RNA–Protein interactions for RNA: ENST00000489206.1

SYNGR1-207, Transcript of synaptogyrin 1, humanhuman

TSL 2

Gene SYNGR1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-207ENST00000489206 NHSL1Q5SYE7 1610 aa23.25■■□□□ 1.31
SYNGR1-207ENST00000489206 GTF3C6Q969F1 213 aa23.25■■□□□ 1.31
SYNGR1-207ENST00000489206 DSCC1Q9BVC3 393 aa23.25■■□□□ 1.31
SYNGR1-207ENST00000489206 COL9A3Q14050 684 aaPredicted RBP23.24■■□□□ 1.31
SYNGR1-207ENST00000489206 TCEANC2Q96MN5 208 aa23.24■■□□□ 1.31
SYNGR1-207ENST00000489206 ISCA1Q9BUE6 129 aa23.24■■□□□ 1.31
SYNGR1-207ENST00000489206 CYP21A2P08686 494 aa23.23■■□□□ 1.31
SYNGR1-207ENST00000489206 CDC37L1Q7L3B6 337 aa23.23■■□□□ 1.31
SYNGR1-207ENST00000489206 NEUROD6Q96NK8 337 aa23.23■■□□□ 1.31
SYNGR1-207ENST00000489206 ZBTB3Q9H5J0 574 aa23.23■■□□□ 1.31
SYNGR1-207ENST00000489206 MYH15Q9Y2K3 1946 aa23.23■■□□□ 1.31
SYNGR1-207ENST00000489206 NDUFB9Q9Y6M9 179 aa23.23■■□□□ 1.31
SYNGR1-207ENST00000489206 OFD1O75665 1012 aa23.22■■□□□ 1.31
SYNGR1-207ENST00000489206 TRIM28Q13263 835 aaKnown RBP23.22■■□□□ 1.31
SYNGR1-207ENST00000489206 ZMYM1Q5SVZ6 1142 aa23.22■■□□□ 1.31
SYNGR1-207ENST00000489206 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.22■■□□□ 1.31
SYNGR1-207ENST00000489206 CCDC129Q6ZRS4 1044 aa23.22■■□□□ 1.31
SYNGR1-207ENST00000489206 TEX13AQ9BXU3 409 aaPredicted RBP23.22■■□□□ 1.31
SYNGR1-207ENST00000489206 SCAND2PQ9GZW5 306 aaPredicted RBP23.22■■□□□ 1.31
SYNGR1-207ENST00000489206 HSPA1LP34931 641 aa23.21■■□□□ 1.31
SYNGR1-207ENST00000489206 SEC62Q99442 399 aaKnown RBP23.21■■□□□ 1.31
SYNGR1-207ENST00000489206 FUCA2Q9BTY2 467 aa23.21■■□□□ 1.31
SYNGR1-207ENST00000489206 GOLIM4O00461 696 aa23.21■■□□□ 1.31
SYNGR1-207ENST00000489206 Q6ZUG5 572 aa23.21■■□□□ 1.31
SYNGR1-207ENST00000489206 VSIG10Q8N0Z9 540 aa23.21■■□□□ 1.31
SYNGR1-207ENST00000489206 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.21■■□□□ 1.31
SYNGR1-207ENST00000489206 ITGB4P16144 1822 aa23.2■■□□□ 1.31
SYNGR1-207ENST00000489206 TCIRG1Q13488 830 aa23.2■■□□□ 1.3
SYNGR1-207ENST00000489206 LRRFIP1Q32MZ4 808 aaKnown RBP23.2■■□□□ 1.3
SYNGR1-207ENST00000489206 LLPHQ9BRT6 129 aaKnown RBP23.2■■□□□ 1.3
SYNGR1-207ENST00000489206 MYH7P12883 1935 aa23.2■■□□□ 1.3
SYNGR1-207ENST00000489206 IFIT1P09914 478 aaKnown RBP23.2■■□□□ 1.3
SYNGR1-207ENST00000489206 TTC6Q86TZ1 520 aa23.2■■□□□ 1.3
SYNGR1-207ENST00000489206 TMOD3Q9NYL9 352 aa23.2■■□□□ 1.3
SYNGR1-207ENST00000489206 ANKRD36CQ5JPF3 1778 aa23.19■■□□□ 1.3
SYNGR1-207ENST00000489206 A0A1B0GUL7 405 aa23.19■■□□□ 1.3
SYNGR1-207ENST00000489206 PLA2G12BQ9BX93 195 aa23.19■■□□□ 1.3
SYNGR1-207ENST00000489206 ABCC12Q96J65 1359 aa23.18■■□□□ 1.3
SYNGR1-207ENST00000489206 TIMM10P62072 90 aa23.18■■□□□ 1.3
SYNGR1-207ENST00000489206 STK3Q13188 491 aa23.18■■□□□ 1.3
SYNGR1-207ENST00000489206 LRRC24Q50LG9 513 aa23.18■■□□□ 1.3
SYNGR1-207ENST00000489206 DHX32Q7L7V1 743 aaKnown RBP23.18■■□□□ 1.3
SYNGR1-207ENST00000489206 CEP126Q9P2H0 1117 aa23.18■■□□□ 1.3
SYNGR1-207ENST00000489206 AKAP2Q9Y2D5 859 aa23.18■■□□□ 1.3
SYNGR1-207ENST00000489206 RNF113AO15541 343 aaKnown RBP23.18■■□□□ 1.3
SYNGR1-207ENST00000489206 HSP90B1P14625 803 aaKnown RBP23.18■■□□□ 1.3
SYNGR1-207ENST00000489206 PFKFB2O60825 505 aa23.17■■□□□ 1.3
SYNGR1-207ENST00000489206 PCCAP05165 728 aaPredicted RBP23.17■■□□□ 1.3
SYNGR1-207ENST00000489206 TPM2P07951 284 aa23.17■■□□□ 1.3
SYNGR1-207ENST00000489206 EVA1CP58658 441 aa23.17■■□□□ 1.3
SYNGR1-207ENST00000489206 CCDC57Q2TAC2 916 aa23.17■■□□□ 1.3
SYNGR1-207ENST00000489206 CHMP4CQ96CF2 233 aa23.17■■□□□ 1.3
SYNGR1-207ENST00000489206 MYH3P11055 1940 aa23.17■■□□□ 1.3
SYNGR1-207ENST00000489206 CHGBP05060 677 aa23.16■■□□□ 1.3
SYNGR1-207ENST00000489206 HCLS1P14317 486 aaPredicted RBP23.16■■□□□ 1.3
SYNGR1-207ENST00000489206 TERF1P54274 439 aa23.16■■□□□ 1.3
SYNGR1-207ENST00000489206 KIF6Q6ZMV9 814 aa23.16■■□□□ 1.3
SYNGR1-207ENST00000489206 FERMT3Q86UX7 667 aa23.16■■□□□ 1.3
SYNGR1-207ENST00000489206 SMARCC2Q8TAQ2 1214 aa23.16■■□□□ 1.3
SYNGR1-207ENST00000489206 AGXT2Q9BYV1 514 aa23.16■■□□□ 1.3
SYNGR1-207ENST00000489206 PTMAP06454 111 aaKnown RBP23.16■■□□□ 1.3
SYNGR1-207ENST00000489206 STOX1Q6ZVD7 989 aa23.16■■□□□ 1.3
SYNGR1-207ENST00000489206 ZNF594Q96JF6 807 aaPredicted RBP23.16■■□□□ 1.3
SYNGR1-207ENST00000489206 ZSCAN16Q9H4T2 348 aaPredicted RBP23.16■■□□□ 1.3
SYNGR1-207ENST00000489206 KIF3AQ9Y496 699 aa23.16■■□□□ 1.3
SYNGR1-207ENST00000489206 STRN4Q9NRL3 753 aa23.15■■□□□ 1.3
SYNGR1-207ENST00000489206 LRP6O75581 1613 aa23.15■■□□□ 1.3
SYNGR1-207ENST00000489206 MAST3O60307 1309 aa23.15■■□□□ 1.3
SYNGR1-207ENST00000489206 DTNBO60941 627 aa23.14■■□□□ 1.3
SYNGR1-207ENST00000489206 CCDC192P0DO97 292 aa23.14■■□□□ 1.3
SYNGR1-207ENST00000489206 FGD1P98174 961 aa23.14■■□□□ 1.3
SYNGR1-207ENST00000489206 CCDC158Q5M9N0 1113 aa23.14■■□□□ 1.3
SYNGR1-207ENST00000489206 GIMAP6Q6P9H5 292 aa23.14■■□□□ 1.3
SYNGR1-207ENST00000489206 BRF1Q92994 677 aa23.14■■□□□ 1.3
SYNGR1-207ENST00000489206 SPATA32Q96LK8 384 aa23.14■■□□□ 1.3
SYNGR1-207ENST00000489206 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.14■■□□□ 1.29
SYNGR1-207ENST00000489206 ZFYP08048 801 aaPredicted RBP23.14■■□□□ 1.29
SYNGR1-207ENST00000489206 HSPD1P10809 573 aaKnown RBP23.14■■□□□ 1.29
SYNGR1-207ENST00000489206 HMGN5P82970 282 aaKnown RBP23.14■■□□□ 1.29
SYNGR1-207ENST00000489206 EXOSC10Q01780 885 aaKnown RBP23.14■■□□□ 1.29
SYNGR1-207ENST00000489206 RESTQ13127 1097 aa23.14■■□□□ 1.29
SYNGR1-207ENST00000489206 CCDC9Q9Y3X0 531 aaKnown RBP23.14■■□□□ 1.29
SYNGR1-207ENST00000489206 LEO1Q8WVC0 666 aaPredicted RBP23.13■■□□□ 1.29
SYNGR1-207ENST00000489206 NUP62CLQ9H1M0 184 aa23.13■■□□□ 1.29
SYNGR1-207ENST00000489206 DDX19AQ9NUU7 478 aaKnown RBP23.13■■□□□ 1.29
SYNGR1-207ENST00000489206 CDHR2Q9BYE9 1310 aa23.13■■□□□ 1.29
SYNGR1-207ENST00000489206 PLCH1Q4KWH8 1693 aa23.13■■□□□ 1.29
SYNGR1-207ENST00000489206 JAK2O60674 1132 aa23.12■■□□□ 1.29
SYNGR1-207ENST00000489206 STARD3NLO95772 234 aa23.12■■□□□ 1.29
SYNGR1-207ENST00000489206 CSF1RP07333 972 aa23.12■■□□□ 1.29
SYNGR1-207ENST00000489206 ZBTB38Q8NAP3 1195 aaPredicted RBP23.12■■□□□ 1.29
SYNGR1-207ENST00000489206 PUS3Q9BZE2 481 aaKnown RBP23.12■■□□□ 1.29
SYNGR1-207ENST00000489206 USP25Q9UHP3 1055 aa23.12■■□□□ 1.29
SYNGR1-207ENST00000489206 PHLPP1O60346 1717 aa23.12■■□□□ 1.29
SYNGR1-207ENST00000489206 GOLGA6L4A6NEF3 574 aa23.12■■□□□ 1.29
SYNGR1-207ENST00000489206 KDM4AO75164 1064 aa23.12■■□□□ 1.29
SYNGR1-207ENST00000489206 SCRN1Q12765 414 aa23.12■■□□□ 1.29
SYNGR1-207ENST00000489206 MAP3K11Q16584 847 aa23.12■■□□□ 1.29
SYNGR1-207ENST00000489206 NAA16Q6N069 864 aaPredicted RBP23.12■■□□□ 1.29
SYNGR1-207ENST00000489206 FBXL16Q8N461 479 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms