RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 GCKRQ14397 625 aa8.05□□□□□ -1.12
HDLBP-243ENST00000488923 PROSER3Q2NL68 480 aa8.05□□□□□ -1.12
HDLBP-243ENST00000488923 IL17RAQ96F46 866 aa8.05□□□□□ -1.12
HDLBP-243ENST00000488923 GBP4Q96PP9 640 aa8.05□□□□□ -1.12
HDLBP-243ENST00000488923 KIF2CQ99661 725 aa8.05□□□□□ -1.12
HDLBP-243ENST00000488923 CWC22Q9HCG8 908 aaKnown RBP8.05□□□□□ -1.12
HDLBP-243ENST00000488923 ECHDC1Q9NTX5 307 aa8.05□□□□□ -1.12
HDLBP-243ENST00000488923 TNS2Q63HR2 1409 aa8.04□□□□□ -1.12
HDLBP-243ENST00000488923 AHDC1Q5TGY3 1603 aaPredicted RBP8.04□□□□□ -1.12
HDLBP-243ENST00000488923 ABCA3Q99758 1704 aa8.04□□□□□ -1.12
HDLBP-243ENST00000488923 MYL6BP14649 208 aa8.04□□□□□ -1.12
HDLBP-243ENST00000488923 PRSS12P56730 875 aa8.04□□□□□ -1.12
HDLBP-243ENST00000488923 CWF19L2Q2TBE0 894 aaKnown RBP8.04□□□□□ -1.12
HDLBP-243ENST00000488923 KIAA1211Q6ZU35 1233 aa8.04□□□□□ -1.12
HDLBP-243ENST00000488923 LRP10Q7Z4F1 713 aa8.04□□□□□ -1.12
HDLBP-243ENST00000488923 CERKQ8TCT0 537 aa8.04□□□□□ -1.12
HDLBP-243ENST00000488923 RILPL2Q969X0 211 aa8.04□□□□□ -1.12
HDLBP-243ENST00000488923 MYD88Q99836 296 aa8.04□□□□□ -1.12
HDLBP-243ENST00000488923 TMOD3Q9NYL9 352 aa8.04□□□□□ -1.12
HDLBP-243ENST00000488923 USP16Q9Y5T5 823 aa8.04□□□□□ -1.12
HDLBP-243ENST00000488923 LAMB4A4D0S4 1761 aa8.04□□□□□ -1.12
HDLBP-243ENST00000488923 COL14A1Q05707 1796 aaKnown RBP8.03□□□□□ -1.12
HDLBP-243ENST00000488923 PRAMEF22A3QJZ6 481 aa8.03□□□□□ -1.12
HDLBP-243ENST00000488923 IGKV5-2P06315 115 aa8.03□□□□□ -1.12
HDLBP-243ENST00000488923 NUCB2P80303 420 aa8.03□□□□□ -1.12
HDLBP-243ENST00000488923 RABL6Q3YEC7 729 aaPredicted RBP8.03□□□□□ -1.12
HDLBP-243ENST00000488923 CCDC191Q8NCU4 936 aa8.03□□□□□ -1.12
HDLBP-243ENST00000488923 PI4K2BQ8TCG2 481 aa8.03□□□□□ -1.12
HDLBP-243ENST00000488923 EVI5LQ96CN4 794 aa8.03□□□□□ -1.12
HDLBP-243ENST00000488923 SUCLG2Q96I99 432 aa8.03□□□□□ -1.12
HDLBP-243ENST00000488923 BICC1Q9H694 974 aaKnown RBP8.03□□□□□ -1.12
HDLBP-243ENST00000488923 IL1RAPL2Q9NP60 686 aa8.03□□□□□ -1.12
HDLBP-243ENST00000488923 COPRSQ9NQ92 184 aa8.03□□□□□ -1.12
HDLBP-243ENST00000488923 STRN4Q9NRL3 753 aa8.03□□□□□ -1.12
HDLBP-243ENST00000488923 THRAP3Q9Y2W1 955 aaKnown RBP8.03□□□□□ -1.12
HDLBP-243ENST00000488923 RAD50Q92878 1312 aa8.03□□□□□ -1.12
HDLBP-243ENST00000488923 NBPF26B4DH59 902 aa8.02□□□□□ -1.13
HDLBP-243ENST00000488923 GOLGA6L22H0YM25 854 aa8.02□□□□□ -1.13
HDLBP-243ENST00000488923 STARD3NLO95772 234 aa8.02□□□□□ -1.13
HDLBP-243ENST00000488923 DDIT3P35638 169 aa8.02□□□□□ -1.13
HDLBP-243ENST00000488923 SKOR2Q2VWA4 1001 aaPredicted RBP8.02□□□□□ -1.13
HDLBP-243ENST00000488923 HSP90AB3PQ58FF7 597 aa8.02□□□□□ -1.13
HDLBP-243ENST00000488923 TREML4Q6UXN2 200 aa8.02□□□□□ -1.13
HDLBP-243ENST00000488923 TRIM67Q6ZTA4 783 aa8.02□□□□□ -1.13
HDLBP-243ENST00000488923 NUTM1Q86Y26 1132 aa8.02□□□□□ -1.13
HDLBP-243ENST00000488923 TATDN2Q93075 761 aa8.02□□□□□ -1.13
HDLBP-243ENST00000488923 BCL11AQ9H165 835 aa8.02□□□□□ -1.13
HDLBP-243ENST00000488923 ANO2Q9NQ90 1003 aa8.02□□□□□ -1.13
HDLBP-243ENST00000488923 DIAPH3Q9NSV4 1193 aa8.02□□□□□ -1.13
HDLBP-243ENST00000488923 ATG3Q9NT62 314 aa8.02□□□□□ -1.13
HDLBP-243ENST00000488923 CWC25Q9NXE8 425 aaPredicted RBP8.02□□□□□ -1.13
HDLBP-243ENST00000488923 PNMA3Q9UL41 463 aa8.02□□□□□ -1.13
HDLBP-243ENST00000488923 COL22A1Q8NFW1 1626 aaPredicted RBP8.02□□□□□ -1.13
HDLBP-243ENST00000488923 RFX7Q2KHR2 1363 aa8.01□□□□□ -1.13
HDLBP-243ENST00000488923 LRP6O75581 1613 aa8.01□□□□□ -1.13
HDLBP-243ENST00000488923 PAPPAQ13219 1627 aa8.01□□□□□ -1.13
HDLBP-243ENST00000488923 A0A087WZG4 1122 aa8.01□□□□□ -1.13
HDLBP-243ENST00000488923 SGSM2O43147 1006 aa8.01□□□□□ -1.13
HDLBP-243ENST00000488923 RNF40O75150 1001 aa8.01□□□□□ -1.13
HDLBP-243ENST00000488923 FRAT2O75474 233 aaPredicted RBP8.01□□□□□ -1.13
HDLBP-243ENST00000488923 MCM4P33991 863 aa8.01□□□□□ -1.13
HDLBP-243ENST00000488923 TRIM28Q13263 835 aaKnown RBP8.01□□□□□ -1.13
HDLBP-243ENST00000488923 TMEM132AQ24JP5 1023 aa8.01□□□□□ -1.13
HDLBP-243ENST00000488923 AACSQ86V21 672 aa8.01□□□□□ -1.13
HDLBP-243ENST00000488923 DDX54Q8TDD1 881 aaKnown RBP8.01□□□□□ -1.13
HDLBP-243ENST00000488923 GPR108Q9NPR9 543 aa8.01□□□□□ -1.13
HDLBP-243ENST00000488923 BTG4Q9NY30 223 aa8.01□□□□□ -1.13
HDLBP-243ENST00000488923 PODXL2Q9NZ53 605 aa8.01□□□□□ -1.13
HDLBP-243ENST00000488923 KCPQ6ZWJ8 1503 aa8.01□□□□□ -1.13
HDLBP-243ENST00000488923 DISP2A7MBM2 1401 aa8.01□□□□□ -1.13
HDLBP-243ENST00000488923 C5P01031 1676 aa8.01□□□□□ -1.13
HDLBP-243ENST00000488923 H7C1W4 665 aa8□□□□□ -1.13
HDLBP-243ENST00000488923 EXOC5O00471 708 aa8□□□□□ -1.13
HDLBP-243ENST00000488923 PDIA4P13667 645 aaKnown RBP8□□□□□ -1.13
HDLBP-243ENST00000488923 HSPA4P34932 840 aa8□□□□□ -1.13
HDLBP-243ENST00000488923 SLC19A1P41440 591 aa8□□□□□ -1.13
HDLBP-243ENST00000488923 RAB3GAP1Q15042 981 aa8□□□□□ -1.13
HDLBP-243ENST00000488923 KIF6Q6ZMV9 814 aa8□□□□□ -1.13
HDLBP-243ENST00000488923 CLEC17AQ6ZS10 378 aa8□□□□□ -1.13
HDLBP-243ENST00000488923 INTS4Q96HW7 963 aaKnown RBP8□□□□□ -1.13
HDLBP-243ENST00000488923 KAZALD1Q96I82 304 aa8□□□□□ -1.13
HDLBP-243ENST00000488923 ISY1Q9ULR0 285 aaKnown RBP8□□□□□ -1.13
HDLBP-243ENST00000488923 UBR2Q8IWV8 1755 aa7.99□□□□□ -1.13
HDLBP-243ENST00000488923 PLCH1Q4KWH8 1693 aa7.99□□□□□ -1.13
HDLBP-243ENST00000488923 CIAO1O76071 339 aa7.99□□□□□ -1.13
HDLBP-243ENST00000488923 GLI3P10071 1580 aa7.99□□□□□ -1.13
HDLBP-243ENST00000488923 PRR20EP86478 221 aa7.99□□□□□ -1.13
HDLBP-243ENST00000488923 PRR20CP86479 221 aa7.99□□□□□ -1.13
HDLBP-243ENST00000488923 PRR20DP86480 221 aa7.99□□□□□ -1.13
HDLBP-243ENST00000488923 PRR20BP86481 221 aa7.99□□□□□ -1.13
HDLBP-243ENST00000488923 PRR20AP86496 221 aa7.99□□□□□ -1.13
HDLBP-243ENST00000488923 LRRFIP1Q32MZ4 808 aaKnown RBP7.99□□□□□ -1.13
HDLBP-243ENST00000488923 UBE3BQ7Z3V4 1068 aa7.99□□□□□ -1.13
HDLBP-243ENST00000488923 EMID1Q96A84 441 aaPredicted RBP7.99□□□□□ -1.13
HDLBP-243ENST00000488923 CDHR5Q9HBB8 845 aa7.99□□□□□ -1.13
HDLBP-243ENST00000488923 PTCD1O75127 700 aaKnown RBP7.98□□□□□ -1.13
HDLBP-243ENST00000488923 SASH1O94885 1247 aa7.98□□□□□ -1.13
HDLBP-243ENST00000488923 HSP90B1P14625 803 aaKnown RBP7.98□□□□□ -1.13
HDLBP-243ENST00000488923 ZKSCAN1P17029 563 aaPredicted RBP7.98□□□□□ -1.13
HDLBP-243ENST00000488923 ATP5JP18859 108 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms