RNA–Protein interactions for RNA: ENST00000489421.1

SCMH1-216, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 3

Gene SCMH1, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-216ENST00000489421 MYH16Q9H6N6 1097 aa9.27□□□□□ -0.93
SCMH1-216ENST00000489421 RCAN3Q9UKA8 241 aa9.27□□□□□ -0.93
SCMH1-216ENST00000489421 PLEKHG2Q9H7P9 1386 aa9.26□□□□□ -0.93
SCMH1-216ENST00000489421 CCNYL3P0C7X3 344 aa9.26□□□□□ -0.93
SCMH1-216ENST00000489421 KCNQ4P56696 695 aa9.26□□□□□ -0.93
SCMH1-216ENST00000489421 PTPRNQ16849 979 aa9.26□□□□□ -0.93
SCMH1-216ENST00000489421 AMOTQ4VCS5 1084 aa9.26□□□□□ -0.93
SCMH1-216ENST00000489421 RIC3Q7Z5B4 369 aa9.26□□□□□ -0.93
SCMH1-216ENST00000489421 DDX54Q8TDD1 881 aaKnown RBP9.26□□□□□ -0.93
SCMH1-216ENST00000489421 AAASQ9NRG9 546 aa9.26□□□□□ -0.93
SCMH1-216ENST00000489421 IFT57Q9NWB7 429 aa9.26□□□□□ -0.93
SCMH1-216ENST00000489421 GTF3C3Q9Y5Q9 886 aa9.26□□□□□ -0.93
SCMH1-216ENST00000489421 GOLGB1Q14789 3259 aaKnown RBP9.25□□□□□ -0.93
SCMH1-216ENST00000489421 SPDYE5A6NIY4 337 aa9.25□□□□□ -0.93
SCMH1-216ENST00000489421 CFAP99D6REC4 459 aa9.25□□□□□ -0.93
SCMH1-216ENST00000489421 CYP27B1O15528 508 aa9.25□□□□□ -0.93
SCMH1-216ENST00000489421 AVPP01185 164 aa9.25□□□□□ -0.93
SCMH1-216ENST00000489421 WNT7BP56706 349 aa9.25□□□□□ -0.93
SCMH1-216ENST00000489421 PLEKHO1Q53GL0 409 aaPredicted RBP9.25□□□□□ -0.93
SCMH1-216ENST00000489421 MYSM1Q5VVJ2 828 aa9.25□□□□□ -0.93
SCMH1-216ENST00000489421 ZNF787Q6DD87 383 aa9.25□□□□□ -0.93
SCMH1-216ENST00000489421 LIMD1Q9UGP4 676 aa9.25□□□□□ -0.93
SCMH1-216ENST00000489421 N4BP2Q86UW6 1770 aaPredicted RBP9.24□□□□□ -0.93
SCMH1-216ENST00000489421 TTC24A2A3L6 582 aaPredicted RBP9.24□□□□□ -0.93
SCMH1-216ENST00000489421 GNAT3A8MTJ3 354 aa9.24□□□□□ -0.93
SCMH1-216ENST00000489421 POTECB2RU33 542 aa9.24□□□□□ -0.93
SCMH1-216ENST00000489421 CHL1O00533 1208 aa9.24□□□□□ -0.93
SCMH1-216ENST00000489421 CT47B1P0C2W7 299 aaPredicted RBP9.24□□□□□ -0.93
SCMH1-216ENST00000489421 SMPD1P17405 629 aa9.24□□□□□ -0.93
SCMH1-216ENST00000489421 GNAI1P63096 354 aa9.24□□□□□ -0.93
SCMH1-216ENST00000489421 RC3H1Q5TC82 1133 aaKnown RBP9.24□□□□□ -0.93
SCMH1-216ENST00000489421 DESI1Q6ICB0 168 aa9.24□□□□□ -0.93
SCMH1-216ENST00000489421 ZCRB1Q8TBF4 217 aaKnown RBP9.24□□□□□ -0.93
SCMH1-216ENST00000489421 THUMPD2Q9BTF0 503 aaKnown RBP9.24□□□□□ -0.93
SCMH1-216ENST00000489421 FANCIQ9NVI1 1328 aa9.24□□□□□ -0.93
SCMH1-216ENST00000489421 AFDNP55196 1824 aaKnown RBP9.24□□□□□ -0.93
SCMH1-216ENST00000489421 J3QL48 77 aa9.23□□□□□ -0.93
SCMH1-216ENST00000489421 DCTN1Q14203 1278 aa9.23□□□□□ -0.93
SCMH1-216ENST00000489421 SLC15A2Q16348 729 aa9.23□□□□□ -0.93
SCMH1-216ENST00000489421 CSPP1Q1MSJ5 1256 aa9.23□□□□□ -0.93
SCMH1-216ENST00000489421 AKAP4Q5JQC9 854 aa9.23□□□□□ -0.93
SCMH1-216ENST00000489421 NBPF14Q5TI25 921 aa9.23□□□□□ -0.93
SCMH1-216ENST00000489421 MCM10Q7L590 875 aa9.23□□□□□ -0.93
SCMH1-216ENST00000489421 CRIPAKQ8N1N5 446 aa9.23□□□□□ -0.93
SCMH1-216ENST00000489421 IL17REQ8NFR9 667 aa9.23□□□□□ -0.93
SCMH1-216ENST00000489421 SNIP1Q8TAD8 396 aaKnown RBP9.23□□□□□ -0.93
SCMH1-216ENST00000489421 RAPGEF4Q8WZA2 1011 aa9.23□□□□□ -0.93
SCMH1-216ENST00000489421 RTF1Q92541 710 aaKnown RBP9.23□□□□□ -0.93
SCMH1-216ENST00000489421 EVA1BQ9NVM1 165 aa9.23□□□□□ -0.93
SCMH1-216ENST00000489421 MAP3K5Q99683 1374 aa9.23□□□□□ -0.93
SCMH1-216ENST00000489421 KDM6AO15550 1401 aaPredicted RBP9.22□□□□□ -0.93
SCMH1-216ENST00000489421 ZBTB7AO95365 584 aa9.22□□□□□ -0.93
SCMH1-216ENST00000489421 TATP17735 454 aaPredicted RBP9.22□□□□□ -0.93
SCMH1-216ENST00000489421 TSR2Q969E8 191 aaKnown RBP9.22□□□□□ -0.93
SCMH1-216ENST00000489421 UNC93B1Q9H1C4 597 aa9.22□□□□□ -0.93
SCMH1-216ENST00000489421 ZBTB3Q9H5J0 574 aa9.22□□□□□ -0.93
SCMH1-216ENST00000489421 BABAM1Q9NWV8 329 aa9.22□□□□□ -0.93
SCMH1-216ENST00000489421 DACH1Q9UI36 760 aa9.22□□□□□ -0.93
SCMH1-216ENST00000489421 CEMIPQ8WUJ3 1361 aa9.22□□□□□ -0.93
SCMH1-216ENST00000489421 RRP1P56182 461 aaKnown RBP9.21□□□□□ -0.94
SCMH1-216ENST00000489421 EXOSC9Q06265 439 aaKnown RBP9.21□□□□□ -0.94
SCMH1-216ENST00000489421 KCNH2Q12809 1159 aa9.21□□□□□ -0.94
SCMH1-216ENST00000489421 QPCTQ16769 361 aa9.21□□□□□ -0.94
SCMH1-216ENST00000489421 PRPF38BQ5VTL8 546 aaKnown RBP9.21□□□□□ -0.94
SCMH1-216ENST00000489421 ERICH6BQ5W0A0 696 aa9.21□□□□□ -0.94
SCMH1-216ENST00000489421 ZNF530Q6P9A1 599 aaPredicted RBP9.21□□□□□ -0.94
SCMH1-216ENST00000489421 MBIPQ9NS73 344 aa9.21□□□□□ -0.94
SCMH1-216ENST00000489421 PNPLA7Q6ZV29 1317 aa9.21□□□□□ -0.94
SCMH1-216ENST00000489421 PCDH11XQ9BZA7 1347 aa9.21□□□□□ -0.94
SCMH1-216ENST00000489421 PCDH11YQ9BZA8 1340 aa9.21□□□□□ -0.94
SCMH1-216ENST00000489421 CACNA1SQ13698 1873 aa9.2□□□□□ -0.94
SCMH1-216ENST00000489421 NEFLP07196 543 aa9.2□□□□□ -0.94
SCMH1-216ENST00000489421 RARSP54136 660 aaKnown RBP9.2□□□□□ -0.94
SCMH1-216ENST00000489421 SH3BP2P78314 561 aa9.2□□□□□ -0.94
SCMH1-216ENST00000489421 LYPD8Q6UX82 237 aa9.2□□□□□ -0.94
SCMH1-216ENST00000489421 AMIGO3Q86WK7 504 aa9.2□□□□□ -0.94
SCMH1-216ENST00000489421 ZNF428Q96B54 188 aa9.2□□□□□ -0.94
SCMH1-216ENST00000489421 SYTL4Q96C24 671 aaPredicted RBP9.2□□□□□ -0.94
SCMH1-216ENST00000489421 SPON1Q9HCB6 807 aa9.2□□□□□ -0.94
SCMH1-216ENST00000489421 SPG7Q9UQ90 795 aa9.2□□□□□ -0.94
SCMH1-216ENST00000489421 MRC1P22897 1456 aa9.2□□□□□ -0.94
SCMH1-216ENST00000489421 CCDC88AQ3V6T2 1871 aa9.19□□□□□ -0.94
SCMH1-216ENST00000489421 RNMTO43148 476 aaKnown RBP9.19□□□□□ -0.94
SCMH1-216ENST00000489421 VAMP4O75379 141 aa9.19□□□□□ -0.94
SCMH1-216ENST00000489421 PHKG2P15735 406 aa9.19□□□□□ -0.94
SCMH1-216ENST00000489421 TAF7Q15545 349 aaPredicted RBP9.19□□□□□ -0.94
SCMH1-216ENST00000489421 LINC01559Q495D7 138 aa9.19□□□□□ -0.94
SCMH1-216ENST00000489421 C1orf141Q5JVX7 400 aa9.19□□□□□ -0.94
SCMH1-216ENST00000489421 LGR6Q9HBX8 967 aa9.19□□□□□ -0.94
SCMH1-216ENST00000489421 STK32BQ9NY57 414 aa9.19□□□□□ -0.94
SCMH1-216ENST00000489421 LAS1LQ9Y4W2 734 aaKnown RBP9.19□□□□□ -0.94
SCMH1-216ENST00000489421 PALLDQ8WX93 1383 aa9.19□□□□□ -0.94
SCMH1-216ENST00000489421 SIAH2O43255 324 aa9.18□□□□□ -0.94
SCMH1-216ENST00000489421 BCAR3O75815 825 aa9.18□□□□□ -0.94
SCMH1-216ENST00000489421 SMCPP49901 116 aaPredicted RBP9.18□□□□□ -0.94
SCMH1-216ENST00000489421 BRPF1P55201 1214 aaPredicted RBP9.18□□□□□ -0.94
SCMH1-216ENST00000489421 TUSC1Q2TAM9 212 aa9.18□□□□□ -0.94
SCMH1-216ENST00000489421 IFNL2Q8IZJ0 200 aa9.18□□□□□ -0.94
SCMH1-216ENST00000489421 BAP1Q92560 729 aa9.18□□□□□ -0.94
SCMH1-216ENST00000489421 GPBP1L1Q9HC44 474 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms