RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 LMCD1Q9NZU5 365 aa5.36□□□□□ -1.55
PRPF4-203ENST00000488937 PIM2Q9P1W9 311 aa5.36□□□□□ -1.55
PRPF4-203ENST00000488937 PCDHGA11Q9Y5H2 935 aa5.36□□□□□ -1.55
PRPF4-203ENST00000488937 POM121CA8CG34 1229 aa5.35□□□□□ -1.55
PRPF4-203ENST00000488937 BIN1O00499 593 aa5.35□□□□□ -1.55
PRPF4-203ENST00000488937 C1QL4Q86Z23 238 aa5.35□□□□□ -1.55
PRPF4-203ENST00000488937 ADAMTS19Q8TE59 1207 aa5.35□□□□□ -1.55
PRPF4-203ENST00000488937 USTQ9Y2C2 406 aa5.35□□□□□ -1.55
PRPF4-203ENST00000488937 ARID4AP29374 1257 aaPredicted RBP5.34□□□□□ -1.55
PRPF4-203ENST00000488937 GTF2IP78347 998 aa5.34□□□□□ -1.55
PRPF4-203ENST00000488937 FAM35AQ86V20 835 aa5.34□□□□□ -1.55
PRPF4-203ENST00000488937 AGGF1Q8N302 714 aaeCLIP5.34□□□□□ -1.55
PRPF4-203ENST00000488937 SRA1Q9HD15 236 aaKnown RBP5.34□□□□□ -1.55
PRPF4-203ENST00000488937 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.34□□□□□ -1.55
PRPF4-203ENST00000488937 EPHA4P54764 986 aa5.33□□□□□ -1.56
PRPF4-203ENST00000488937 TTC9Q92623 222 aa5.33□□□□□ -1.56
PRPF4-203ENST00000488937 UTP4Q969X6 686 aaKnown RBP5.33□□□□□ -1.56
PRPF4-203ENST00000488937 HSH2DQ96JZ2 352 aa5.33□□□□□ -1.56
PRPF4-203ENST00000488937 SUSD3Q96L08 255 aa5.33□□□□□ -1.56
PRPF4-203ENST00000488937 CEP41Q9BYV8 373 aa5.33□□□□□ -1.56
PRPF4-203ENST00000488937 ACIN1Q9UKV3 1341 aaKnown RBP5.32□□□□□ -1.56
PRPF4-203ENST00000488937 EPB42P16452 691 aa5.32□□□□□ -1.56
PRPF4-203ENST00000488937 CCINQ13939 588 aa5.32□□□□□ -1.56
PRPF4-203ENST00000488937 CLEC10AQ8IUN9 316 aa5.32□□□□□ -1.56
PRPF4-203ENST00000488937 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.32□□□□□ -1.56
PRPF4-203ENST00000488937 FAM84AQ96KN4 292 aa5.32□□□□□ -1.56
PRPF4-203ENST00000488937 LPIN3Q9BQK8 851 aa5.32□□□□□ -1.56
PRPF4-203ENST00000488937 FAM83CQ9BQN1 747 aa5.32□□□□□ -1.56
PRPF4-203ENST00000488937 PHACTR1Q9C0D0 580 aa5.32□□□□□ -1.56
PRPF4-203ENST00000488937 WDR64B1ANS9 1081 aa5.31□□□□□ -1.56
PRPF4-203ENST00000488937 EIF5BO60841 1220 aaKnown RBP5.31□□□□□ -1.56
PRPF4-203ENST00000488937 FOSL1P15407 271 aa5.31□□□□□ -1.56
PRPF4-203ENST00000488937 CCDC27Q2M243 656 aa5.31□□□□□ -1.56
PRPF4-203ENST00000488937 ELMSAN1Q6PJG2 1045 aa5.31□□□□□ -1.56
PRPF4-203ENST00000488937 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.31□□□□□ -1.56
PRPF4-203ENST00000488937 BTLAQ7Z6A9 289 aa5.31□□□□□ -1.56
PRPF4-203ENST00000488937 TRIM50Q86XT4 487 aa5.31□□□□□ -1.56
PRPF4-203ENST00000488937 MAP4K3Q8IVH8 894 aa5.31□□□□□ -1.56
PRPF4-203ENST00000488937 NFATC2IPQ8NCF5 419 aa5.31□□□□□ -1.56
PRPF4-203ENST00000488937 MYRFLQ96LU7 910 aa5.31□□□□□ -1.56
PRPF4-203ENST00000488937 MAP3K6O95382 1288 aa5.3□□□□□ -1.56
PRPF4-203ENST00000488937 ZSCAN22P10073 491 aaPredicted RBP5.3□□□□□ -1.56
PRPF4-203ENST00000488937 NFKB1P19838 968 aa5.3□□□□□ -1.56
PRPF4-203ENST00000488937 CTSWP56202 376 aa5.3□□□□□ -1.56
PRPF4-203ENST00000488937 SRPK2P78362 688 aaKnown RBP5.3□□□□□ -1.56
PRPF4-203ENST00000488937 MESP2Q0VG99 397 aa5.3□□□□□ -1.56
PRPF4-203ENST00000488937 HDGFL1Q5TGJ6 251 aa5.3□□□□□ -1.56
PRPF4-203ENST00000488937 IER5Q5VY09 327 aa5.3□□□□□ -1.56
PRPF4-203ENST00000488937 POTEAQ6S8J7 498 aa5.3□□□□□ -1.56
PRPF4-203ENST00000488937 SND1Q7KZF4 910 aaKnown RBP eCLIP5.3□□□□□ -1.56
PRPF4-203ENST00000488937 LRRC56Q8IYG6 542 aaPredicted RBP5.3□□□□□ -1.56
PRPF4-203ENST00000488937 TNS4Q8IZW8 715 aa5.3□□□□□ -1.56
PRPF4-203ENST00000488937 TMEM40Q8WWA1 233 aa5.3□□□□□ -1.56
PRPF4-203ENST00000488937 PBXIP1Q96AQ6 731 aa5.3□□□□□ -1.56
PRPF4-203ENST00000488937 FAM46AQ96IP4 442 aaKnown RBP5.3□□□□□ -1.56
PRPF4-203ENST00000488937 UCN2Q96RP3 112 aa5.3□□□□□ -1.56
PRPF4-203ENST00000488937 GSX2Q9BZM3 304 aa5.3□□□□□ -1.56
PRPF4-203ENST00000488937 UNCXA6NJT0 531 aa5.29□□□□□ -1.56
PRPF4-203ENST00000488937 PIK3CDO00329 1044 aa5.29□□□□□ -1.56
PRPF4-203ENST00000488937 CPB1P15086 417 aa5.29□□□□□ -1.56
PRPF4-203ENST00000488937 ATP1A2P50993 1020 aa5.29□□□□□ -1.56
PRPF4-203ENST00000488937 TBCELQ5QJ74 424 aa5.29□□□□□ -1.56
PRPF4-203ENST00000488937 GLMNQ92990 594 aa5.29□□□□□ -1.56
PRPF4-203ENST00000488937 C11orf16Q9NQ32 467 aa5.29□□□□□ -1.56
PRPF4-203ENST00000488937 LEMD3Q9Y2U8 911 aa5.29□□□□□ -1.56
PRPF4-203ENST00000488937 HCN4Q9Y3Q4 1203 aa5.29□□□□□ -1.56
PRPF4-203ENST00000488937 SKIP12755 728 aa5.28□□□□□ -1.56
PRPF4-203ENST00000488937 RAP1GAPP47736 663 aa5.28□□□□□ -1.56
PRPF4-203ENST00000488937 ECM1Q16610 540 aa5.28□□□□□ -1.56
PRPF4-203ENST00000488937 SH3PXD2AQ5TCZ1 1133 aa5.28□□□□□ -1.56
PRPF4-203ENST00000488937 ZNF280CQ8ND82 737 aa5.28□□□□□ -1.56
PRPF4-203ENST00000488937 USP35Q9P2H5 1018 aa5.28□□□□□ -1.56
PRPF4-203ENST00000488937 RBM47A0AV96 593 aaKnown RBP5.27□□□□□ -1.57
PRPF4-203ENST00000488937 M0R2N6 131 aa5.27□□□□□ -1.57
PRPF4-203ENST00000488937 GPLD1P80108 840 aa5.27□□□□□ -1.57
PRPF4-203ENST00000488937 CPSF6Q16630 551 aaKnown RBP eCLIP5.27□□□□□ -1.57
PRPF4-203ENST00000488937 PERM1Q5SV97 790 aa5.27□□□□□ -1.57
PRPF4-203ENST00000488937 PLEKHM2Q8IWE5 1019 aa5.27□□□□□ -1.57
PRPF4-203ENST00000488937 CACTIN-AS1Q8N1I8 211 aa5.27□□□□□ -1.57
PRPF4-203ENST00000488937 GIMAP7Q8NHV1 300 aa5.27□□□□□ -1.57
PRPF4-203ENST00000488937 TRPM4Q8TD43 1214 aa5.27□□□□□ -1.57
PRPF4-203ENST00000488937 CALR3Q96L12 384 aaKnown RBP5.27□□□□□ -1.57
PRPF4-203ENST00000488937 PAK6Q9NQU5 681 aaPredicted RBP5.27□□□□□ -1.57
PRPF4-203ENST00000488937 BSDC1Q9NW68 430 aaPredicted RBP5.27□□□□□ -1.57
PRPF4-203ENST00000488937 ATP9BO43861 1147 aa5.26□□□□□ -1.57
PRPF4-203ENST00000488937 PLAURQ03405 335 aa5.26□□□□□ -1.57
PRPF4-203ENST00000488937 NCOA4Q13772 614 aa5.26□□□□□ -1.57
PRPF4-203ENST00000488937 DHX32Q7L7V1 743 aaKnown RBP5.26□□□□□ -1.57
PRPF4-203ENST00000488937 FAM20CQ8IXL6 584 aa5.26□□□□□ -1.57
PRPF4-203ENST00000488937 ALDH16A1Q8IZ83 802 aa5.26□□□□□ -1.57
PRPF4-203ENST00000488937 FAM177A1Q8N128 213 aaPredicted RBP5.26□□□□□ -1.57
PRPF4-203ENST00000488937 STAG2Q8N3U4 1231 aa5.26□□□□□ -1.57
PRPF4-203ENST00000488937 GAS2L2Q8NHY3 880 aa5.26□□□□□ -1.57
PRPF4-203ENST00000488937 FAM168AQ92567 244 aa5.26□□□□□ -1.57
PRPF4-203ENST00000488937 TSPAN10Q9H1Z9 355 aaPredicted RBP5.26□□□□□ -1.57
PRPF4-203ENST00000488937 RBM19Q9Y4C8 960 aaKnown RBP5.26□□□□□ -1.57
PRPF4-203ENST00000488937 IVNS1ABPQ9Y6Y0 642 aa5.26□□□□□ -1.57
PRPF4-203ENST00000488937 USP17L5A8MUK1 530 aa5.25□□□□□ -1.57
PRPF4-203ENST00000488937 TGFBR3LH3BV60 316 aa5.25□□□□□ -1.57
PRPF4-203ENST00000488937 PPP1R12BO60237 982 aaPredicted RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms