RNA–Protein interactions for RNA: ENST00000488590.1

SUPT20H-218, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 4

Gene SUPT20H, Length 572 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-218ENST00000488590 UBE2Q1Q7Z7E8 422 aa12.49□□□□□ -0.41
SUPT20H-218ENST00000488590 NGEFQ8N5V2 710 aa12.49□□□□□ -0.41
SUPT20H-218ENST00000488590 SHISA4Q96DD7 197 aa12.49□□□□□ -0.41
SUPT20H-218ENST00000488590 POLLQ9UGP5 575 aa12.49□□□□□ -0.41
SUPT20H-218ENST00000488590 TAF1P21675 1872 aa12.48□□□□□ -0.41
SUPT20H-218ENST00000488590 LAMB2P55268 1798 aa12.48□□□□□ -0.41
SUPT20H-218ENST00000488590 A0A1W2PPC1 479 aa12.48□□□□□ -0.41
SUPT20H-218ENST00000488590 RIMBP2O15034 1052 aa12.48□□□□□ -0.41
SUPT20H-218ENST00000488590 GRAPQ13588 217 aa12.48□□□□□ -0.41
SUPT20H-218ENST00000488590 GRAPLQ8TC17 118 aaPredicted RBP12.48□□□□□ -0.41
SUPT20H-218ENST00000488590 GMLQ99445 158 aa12.48□□□□□ -0.41
SUPT20H-218ENST00000488590 ZBTB3Q9H5J0 574 aa12.48□□□□□ -0.41
SUPT20H-218ENST00000488590 STXBP5LQ9Y2K9 1186 aa12.48□□□□□ -0.41
SUPT20H-218ENST00000488590 ANKRD36CQ5JPF3 1778 aa12.48□□□□□ -0.41
SUPT20H-218ENST00000488590 COL4A1P02462 1669 aa12.48□□□□□ -0.41
SUPT20H-218ENST00000488590 TTC28Q96AY4 2481 aa12.47□□□□□ -0.41
SUPT20H-218ENST00000488590 INHBEP58166 350 aa12.47□□□□□ -0.41
SUPT20H-218ENST00000488590 GIGYF2Q6Y7W6 1299 aaKnown RBP12.47□□□□□ -0.41
SUPT20H-218ENST00000488590 PHACTR3Q96KR7 559 aa12.47□□□□□ -0.41
SUPT20H-218ENST00000488590 PTCH2Q9Y6C5 1203 aa12.47□□□□□ -0.41
SUPT20H-218ENST00000488590 LAMB1P07942 1786 aa12.47□□□□□ -0.41
SUPT20H-218ENST00000488590 ERBB4Q15303 1308 aa12.46□□□□□ -0.41
SUPT20H-218ENST00000488590 EYSQ5T1H1 3165 aa12.46□□□□□ -0.41
SUPT20H-218ENST00000488590 DIAPH1O60610 1272 aaKnown RBP12.46□□□□□ -0.41
SUPT20H-218ENST00000488590 CRHR2Q13324 411 aa12.46□□□□□ -0.41
SUPT20H-218ENST00000488590 SLC4A8Q2Y0W8 1093 aa12.46□□□□□ -0.41
SUPT20H-218ENST00000488590 PPP1R42Q7Z4L9 355 aa12.46□□□□□ -0.41
SUPT20H-218ENST00000488590 DPF3Q92784 378 aa12.46□□□□□ -0.41
SUPT20H-218ENST00000488590 MYOZ2Q9NPC6 264 aa12.46□□□□□ -0.41
SUPT20H-218ENST00000488590 PRDM6Q9NQX0 595 aa12.46□□□□□ -0.41
SUPT20H-218ENST00000488590 MANSC4A6NHS7 340 aaPredicted RBP12.45□□□□□ -0.42
SUPT20H-218ENST00000488590 ZBTB7BO15156 539 aaPredicted RBP12.45□□□□□ -0.42
SUPT20H-218ENST00000488590 HCLS1P14317 486 aaPredicted RBP12.45□□□□□ -0.42
SUPT20H-218ENST00000488590 GPSM2P81274 684 aa12.45□□□□□ -0.42
SUPT20H-218ENST00000488590 SP3Q02447 781 aa12.45□□□□□ -0.42
SUPT20H-218ENST00000488590 TTLL12Q14166 644 aaPredicted RBP12.45□□□□□ -0.42
SUPT20H-218ENST00000488590 NBPF9Q3BBW0 867 aa12.45□□□□□ -0.42
SUPT20H-218ENST00000488590 SLC9C1Q4G0N8 1177 aa12.45□□□□□ -0.42
SUPT20H-218ENST00000488590 PARP10Q53GL7 1025 aa12.45□□□□□ -0.42
SUPT20H-218ENST00000488590 RSBN1LQ6PCB5 846 aaPredicted RBP12.45□□□□□ -0.42
SUPT20H-218ENST00000488590 NECTIN2Q92692 538 aa12.45□□□□□ -0.42
SUPT20H-218ENST00000488590 NSFL1CQ9UNZ2 370 aaKnown RBP12.45□□□□□ -0.42
SUPT20H-218ENST00000488590 LAMB4A4D0S4 1761 aa12.45□□□□□ -0.42
SUPT20H-218ENST00000488590 COL3A1P02461 1466 aaPredicted RBP12.45□□□□□ -0.42
SUPT20H-218ENST00000488590 DDX60Q8IY21 1712 aaKnown RBP12.45□□□□□ -0.42
SUPT20H-218ENST00000488590 MYCP01106 439 aaPredicted RBP12.44□□□□□ -0.42
SUPT20H-218ENST00000488590 TCIRG1Q13488 830 aa12.44□□□□□ -0.42
SUPT20H-218ENST00000488590 GPR153Q6NV75 609 aa12.44□□□□□ -0.42
SUPT20H-218ENST00000488590 KIF6Q6ZMV9 814 aa12.44□□□□□ -0.42
SUPT20H-218ENST00000488590 DDX46Q7L014 1031 aaKnown RBP12.44□□□□□ -0.42
SUPT20H-218ENST00000488590 Q7L0L9 218 aa12.44□□□□□ -0.42
SUPT20H-218ENST00000488590 LRP10Q7Z4F1 713 aa12.44□□□□□ -0.42
SUPT20H-218ENST00000488590 NBPF11Q86T75 865 aa12.44□□□□□ -0.42
SUPT20H-218ENST00000488590 AGBL3Q8NEM8 1001 aa12.44□□□□□ -0.42
SUPT20H-218ENST00000488590 PTPN18Q99952 460 aa12.44□□□□□ -0.42
SUPT20H-218ENST00000488590 UTP14AQ9BVJ6 771 aaKnown RBP12.44□□□□□ -0.42
SUPT20H-218ENST00000488590 FZD1Q9UP38 647 aa12.44□□□□□ -0.42
SUPT20H-218ENST00000488590 AMER1Q5JTC6 1135 aaPredicted RBP12.43□□□□□ -0.42
SUPT20H-218ENST00000488590 TMC4Q7Z404 712 aa12.43□□□□□ -0.42
SUPT20H-218ENST00000488590 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.43□□□□□ -0.42
SUPT20H-218ENST00000488590 DEFB123Q8N688 67 aa12.43□□□□□ -0.42
SUPT20H-218ENST00000488590 TBC1D16Q8TBP0 767 aa12.43□□□□□ -0.42
SUPT20H-218ENST00000488590 SH3TC2Q8TF17 1288 aa12.43□□□□□ -0.42
SUPT20H-218ENST00000488590 CELF1Q92879 486 aaKnown RBP12.43□□□□□ -0.42
SUPT20H-218ENST00000488590 POLR3GLQ9BT43 218 aa12.43□□□□□ -0.42
SUPT20H-218ENST00000488590 MTMR10Q9NXD2 777 aa12.43□□□□□ -0.42
SUPT20H-218ENST00000488590 C6orf229H3BNL8 230 aa12.42□□□□□ -0.42
SUPT20H-218ENST00000488590 USP17L8P0C7I0 530 aa12.42□□□□□ -0.42
SUPT20H-218ENST00000488590 ZBTB48P10074 688 aaPredicted RBP12.42□□□□□ -0.42
SUPT20H-218ENST00000488590 PRKG1Q13976 671 aa12.42□□□□□ -0.42
SUPT20H-218ENST00000488590 MCM10Q7L590 875 aa12.42□□□□□ -0.42
SUPT20H-218ENST00000488590 RRP7AQ9Y3A4 280 aaKnown RBP12.42□□□□□ -0.42
SUPT20H-218ENST00000488590 TESPA1A2RU30 521 aaPredicted RBP12.41□□□□□ -0.42
SUPT20H-218ENST00000488590 MYL6BP14649 208 aa12.41□□□□□ -0.42
SUPT20H-218ENST00000488590 GJA5P36382 358 aa12.41□□□□□ -0.42
SUPT20H-218ENST00000488590 ARMC9Q7Z3E5 817 aa12.41□□□□□ -0.42
SUPT20H-218ENST00000488590 WNK4Q96J92 1243 aa12.41□□□□□ -0.42
SUPT20H-218ENST00000488590 CLMNQ96JQ2 1002 aa12.41□□□□□ -0.42
SUPT20H-218ENST00000488590 PSME4Q14997 1843 aa12.41□□□□□ -0.42
SUPT20H-218ENST00000488590 PRUNE2Q8WUY3 3088 aa12.4□□□□□ -0.42
SUPT20H-218ENST00000488590 ZNF646O15015 1829 aaPredicted RBP12.4□□□□□ -0.42
SUPT20H-218ENST00000488590 WNT10BO00744 389 aa12.4□□□□□ -0.42
SUPT20H-218ENST00000488590 DCTN1Q14203 1278 aa12.4□□□□□ -0.42
SUPT20H-218ENST00000488590 MTFR1Q15390 333 aa12.4□□□□□ -0.42
SUPT20H-218ENST00000488590 MAP3K11Q16584 847 aa12.4□□□□□ -0.42
SUPT20H-218ENST00000488590 MIS18AQ9NYP9 233 aa12.4□□□□□ -0.42
SUPT20H-218ENST00000488590 STAP2Q9UGK3 403 aa12.4□□□□□ -0.42
SUPT20H-218ENST00000488590 ANGEL1Q9UNK9 670 aaKnown RBP12.4□□□□□ -0.42
SUPT20H-218ENST00000488590 SSC5DA1L4H1 1573 aa12.39□□□□□ -0.43
SUPT20H-218ENST00000488590 NF2P35240 595 aa12.39□□□□□ -0.43
SUPT20H-218ENST00000488590 ANKRD13DQ6ZTN6 518 aa12.39□□□□□ -0.43
SUPT20H-218ENST00000488590 NLRP10Q86W26 655 aa12.39□□□□□ -0.43
SUPT20H-218ENST00000488590 EYA3Q99504 573 aa12.39□□□□□ -0.43
SUPT20H-218ENST00000488590 NR2E3Q9Y5X4 410 aa12.39□□□□□ -0.43
SUPT20H-218ENST00000488590 SLC10A4Q96EP9 437 aa12.38□□□□□ -0.43
SUPT20H-218ENST00000488590 HTATIP2Q9BUP3 242 aa12.38□□□□□ -0.43
SUPT20H-218ENST00000488590 ZC3H12CQ9C0D7 883 aaKnown RBP12.38□□□□□ -0.43
SUPT20H-218ENST00000488590 PODXL2Q9NZ53 605 aa12.38□□□□□ -0.43
SUPT20H-218ENST00000488590 U2SURPO15042 1029 aaKnown RBP12.37□□□□□ -0.43
SUPT20H-218ENST00000488590 GJA8P48165 433 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms