RNA–Protein interactions for RNA: ENST00000489333.1

GABRE-210, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-210ENST00000489333 PRPF40AO75400 957 aaKnown RBP10.33□□□□□ -0.76
GABRE-210ENST00000489333 EIF2S2P20042 333 aaKnown RBP10.33□□□□□ -0.76
GABRE-210ENST00000489333 G3BP1Q13283 466 aaKnown RBP eCLIP10.33□□□□□ -0.76
GABRE-210ENST00000489333 KRT32Q14532 448 aa10.33□□□□□ -0.76
GABRE-210ENST00000489333 CAVIN1Q6NZI2 390 aaKnown RBP10.33□□□□□ -0.76
GABRE-210ENST00000489333 PHAXQ9H814 394 aaKnown RBP10.33□□□□□ -0.76
GABRE-210ENST00000489333 ATG3Q9NT62 314 aa10.33□□□□□ -0.76
GABRE-210ENST00000489333 ADCY9O60503 1353 aa10.33□□□□□ -0.76
GABRE-210ENST00000489333 MRC1P22897 1456 aa10.32□□□□□ -0.76
GABRE-210ENST00000489333 TPM2P07951 284 aa10.32□□□□□ -0.76
GABRE-210ENST00000489333 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.32□□□□□ -0.76
GABRE-210ENST00000489333 ZNF526Q8TF50 670 aaPredicted RBP10.32□□□□□ -0.76
GABRE-210ENST00000489333 PDLIM2Q96JY6 352 aa10.32□□□□□ -0.76
GABRE-210ENST00000489333 PANK2Q9BZ23 570 aa10.32□□□□□ -0.76
GABRE-210ENST00000489333 CCDC39Q9UFE4 941 aa10.32□□□□□ -0.76
GABRE-210ENST00000489333 CYP46A1Q9Y6A2 500 aa10.32□□□□□ -0.76
GABRE-210ENST00000489333 KIF13BQ9NQT8 1826 aa10.31□□□□□ -0.76
GABRE-210ENST00000489333 C4AP0C0L4 1744 aa10.31□□□□□ -0.76
GABRE-210ENST00000489333 GABBR2O75899 941 aa10.31□□□□□ -0.76
GABRE-210ENST00000489333 NBPF7P0C2Y1 421 aaPredicted RBP10.31□□□□□ -0.76
GABRE-210ENST00000489333 GAS2L3Q86XJ1 694 aa10.31□□□□□ -0.76
GABRE-210ENST00000489333 ZGPATQ8N5A5 531 aaKnown RBP10.31□□□□□ -0.76
GABRE-210ENST00000489333 TTC14Q96N46 770 aa10.31□□□□□ -0.76
GABRE-210ENST00000489333 LSG1Q9H089 658 aaKnown RBP10.31□□□□□ -0.76
GABRE-210ENST00000489333 SMC3Q9UQE7 1217 aa10.31□□□□□ -0.76
GABRE-210ENST00000489333 MAP3K2Q9Y2U5 619 aa10.31□□□□□ -0.76
GABRE-210ENST00000489333 ZDHHC9Q9Y397 364 aa10.31□□□□□ -0.76
GABRE-210ENST00000489333 CICQ96RK0 1608 aaPredicted RBP10.31□□□□□ -0.76
GABRE-210ENST00000489333 MYH14Q7Z406 1995 aaKnown RBP10.31□□□□□ -0.76
GABRE-210ENST00000489333 CCDC171Q6TFL3 1326 aa10.31□□□□□ -0.76
GABRE-210ENST00000489333 KIAA1551Q9HCM1 1747 aa10.3□□□□□ -0.76
GABRE-210ENST00000489333 TPM3P06753 285 aa10.3□□□□□ -0.76
GABRE-210ENST00000489333 MMP10P09238 476 aa10.3□□□□□ -0.76
GABRE-210ENST00000489333 ZSCAN22P10073 491 aaPredicted RBP10.3□□□□□ -0.76
GABRE-210ENST00000489333 UBE2HP62256 183 aa10.3□□□□□ -0.76
GABRE-210ENST00000489333 TSGA10IPQ3SY00 556 aa10.3□□□□□ -0.76
GABRE-210ENST00000489333 NUTM1Q86Y26 1132 aa10.3□□□□□ -0.76
GABRE-210ENST00000489333 NECTIN2Q92692 538 aa10.3□□□□□ -0.76
GABRE-210ENST00000489333 DCAF5Q96JK2 942 aa10.3□□□□□ -0.76
GABRE-210ENST00000489333 TSPYL2Q9H2G4 693 aaPredicted RBP10.3□□□□□ -0.76
GABRE-210ENST00000489333 TSPY26PQ9H489 355 aa10.3□□□□□ -0.76
GABRE-210ENST00000489333 LGR6Q9HBX8 967 aa10.3□□□□□ -0.76
GABRE-210ENST00000489333 GPBP1L1Q9HC44 474 aaPredicted RBP10.3□□□□□ -0.76
GABRE-210ENST00000489333 ZSWIM6Q9HCJ5 1215 aa10.3□□□□□ -0.76
GABRE-210ENST00000489333 IL1RAPL2Q9NP60 686 aa10.3□□□□□ -0.76
GABRE-210ENST00000489333 RRAGDQ9NQL2 400 aaPredicted RBP10.3□□□□□ -0.76
GABRE-210ENST00000489333 SNX14Q9Y5W7 946 aa10.3□□□□□ -0.76
GABRE-210ENST00000489333 ZNF831Q5JPB2 1677 aa10.3□□□□□ -0.76
GABRE-210ENST00000489333 KDM6AO15550 1401 aaPredicted RBP10.3□□□□□ -0.76
GABRE-210ENST00000489333 ERVV-2B6SEH9 535 aa10.29□□□□□ -0.76
GABRE-210ENST00000489333 HMGB1P09429 215 aaKnown RBP10.29□□□□□ -0.76
GABRE-210ENST00000489333 SNRPA1P09661 255 aaKnown RBP10.29□□□□□ -0.76
GABRE-210ENST00000489333 CABP4P57796 275 aa10.29□□□□□ -0.76
GABRE-210ENST00000489333 LRRFIP1Q32MZ4 808 aaKnown RBP10.29□□□□□ -0.76
GABRE-210ENST00000489333 TRAPPC3LQ5T215 181 aa10.29□□□□□ -0.76
GABRE-210ENST00000489333 CCDC183Q5T5S1 534 aa10.29□□□□□ -0.76
GABRE-210ENST00000489333 SLC52A2Q9HAB3 445 aa10.29□□□□□ -0.76
GABRE-210ENST00000489333 NOL7Q9UMY1 257 aaKnown RBP10.29□□□□□ -0.76
GABRE-210ENST00000489333 RTCBQ9Y3I0 505 aaKnown RBP10.29□□□□□ -0.76
GABRE-210ENST00000489333 STX6O43752 255 aa10.28□□□□□ -0.76
GABRE-210ENST00000489333 ZNF500O60304 480 aaPredicted RBP10.28□□□□□ -0.76
GABRE-210ENST00000489333 ZNF790Q6PG37 636 aa10.28□□□□□ -0.76
GABRE-210ENST00000489333 RUFY3Q7L099 469 aa10.28□□□□□ -0.76
GABRE-210ENST00000489333 RIC3Q7Z5B4 369 aa10.28□□□□□ -0.76
GABRE-210ENST00000489333 TTC5Q8N0Z6 440 aa10.28□□□□□ -0.76
GABRE-210ENST00000489333 GPT2Q8TD30 523 aa10.28□□□□□ -0.76
GABRE-210ENST00000489333 MAP4K1Q92918 833 aa10.28□□□□□ -0.76
GABRE-210ENST00000489333 SLC4A9Q96Q91 983 aa10.28□□□□□ -0.76
GABRE-210ENST00000489333 PHF12Q96QT6 1004 aa10.28□□□□□ -0.76
GABRE-210ENST00000489333 METTL22Q9BUU2 404 aaPredicted RBP10.28□□□□□ -0.76
GABRE-210ENST00000489333 COPRSQ9NQ92 184 aa10.28□□□□□ -0.76
GABRE-210ENST00000489333 PDRG1Q9NUG6 133 aa10.28□□□□□ -0.76
GABRE-210ENST00000489333 PALD1Q9ULE6 856 aa10.28□□□□□ -0.76
GABRE-210ENST00000489333 KIF3AQ9Y496 699 aa10.28□□□□□ -0.76
GABRE-210ENST00000489333 LAMB4A4D0S4 1761 aa10.28□□□□□ -0.76
GABRE-210ENST00000489333 BRCA1P38398 1863 aaKnown RBP10.27□□□□□ -0.76
GABRE-210ENST00000489333 TJP1Q07157 1748 aa10.27□□□□□ -0.76
GABRE-210ENST00000489333 PTCD1O75127 700 aaKnown RBP10.27□□□□□ -0.77
GABRE-210ENST00000489333 CAVIN2O95810 425 aa10.27□□□□□ -0.77
GABRE-210ENST00000489333 RFC4P35249 363 aa10.27□□□□□ -0.77
GABRE-210ENST00000489333 NECTIN1Q15223 517 aa10.27□□□□□ -0.77
GABRE-210ENST00000489333 CWC27Q6UX04 472 aaKnown RBP10.27□□□□□ -0.77
GABRE-210ENST00000489333 AACSQ86V21 672 aa10.27□□□□□ -0.77
GABRE-210ENST00000489333 ARHGEF1Q92888 912 aaKnown RBP10.27□□□□□ -0.77
GABRE-210ENST00000489333 FMNL2Q96PY5 1086 aa10.27□□□□□ -0.77
GABRE-210ENST00000489333 GPR108Q9NPR9 543 aa10.27□□□□□ -0.77
GABRE-210ENST00000489333 SPEF2Q9C093 1822 aa10.27□□□□□ -0.77
GABRE-210ENST00000489333 ELP1O95163 1332 aa10.27□□□□□ -0.77
GABRE-210ENST00000489333 F13A1P00488 732 aa10.26□□□□□ -0.77
GABRE-210ENST00000489333 ATP5JP18859 108 aa10.26□□□□□ -0.77
GABRE-210ENST00000489333 CASTP20810 708 aaKnown RBP10.26□□□□□ -0.77
GABRE-210ENST00000489333 KCNJ4P48050 445 aa10.26□□□□□ -0.77
GABRE-210ENST00000489333 AK2P54819 239 aa10.26□□□□□ -0.77
GABRE-210ENST00000489333 RGS22Q8NE09 1264 aa10.26□□□□□ -0.77
GABRE-210ENST00000489333 CNTNAP4Q9C0A0 1308 aa10.26□□□□□ -0.77
GABRE-210ENST00000489333 RPAP1Q9BWH6 1393 aaPredicted RBP10.26□□□□□ -0.77
GABRE-210ENST00000489333 C10orf71Q711Q0 1435 aa10.25□□□□□ -0.77
GABRE-210ENST00000489333 A0A0G2JLW4 131 aa10.25□□□□□ -0.77
GABRE-210ENST00000489333 NEURL1BA8MQ27 555 aa10.25□□□□□ -0.77
GABRE-210ENST00000489333 OFD1O75665 1012 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms