RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 PODXL2Q9NZ53 605 aa16.19■□□□□ 0.18
PHF1-210ENST00000488767 ATP2B4P23634 1241 aa16.18■□□□□ 0.18
PHF1-210ENST00000488767 FTSJ3Q8IY81 847 aaKnown RBP16.18■□□□□ 0.18
PHF1-210ENST00000488767 GPC2Q8N158 579 aa16.18■□□□□ 0.18
PHF1-210ENST00000488767 TBC1D16Q8TBP0 767 aa16.18■□□□□ 0.18
PHF1-210ENST00000488767 SUCLG2Q96I99 432 aa16.18■□□□□ 0.18
PHF1-210ENST00000488767 ZNRF3Q9ULT6 936 aa16.18■□□□□ 0.18
PHF1-210ENST00000488767 TAF1P21675 1872 aa16.17■□□□□ 0.18
PHF1-210ENST00000488767 DDNO94850 711 aaPredicted RBP16.17■□□□□ 0.18
PHF1-210ENST00000488767 KCNJ4P48050 445 aa16.17■□□□□ 0.18
PHF1-210ENST00000488767 SLC51AQ86UW1 340 aa16.17■□□□□ 0.18
PHF1-210ENST00000488767 USP44Q9H0E7 712 aa16.17■□□□□ 0.18
PHF1-210ENST00000488767 MINPP1Q9UNW1 487 aa16.17■□□□□ 0.18
PHF1-210ENST00000488767 GJA3Q9Y6H8 435 aa16.17■□□□□ 0.18
PHF1-210ENST00000488767 KIF3CO14782 793 aa16.16■□□□□ 0.18
PHF1-210ENST00000488767 RIMBP2O15034 1052 aa16.16■□□□□ 0.18
PHF1-210ENST00000488767 TOMM70O94826 608 aa16.16■□□□□ 0.18
PHF1-210ENST00000488767 GNAI3P08754 354 aa16.16■□□□□ 0.18
PHF1-210ENST00000488767 LMOD1P29536 600 aaPredicted RBP16.16■□□□□ 0.18
PHF1-210ENST00000488767 TNIP1Q15025 636 aa16.16■□□□□ 0.18
PHF1-210ENST00000488767 LDHAL6AQ6ZMR3 332 aa16.16■□□□□ 0.18
PHF1-210ENST00000488767 BICC1Q9H694 974 aaKnown RBP16.16■□□□□ 0.18
PHF1-210ENST00000488767 CNNM1Q9NRU3 951 aa16.16■□□□□ 0.18
PHF1-210ENST00000488767 POLLQ9UGP5 575 aa16.16■□□□□ 0.18
PHF1-210ENST00000488767 ZNF541Q9H0D2 1346 aa16.16■□□□□ 0.18
PHF1-210ENST00000488767 TRIM27P14373 513 aa16.15■□□□□ 0.18
PHF1-210ENST00000488767 C1QTNF8P60827 252 aa16.15■□□□□ 0.18
PHF1-210ENST00000488767 EPHA10Q5JZY3 1008 aa16.15■□□□□ 0.18
PHF1-210ENST00000488767 INTS3Q68E01 1043 aaKnown RBP16.15■□□□□ 0.18
PHF1-210ENST00000488767 L3MBTL3Q96JM7 780 aaPredicted RBP16.15■□□□□ 0.18
PHF1-210ENST00000488767 LEMD3Q9Y2U8 911 aa16.15■□□□□ 0.18
PHF1-210ENST00000488767 MS4A1P11836 297 aa16.14■□□□□ 0.17
PHF1-210ENST00000488767 CLUAP1Q96AJ1 413 aa16.14■□□□□ 0.17
PHF1-210ENST00000488767 DUOX1Q9NRD9 1551 aa16.13■□□□□ 0.17
PHF1-210ENST00000488767 RABL6Q3YEC7 729 aaPredicted RBP16.13■□□□□ 0.17
PHF1-210ENST00000488767 CIAPIN1Q6FI81 312 aa16.13■□□□□ 0.17
PHF1-210ENST00000488767 RBM46Q8TBY0 533 aaKnown RBP16.13■□□□□ 0.17
PHF1-210ENST00000488767 HACL1Q9UJ83 578 aa16.13■□□□□ 0.17
PHF1-210ENST00000488767 WDR90Q96KV7 1748 aa16.13■□□□□ 0.17
PHF1-210ENST00000488767 COL4A1P02462 1669 aa16.12■□□□□ 0.17
PHF1-210ENST00000488767 ECE2O60344 883 aa16.12■□□□□ 0.17
PHF1-210ENST00000488767 CHRNDQ07001 517 aa16.12■□□□□ 0.17
PHF1-210ENST00000488767 DZIP1LQ8IYY4 767 aaKnown RBP16.12■□□□□ 0.17
PHF1-210ENST00000488767 KAZALD1Q96I82 304 aa16.12■□□□□ 0.17
PHF1-210ENST00000488767 DBNDD1Q9H9R9 158 aa16.12■□□□□ 0.17
PHF1-210ENST00000488767 ZNF804BA4D1E1 1349 aa16.12■□□□□ 0.17
PHF1-210ENST00000488767 MED23Q9ULK4 1368 aa16.12■□□□□ 0.17
PHF1-210ENST00000488767 CXCL9Q07325 125 aa16.11■□□□□ 0.17
PHF1-210ENST00000488767 DOK7Q18PE1 504 aa16.11■□□□□ 0.17
PHF1-210ENST00000488767 PNMA8AQ86V59 439 aaPredicted RBP16.11■□□□□ 0.17
PHF1-210ENST00000488767 ANKRD44Q8N8A2 993 aa16.11■□□□□ 0.17
PHF1-210ENST00000488767 SMC1BQ8NDV3 1235 aa16.11■□□□□ 0.17
PHF1-210ENST00000488767 YTHDC1Q96MU7 727 aaKnown RBP16.11■□□□□ 0.17
PHF1-210ENST00000488767 RCAN3Q9UKA8 241 aa16.11■□□□□ 0.17
PHF1-210ENST00000488767 SPEF2Q9C093 1822 aa16.1■□□□□ 0.17
PHF1-210ENST00000488767 RAD17O75943 681 aa16.1■□□□□ 0.17
PHF1-210ENST00000488767 FSTL1Q12841 308 aa16.1■□□□□ 0.17
PHF1-210ENST00000488767 ITPRIPQ8IWB1 547 aa16.1■□□□□ 0.17
PHF1-210ENST00000488767 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.1■□□□□ 0.17
PHF1-210ENST00000488767 ZNF594Q96JF6 807 aaPredicted RBP16.1■□□□□ 0.17
PHF1-210ENST00000488767 GPR101Q96P66 508 aaPredicted RBP16.1■□□□□ 0.17
PHF1-210ENST00000488767 COL4A5P29400 1685 aa16.1■□□□□ 0.17
PHF1-210ENST00000488767 MROH5Q6ZUA9 1318 aa16.1■□□□□ 0.17
PHF1-210ENST00000488767 LTBP1Q14766 1721 aa16.1■□□□□ 0.17
PHF1-210ENST00000488767 PLIN1O60240 522 aa16.09■□□□□ 0.17
PHF1-210ENST00000488767 GNAI2P04899 355 aa16.09■□□□□ 0.17
PHF1-210ENST00000488767 EPHX2P34913 555 aa16.09■□□□□ 0.17
PHF1-210ENST00000488767 PODNQ7Z5L7 613 aa16.09■□□□□ 0.17
PHF1-210ENST00000488767 MEIS3Q99687 375 aa16.09■□□□□ 0.17
PHF1-210ENST00000488767 LRRFIP2Q9Y608 721 aaKnown RBP16.09■□□□□ 0.17
PHF1-210ENST00000488767 EAPPQ56P03 285 aaPredicted RBP16.08■□□□□ 0.16
PHF1-210ENST00000488767 METTL24Q5JXM2 366 aa16.08■□□□□ 0.16
PHF1-210ENST00000488767 TMEM57Q8N5G2 664 aa16.08■□□□□ 0.16
PHF1-210ENST00000488767 COA1Q9GZY4 146 aa16.08■□□□□ 0.16
PHF1-210ENST00000488767 TAF1DQ9H5J8 278 aaPredicted RBP16.08■□□□□ 0.16
PHF1-210ENST00000488767 SCN4AP35499 1836 aa16.08■□□□□ 0.16
PHF1-210ENST00000488767 POTECB2RU33 542 aa16.07■□□□□ 0.16
PHF1-210ENST00000488767 TAF5LO75529 589 aa16.07■□□□□ 0.16
PHF1-210ENST00000488767 RPS12P25398 132 aaKnown RBP16.07■□□□□ 0.16
PHF1-210ENST00000488767 ZNF804AQ7Z570 1209 aa16.07■□□□□ 0.16
PHF1-210ENST00000488767 HELBQ8NG08 1087 aaPredicted RBP16.07■□□□□ 0.16
PHF1-210ENST00000488767 CLEC11AQ9Y240 323 aa16.07■□□□□ 0.16
PHF1-210ENST00000488767 YDJCA8MPS7 323 aa16.06■□□□□ 0.16
PHF1-210ENST00000488767 H7C1D1 291 aa16.06■□□□□ 0.16
PHF1-210ENST00000488767 PSMD14O00487 310 aa16.06■□□□□ 0.16
PHF1-210ENST00000488767 GMPSP49915 693 aaPredicted RBP16.06■□□□□ 0.16
PHF1-210ENST00000488767 LDHDQ86WU2 507 aa16.06■□□□□ 0.16
PHF1-210ENST00000488767 CHMP4BQ9H444 224 aaKnown RBP16.06■□□□□ 0.16
PHF1-210ENST00000488767 ADARB2Q9NS39 739 aaKnown RBP16.06■□□□□ 0.16
PHF1-210ENST00000488767 GPRC5DQ9NZD1 345 aa16.06■□□□□ 0.16
PHF1-210ENST00000488767 FBXO3Q9UK99 471 aa16.06■□□□□ 0.16
PHF1-210ENST00000488767 USP17L3A6NCW0 530 aa16.05■□□□□ 0.16
PHF1-210ENST00000488767 USP17L4A6NCW7 530 aa16.05■□□□□ 0.16
PHF1-210ENST00000488767 SRGAP3O43295 1099 aa16.05■□□□□ 0.16
PHF1-210ENST00000488767 SCNN1DP51172 638 aa16.05■□□□□ 0.16
PHF1-210ENST00000488767 UBE4AQ14139 1066 aa16.05■□□□□ 0.16
PHF1-210ENST00000488767 CHADLQ6NUI6 762 aa16.05■□□□□ 0.16
PHF1-210ENST00000488767 USP50Q70EL3 339 aaPredicted RBP16.05■□□□□ 0.16
PHF1-210ENST00000488767 USP17L1Q7RTZ2 530 aa16.05■□□□□ 0.16
PHF1-210ENST00000488767 FBXW7Q969H0 707 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms