RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 DDX46Q7L014 1031 aaKnown RBP25.58■■□□□ 1.69
SND1-214ENST00000489417 SPEF2Q9C093 1822 aa25.58■■□□□ 1.69
SND1-214ENST00000489417 PI4K2BQ8TCG2 481 aa25.57■■□□□ 1.68
SND1-214ENST00000489417 DBNLQ9UJU6 430 aaKnown RBP25.57■■□□□ 1.68
SND1-214ENST00000489417 ERC2O15083 957 aa25.56■■□□□ 1.68
SND1-214ENST00000489417 VGLL2Q8N8G2 317 aa25.56■■□□□ 1.68
SND1-214ENST00000489417 CELF1Q92879 486 aaKnown RBP25.56■■□□□ 1.68
SND1-214ENST00000489417 TSHZ2Q9NRE2 1034 aa25.56■■□□□ 1.68
SND1-214ENST00000489417 A0A1B0GUL7 405 aa25.55■■□□□ 1.68
SND1-214ENST00000489417 CRY2Q49AN0 593 aa25.55■■□□□ 1.68
SND1-214ENST00000489417 SLC16A10Q8TF71 515 aa25.55■■□□□ 1.68
SND1-214ENST00000489417 NEUROD6Q96NK8 337 aa25.55■■□□□ 1.68
SND1-214ENST00000489417 DBNDD2Q9BQY9 259 aa25.55■■□□□ 1.68
SND1-214ENST00000489417 PDGFDQ9GZP0 370 aaPredicted RBP25.55■■□□□ 1.68
SND1-214ENST00000489417 GLRX3O76003 335 aaKnown RBP25.54■■□□□ 1.68
SND1-214ENST00000489417 PDE8BO95263 885 aa25.54■■□□□ 1.68
SND1-214ENST00000489417 SDSP20132 328 aa25.54■■□□□ 1.68
SND1-214ENST00000489417 TIMM10P62072 90 aa25.54■■□□□ 1.68
SND1-214ENST00000489417 RPS8P62241 208 aaKnown RBP25.54■■□□□ 1.68
SND1-214ENST00000489417 RPGRQ92834 1020 aaKnown RBP25.54■■□□□ 1.68
SND1-214ENST00000489417 BRIP1Q9BX63 1249 aa25.54■■□□□ 1.68
SND1-214ENST00000489417 BSDC1Q9NW68 430 aaPredicted RBP25.54■■□□□ 1.68
SND1-214ENST00000489417 KLRG2A4D1S0 409 aaPredicted RBP25.54■■□□□ 1.68
SND1-214ENST00000489417 ATP2B3Q16720 1220 aa25.54■■□□□ 1.68
SND1-214ENST00000489417 ANKRD31Q8N7Z5 1873 aa25.53■■□□□ 1.68
SND1-214ENST00000489417 TAF1P21675 1872 aa25.52■■□□□ 1.68
SND1-214ENST00000489417 GRAPQ13588 217 aa25.52■■□□□ 1.68
SND1-214ENST00000489417 HELBQ8NG08 1087 aaPredicted RBP25.52■■□□□ 1.68
SND1-214ENST00000489417 GRAPLQ8TC17 118 aaPredicted RBP25.52■■□□□ 1.68
SND1-214ENST00000489417 RBM17Q96I25 401 aaKnown RBP25.52■■□□□ 1.68
SND1-214ENST00000489417 CHRNDQ07001 517 aa25.51■■□□□ 1.67
SND1-214ENST00000489417 PUM3Q15397 648 aaKnown RBP25.51■■□□□ 1.67
SND1-214ENST00000489417 CDC45O75419 566 aa25.5■■□□□ 1.67
SND1-214ENST00000489417 TRIM6-TRIM34B2RNG4 842 aa25.49■■□□□ 1.67
SND1-214ENST00000489417 ATP5JP18859 108 aa25.49■■□□□ 1.67
SND1-214ENST00000489417 FGFR2P21802 821 aa25.49■■□□□ 1.67
SND1-214ENST00000489417 HOXA10P31260 410 aaPredicted RBP25.49■■□□□ 1.67
SND1-214ENST00000489417 PDE6BP35913 854 aa25.49■■□□□ 1.67
SND1-214ENST00000489417 XAGE2Q96GT9 111 aa25.49■■□□□ 1.67
SND1-214ENST00000489417 TAF5LO75529 589 aa25.48■■□□□ 1.67
SND1-214ENST00000489417 ADORA1P30542 326 aa25.48■■□□□ 1.67
SND1-214ENST00000489417 LPIN2Q92539 896 aa25.48■■□□□ 1.67
SND1-214ENST00000489417 MINPP1Q9UNW1 487 aa25.48■■□□□ 1.67
SND1-214ENST00000489417 A0A1B0GUL6 1792 aa25.48■■□□□ 1.67
SND1-214ENST00000489417 GORABQ5T7V8 394 aa25.47■■□□□ 1.67
SND1-214ENST00000489417 RILPL2Q969X0 211 aa25.47■■□□□ 1.67
SND1-214ENST00000489417 CRAMP1Q96RY5 1269 aa25.47■■□□□ 1.67
SND1-214ENST00000489417 ARAP2Q8WZ64 1704 aa25.47■■□□□ 1.67
SND1-214ENST00000489417 MAP4K4O95819 1239 aaPredicted RBP25.46■■□□□ 1.67
SND1-214ENST00000489417 SLC5A1P13866 664 aa25.46■■□□□ 1.67
SND1-214ENST00000489417 BOLA2Q9H3K6 86 aa25.46■■□□□ 1.67
SND1-214ENST00000489417 TBC1D9Q6ZT07 1266 aa25.46■■□□□ 1.67
SND1-214ENST00000489417 CNTROBQ8N137 903 aa25.46■■□□□ 1.67
SND1-214ENST00000489417 ANKRD2Q9GZV1 360 aa25.46■■□□□ 1.67
SND1-214ENST00000489417 IFIT1P09914 478 aaKnown RBP25.45■■□□□ 1.66
SND1-214ENST00000489417 NPR1P16066 1061 aa25.45■■□□□ 1.66
SND1-214ENST00000489417 CCDC158Q5M9N0 1113 aa25.45■■□□□ 1.66
SND1-214ENST00000489417 SRGNP10124 158 aa25.44■■□□□ 1.66
SND1-214ENST00000489417 R3HDM1Q15032 1099 aaKnown RBP25.44■■□□□ 1.66
SND1-214ENST00000489417 COL11A2P13942 1736 aaPredicted RBP25.43■■□□□ 1.66
SND1-214ENST00000489417 BBOX1O75936 387 aa25.43■■□□□ 1.66
SND1-214ENST00000489417 UBE4AQ14139 1066 aa25.43■■□□□ 1.66
SND1-214ENST00000489417 TTC39AQ5SRH9 613 aa25.43■■□□□ 1.66
SND1-214ENST00000489417 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.43■■□□□ 1.66
SND1-214ENST00000489417 SNAP23O00161 211 aa25.42■■□□□ 1.66
SND1-214ENST00000489417 CASC1Q6TDU7 716 aa25.42■■□□□ 1.66
SND1-214ENST00000489417 EVI5LQ96CN4 794 aa25.42■■□□□ 1.66
SND1-214ENST00000489417 HAUS7Q99871 368 aa25.42■■□□□ 1.66
SND1-214ENST00000489417 C2CD5Q86YS7 1000 aa25.41■■□□□ 1.66
SND1-214ENST00000489417 MASTLQ96GX5 879 aa25.41■■□□□ 1.66
SND1-214ENST00000489417 C10orf71Q711Q0 1435 aa25.41■■□□□ 1.66
SND1-214ENST00000489417 ZBTB7AO95365 584 aa25.4■■□□□ 1.66
SND1-214ENST00000489417 SEC24BO95487 1268 aa25.4■■□□□ 1.66
SND1-214ENST00000489417 TMC4Q7Z404 712 aa25.4■■□□□ 1.66
SND1-214ENST00000489417 MTFR1LQ9H019 292 aa25.4■■□□□ 1.66
SND1-214ENST00000489417 AK9Q5TCS8 1911 aa25.39■■□□□ 1.65
SND1-214ENST00000489417 H0YIN7 160 aa25.38■■□□□ 1.65
SND1-214ENST00000489417 ALDH1B1P30837 517 aa25.38■■□□□ 1.65
SND1-214ENST00000489417 KCNJ4P48050 445 aa25.38■■□□□ 1.65
SND1-214ENST00000489417 CCDC102BQ68D86 513 aa25.38■■□□□ 1.65
SND1-214ENST00000489417 ZNF512BQ96KM6 892 aaPredicted RBP25.38■■□□□ 1.65
SND1-214ENST00000489417 DNAJC2Q99543 621 aaKnown RBP25.38■■□□□ 1.65
SND1-214ENST00000489417 PPEF1O14829 653 aaPredicted RBP25.37■■□□□ 1.65
SND1-214ENST00000489417 UQCRFS1P1P0C7P4 283 aa25.37■■□□□ 1.65
SND1-214ENST00000489417 CHMLP26374 656 aa25.37■■□□□ 1.65
SND1-214ENST00000489417 PHKA1P46020 1223 aa25.37■■□□□ 1.65
SND1-214ENST00000489417 STYK1Q6J9G0 422 aa25.37■■□□□ 1.65
SND1-214ENST00000489417 ARID4AP29374 1257 aaPredicted RBP25.37■■□□□ 1.65
SND1-214ENST00000489417 XDHP47989 1333 aa25.36■■□□□ 1.65
SND1-214ENST00000489417 LRRC37AA6NMS7 1700 aa25.36■■□□□ 1.65
SND1-214ENST00000489417 EIF5BO60841 1220 aaKnown RBP25.36■■□□□ 1.65
SND1-214ENST00000489417 POLD1P28340 1107 aa25.36■■□□□ 1.65
SND1-214ENST00000489417 SLC51AQ86UW1 340 aa25.36■■□□□ 1.65
SND1-214ENST00000489417 ZNF622Q969S3 477 aaKnown RBP eCLIP25.36■■□□□ 1.65
SND1-214ENST00000489417 EDC3Q96F86 508 aaKnown RBP25.36■■□□□ 1.65
SND1-214ENST00000489417 ANKIB1Q9P2G1 1089 aa25.36■■□□□ 1.65
SND1-214ENST00000489417 ATF5Q9Y2D1 282 aaPredicted RBP25.36■■□□□ 1.65
SND1-214ENST00000489417 LEMD3Q9Y2U8 911 aa25.36■■□□□ 1.65
SND1-214ENST00000489417 NDUFB9Q9Y6M9 179 aa25.36■■□□□ 1.65
SND1-214ENST00000489417 ZNF804BA4D1E1 1349 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms