-209ENST00000489861 POLLQ9UGP5 575 aa9.84□□□□□ -0.83
COL9A1-209ENST00000489861 FZD1Q9UP38 647 aa9.84□□□□□ -0.83
COL9A1-209ENST00000489861 LAMA2P24043 3122 aaKnown RBP9.83□□□□□ -0.84
COL9A1-209ENST00000489861 MANSC4A6NHS7 340 aaPredicted RBP9.83□□□□□ -0.84
COL9A1-209ENST00000489861 INHBEP58166 350 aa9.83□□□□□ -0.84
COL9A1-209ENST00000489861 ANKRD13DQ6ZTN6 518 aa9.83□□□□□ -0.84
COL9A1-209ENST00000489861 MORC1Q86VD1 984 aa9.83□□□□□ -0.84
COL9A1-209ENST00000489861 ZBTB3Q9H5J0 574 aa9.83□□□□□ -0.84
COL9A1-209ENST00000489861 GRAPQ13588 217 aa9.82□□□□□ -0.84
COL9A1-209ENST00000489861 MTFR1Q15390 333 aa9.82□□□□□ -0.84
COL9A1-209ENST00000489861 NBPF9Q3BBW0 867 aa9.82□□□□□ -0.84
COL9A1-209ENST00000489861 GRAPLQ8TC17 118 aaPredicted RBP9.82□□□□□ -0.84
COL9A1-209ENST00000489861 GMLQ99445 158 aa9.82□□□□□ -0.84
COL9A1-209ENST00000489861 MYOZ2Q9NPC6 264 aa9.82□□□□□ -0.84
COL9A1-209ENST00000489861 TIMELESSQ9UNS1 1208 aa9.82□□□□□ -0.84
COL9A1-209ENST00000489861 NR2E3Q9Y5X4 410 aa9.82□□□□□ -0.84
COL9A1-209ENST00000489861 HCLS1P14317 486 aaPredicted RBP9.81□□□□□ -0.84
COL9A1-209ENST00000489861 CLMNQ96JQ2 1002 aa9.81□□□□□ -0.84
COL9A1-209ENST00000489861 PTPN18Q99952 460 aa9.81□□□□□ -0.84
COL9A1-209ENST00000489861 HTATIP2Q9BUP3 242 aa9.81□□□□□ -0.84
COL9A1-209ENST00000489861 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.81□□□□□ -0.84
COL9A1-209ENST00000489861 NSFL1CQ9UNZ2 370 aaKnown RBP9.81□□□□□ -0.84
COL9A1-209ENST00000489861 PIEZO1Q92508 2521 aa9.81□□□□□ -0.84
COL9A1-209ENST00000489861 CLSPNQ9HAW4 1339 aa9.81□□□□□ -0.84
COL9A1-209ENST00000489861 C6orf229H3BNL8 230 aa9.8□□□□□ -0.84
COL9A1-209ENST00000489861 PLA2G5P39877 138 aa9.8□□□□□ -0.84
COL9A1-209ENST00000489861 GPSM2P81274 684 aa9.8□□□□□ -0.84
COL9A1-209ENST00000489861 RSBN1LQ6PCB5 846 aaPredicted RBP9.8□□□□□ -0.84
COL9A1-209ENST00000489861 ARMC9Q7Z3E5 817 aa9.8□□□□□ -0.84
COL9A1-209ENST00000489861 PPP1R42Q7Z4L9 355 aa9.8□□□□□ -0.84
COL9A1-209ENST00000489861 AGBL3Q8NEM8 1001 aa9.8□□□□□ -0.84
COL9A1-209ENST00000489861 WNK4Q96J92 1243 aa9.8□□□□□ -0.84
COL9A1-209ENST00000489861 ANGEL1Q9UNK9 670 aaKnown RBP9.8□□□□□ -0.84
COL9A1-209ENST00000489861 USP17L8P0C7I0 530 aa9.79□□□□□ -0.84
COL9A1-209ENST00000489861 ZBTB48P10074 688 aaPredicted RBP9.79□□□□□ -0.84
COL9A1-209ENST00000489861 NF2P35240 595 aa9.79□□□□□ -0.84
COL9A1-209ENST00000489861 GJA5P36382 358 aa9.79□□□□□ -0.84
COL9A1-209ENST00000489861 GIGYF2Q6Y7W6 1299 aaKnown RBP9.79□□□□□ -0.84
COL9A1-209ENST00000489861 DDX46Q7L014 1031 aaKnown RBP9.79□□□□□ -0.84
COL9A1-209ENST00000489861 GAS2L2Q8NHY3 880 aa9.79□□□□□ -0.84
COL9A1-209ENST00000489861 SLC10A4Q96EP9 437 aa9.79□□□□□ -0.84
COL9A1-209ENST00000489861 UTP14AQ9BVJ6 771 aaKnown RBP9.79□□□□□ -0.84
COL9A1-209ENST00000489861 ARHGAP39Q9C0H5 1083 aa9.79□□□□□ -0.84
COL9A1-209ENST00000489861 PANK3Q9H999 370 aa9.79□□□□□ -0.84
COL9A1-209ENST00000489861 BCAMP50895 628 aa9.78□□□□□ -0.84
COL9A1-209ENST00000489861 PARP10Q53GL7 1025 aa9.78□□□□□ -0.84
COL9A1-209ENST00000489861 KIF6Q6ZMV9 814 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms