RNA–Protein interactions for RNA: ENST00000489272.5

CBWD1-216, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-216ENST00000489272 CHMP3Q9Y3E7 222 aa7.63□□□□□ -1.19
CBWD1-216ENST00000489272 ZBTB7BO15156 539 aaPredicted RBP7.62□□□□□ -1.19
CBWD1-216ENST00000489272 CILP2Q8IUL8 1156 aa7.62□□□□□ -1.19
CBWD1-216ENST00000489272 SIX5Q8N196 739 aa7.62□□□□□ -1.19
CBWD1-216ENST00000489272 ZNF594Q96JF6 807 aaPredicted RBP7.62□□□□□ -1.19
CBWD1-216ENST00000489272 M0R2N6 131 aa7.61□□□□□ -1.19
CBWD1-216ENST00000489272 GRNP28799 593 aaKnown RBP7.61□□□□□ -1.19
CBWD1-216ENST00000489272 HIRAP54198 1017 aaPredicted RBP7.61□□□□□ -1.19
CBWD1-216ENST00000489272 PSMA6P60900 246 aaKnown RBP7.61□□□□□ -1.19
CBWD1-216ENST00000489272 GPLD1P80108 840 aa7.61□□□□□ -1.19
CBWD1-216ENST00000489272 BEND4Q6ZU67 534 aa7.61□□□□□ -1.19
CBWD1-216ENST00000489272 DHX32Q7L7V1 743 aaKnown RBP7.61□□□□□ -1.19
CBWD1-216ENST00000489272 SLC38A3Q99624 504 aa7.61□□□□□ -1.19
CBWD1-216ENST00000489272 PHACTR1Q9C0D0 580 aa7.61□□□□□ -1.19
CBWD1-216ENST00000489272 TSPAN10Q9H1Z9 355 aaPredicted RBP7.61□□□□□ -1.19
CBWD1-216ENST00000489272 WISP1O95388 367 aa7.6□□□□□ -1.19
CBWD1-216ENST00000489272 MLLT1Q03111 559 aaPredicted RBP7.6□□□□□ -1.19
CBWD1-216ENST00000489272 IL22RA1Q8N6P7 574 aa7.6□□□□□ -1.19
CBWD1-216ENST00000489272 RAPGEFL1Q9UHV5 662 aa7.6□□□□□ -1.19
CBWD1-216ENST00000489272 MAFBQ9Y5Q3 323 aaPredicted RBP7.6□□□□□ -1.19
CBWD1-216ENST00000489272 BIN1O00499 593 aa7.59□□□□□ -1.19
CBWD1-216ENST00000489272 RASA1P20936 1047 aa7.59□□□□□ -1.19
CBWD1-216ENST00000489272 TSEN2Q8NCE0 465 aaKnown RBP7.59□□□□□ -1.19
CBWD1-216ENST00000489272 GIMAP7Q8NHV1 300 aa7.59□□□□□ -1.19
CBWD1-216ENST00000489272 CALR3Q96L12 384 aaKnown RBP7.59□□□□□ -1.19
CBWD1-216ENST00000489272 ATG3Q9NT62 314 aa7.59□□□□□ -1.19
CBWD1-216ENST00000489272 TFIP11Q9UBB9 837 aaKnown RBP7.59□□□□□ -1.19
CBWD1-216ENST00000489272 HCN4Q9Y3Q4 1203 aa7.59□□□□□ -1.19
CBWD1-216ENST00000489272 A6NJR5 290 aa7.58□□□□□ -1.2
CBWD1-216ENST00000489272 CPSF6Q16630 551 aaKnown RBP eCLIP7.58□□□□□ -1.2
CBWD1-216ENST00000489272 POTEAQ6S8J7 498 aa7.58□□□□□ -1.2
CBWD1-216ENST00000489272 ACAD11Q709F0 780 aa7.58□□□□□ -1.2
CBWD1-216ENST00000489272 MFSD14AQ96MC6 490 aa7.58□□□□□ -1.2
CBWD1-216ENST00000489272 KCNF1Q9H3M0 494 aa7.58□□□□□ -1.2
CBWD1-216ENST00000489272 TTLL10Q6ZVT0 673 aa7.57□□□□□ -1.2
CBWD1-216ENST00000489272 BHLHE22Q8NFJ8 381 aaPredicted RBP7.57□□□□□ -1.2
CBWD1-216ENST00000489272 PAK6Q9NQU5 681 aaPredicted RBP7.57□□□□□ -1.2
CBWD1-216ENST00000489272 BSDC1Q9NW68 430 aaPredicted RBP7.57□□□□□ -1.2
CBWD1-216ENST00000489272 ZFATQ9P243 1243 aa7.57□□□□□ -1.2
CBWD1-216ENST00000489272 PPP1R12BO60237 982 aaPredicted RBP7.56□□□□□ -1.2
CBWD1-216ENST00000489272 BMP3P12645 472 aa7.56□□□□□ -1.2
CBWD1-216ENST00000489272 SEC13P55735 322 aa7.56□□□□□ -1.2
CBWD1-216ENST00000489272 GDF6Q6KF10 455 aaPredicted RBP7.56□□□□□ -1.2
CBWD1-216ENST00000489272 LARP1Q6PKG0 1096 aaKnown RBP7.56□□□□□ -1.2
CBWD1-216ENST00000489272 LCNL1Q6ZST4 164 aa7.56□□□□□ -1.2
CBWD1-216ENST00000489272 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.56□□□□□ -1.2
CBWD1-216ENST00000489272 FLCNQ8NFG4 579 aa7.56□□□□□ -1.2
CBWD1-216ENST00000489272 TOX2Q96NM4 488 aa7.56□□□□□ -1.2
CBWD1-216ENST00000489272 PPP1R12CQ9BZL4 782 aa7.56□□□□□ -1.2
CBWD1-216ENST00000489272 DKK1O94907 266 aa7.55□□□□□ -1.2
CBWD1-216ENST00000489272 EIF2AK2P19525 551 aaKnown RBP7.55□□□□□ -1.2
CBWD1-216ENST00000489272 CFPP27918 469 aa7.55□□□□□ -1.2
CBWD1-216ENST00000489272 SIAH1Q8IUQ4 282 aa7.55□□□□□ -1.2
CBWD1-216ENST00000489272 GALNT11Q8NCW6 608 aa7.55□□□□□ -1.2
CBWD1-216ENST00000489272 COL26A1Q96A83 441 aa7.55□□□□□ -1.2
CBWD1-216ENST00000489272 CSRNP1Q96S65 589 aa7.55□□□□□ -1.2
CBWD1-216ENST00000489272 C21orf2O43822 256 aa7.54□□□□□ -1.2
CBWD1-216ENST00000489272 HIF1AQ16665 826 aa7.54□□□□□ -1.2
CBWD1-216ENST00000489272 HFE2Q6ZVN8 426 aa7.54□□□□□ -1.2
CBWD1-216ENST00000489272 C1QL4Q86Z23 238 aa7.54□□□□□ -1.2
CBWD1-216ENST00000489272 PLD4Q96BZ4 506 aa7.54□□□□□ -1.2
CBWD1-216ENST00000489272 F13BP05160 661 aa7.53□□□□□ -1.2
CBWD1-216ENST00000489272 KIAA1211Q6ZU35 1233 aa7.53□□□□□ -1.2
CBWD1-216ENST00000489272 STAG2Q8N3U4 1231 aa7.53□□□□□ -1.2
CBWD1-216ENST00000489272 GAS2L2Q8NHY3 880 aa7.53□□□□□ -1.2
CBWD1-216ENST00000489272 SCG3Q8WXD2 468 aaKnown RBP7.53□□□□□ -1.2
CBWD1-216ENST00000489272 OSBPL1AQ9BXW6 950 aa7.53□□□□□ -1.2
CBWD1-216ENST00000489272 MUC3BQ9H195 1237 aa7.53□□□□□ -1.2
CBWD1-216ENST00000489272 ATAD2Q6PL18 1390 aa7.53□□□□□ -1.2
CBWD1-216ENST00000489272 LMOD1P29536 600 aaPredicted RBP7.52□□□□□ -1.21
CBWD1-216ENST00000489272 CD68P34810 354 aaPredicted RBP7.52□□□□□ -1.21
CBWD1-216ENST00000489272 NRLP54845 237 aa7.52□□□□□ -1.21
CBWD1-216ENST00000489272 KRTAP1-1Q07627 177 aa7.52□□□□□ -1.21
CBWD1-216ENST00000489272 MESP2Q0VG99 397 aa7.52□□□□□ -1.21
CBWD1-216ENST00000489272 CRTC2Q53ET0 693 aaPredicted RBP7.52□□□□□ -1.21
CBWD1-216ENST00000489272 ZSCAN18Q8TBC5 510 aaPredicted RBP7.52□□□□□ -1.21
CBWD1-216ENST00000489272 FAM84AQ96KN4 292 aa7.52□□□□□ -1.21
CBWD1-216ENST00000489272 HIF3AQ9Y2N7 669 aa7.52□□□□□ -1.21
CBWD1-216ENST00000489272 FAM196BA6NMK8 535 aa7.51□□□□□ -1.21
CBWD1-216ENST00000489272 USP17L15C9J2P7 530 aa7.51□□□□□ -1.21
CBWD1-216ENST00000489272 USP17L10C9JJH3 530 aa7.51□□□□□ -1.21
CBWD1-216ENST00000489272 USP17L13C9JLJ4 530 aa7.51□□□□□ -1.21
CBWD1-216ENST00000489272 USP17L12C9JPN9 530 aa7.51□□□□□ -1.21
CBWD1-216ENST00000489272 USP17L11C9JVI0 530 aa7.51□□□□□ -1.21
CBWD1-216ENST00000489272 USP17L21D6R901 530 aa7.51□□□□□ -1.21
CBWD1-216ENST00000489272 USP17L18D6R9N7 530 aa7.51□□□□□ -1.21
CBWD1-216ENST00000489272 USP17L22D6RA61 530 aa7.51□□□□□ -1.21
CBWD1-216ENST00000489272 USP17L17D6RBQ6 530 aa7.51□□□□□ -1.21
CBWD1-216ENST00000489272 USP17L19D6RCP7 530 aa7.51□□□□□ -1.21
CBWD1-216ENST00000489272 USP17L20D6RJB6 530 aa7.51□□□□□ -1.21
CBWD1-216ENST00000489272 ARID4AP29374 1257 aaPredicted RBP7.51□□□□□ -1.21
CBWD1-216ENST00000489272 USP17L24Q0WX57 530 aa7.51□□□□□ -1.21
CBWD1-216ENST00000489272 PTK7Q13308 1070 aa7.51□□□□□ -1.21
CBWD1-216ENST00000489272 IER5Q5VY09 327 aa7.51□□□□□ -1.21
CBWD1-216ENST00000489272 ALDH16A1Q8IZ83 802 aa7.51□□□□□ -1.21
CBWD1-216ENST00000489272 CHMP7Q8WUX9 453 aaPredicted RBP7.51□□□□□ -1.21
CBWD1-216ENST00000489272 TMEM40Q8WWA1 233 aa7.51□□□□□ -1.21
CBWD1-216ENST00000489272 HINFPQ9BQA5 517 aa7.51□□□□□ -1.21
CBWD1-216ENST00000489272 C2orf49Q9BVC5 232 aaPredicted RBP7.51□□□□□ -1.21
CBWD1-216ENST00000489272 VRTNQ9H8Y1 702 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms