RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-208ENST00000488571 CDC37L1Q7L3B6 337 aa14.84□□□□□ -0.03
SNU13-208ENST00000488571 MICALL2Q8IY33 904 aa14.84□□□□□ -0.03
SNU13-208ENST00000488571 PLCD3Q8N3E9 789 aa14.84□□□□□ -0.03
SNU13-208ENST00000488571 PLBD2Q8NHP8 589 aa14.84□□□□□ -0.03
SNU13-208ENST00000488571 CELF1Q92879 486 aaKnown RBP14.84□□□□□ -0.03
SNU13-208ENST00000488571 ISCA1Q9BUE6 129 aa14.84□□□□□ -0.03
SNU13-208ENST00000488571 PSMD14O00487 310 aa14.83□□□□□ -0.04
SNU13-208ENST00000488571 SF3B3Q15393 1217 aaKnown RBP14.83□□□□□ -0.04
SNU13-208ENST00000488571 FAM161AQ3B820 660 aa14.83□□□□□ -0.04
SNU13-208ENST00000488571 FAM89AQ96GI7 184 aa14.83□□□□□ -0.04
SNU13-208ENST00000488571 ZNF408Q9H9D4 720 aa14.83□□□□□ -0.04
SNU13-208ENST00000488571 ATP5J2-PTCD1G3V325 749 aa14.82□□□□□ -0.04
SNU13-208ENST00000488571 EGFRP00533 1210 aa14.82□□□□□ -0.04
SNU13-208ENST00000488571 BRPF1P55201 1214 aaPredicted RBP14.82□□□□□ -0.04
SNU13-208ENST00000488571 WASHC4Q2M389 1173 aa14.82□□□□□ -0.04
SNU13-208ENST00000488571 HDGFL1Q5TGJ6 251 aa14.82□□□□□ -0.04
SNU13-208ENST00000488571 ANKRD13DQ6ZTN6 518 aa14.82□□□□□ -0.04
SNU13-208ENST00000488571 SAMD7Q7Z3H4 446 aa14.82□□□□□ -0.04
SNU13-208ENST00000488571 DPF2Q92785 391 aa14.82□□□□□ -0.04
SNU13-208ENST00000488571 ZIC5Q96T25 663 aa14.82□□□□□ -0.04
SNU13-208ENST00000488571 DBNDD1Q9H9R9 158 aa14.82□□□□□ -0.04
SNU13-208ENST00000488571 KCNQ5Q9NR82 932 aa14.82□□□□□ -0.04
SNU13-208ENST00000488571 POLLQ9UGP5 575 aa14.82□□□□□ -0.04
SNU13-208ENST00000488571 LAS1LQ9Y4W2 734 aaKnown RBP14.82□□□□□ -0.04
SNU13-208ENST00000488571 CASP8AP2Q9UKL3 1982 aa14.82□□□□□ -0.04
SNU13-208ENST00000488571 H7C1D1 291 aa14.81□□□□□ -0.04
SNU13-208ENST00000488571 CA12O43570 354 aa14.81□□□□□ -0.04
SNU13-208ENST00000488571 HOXB7P09629 217 aa14.81□□□□□ -0.04
SNU13-208ENST00000488571 GPSM2P81274 684 aa14.81□□□□□ -0.04
SNU13-208ENST00000488571 USP48Q86UV5 1035 aa14.81□□□□□ -0.04
SNU13-208ENST00000488571 DBF4Q9UBU7 674 aaPredicted RBP14.81□□□□□ -0.04
SNU13-208ENST00000488571 NSFL1CQ9UNZ2 370 aaKnown RBP14.81□□□□□ -0.04
SNU13-208ENST00000488571 POLR2AP24928 1970 aaKnown RBP14.81□□□□□ -0.04
SNU13-208ENST00000488571 SCN9AQ15858 1988 aa14.81□□□□□ -0.04
SNU13-208ENST00000488571 RTL9Q8NET4 1388 aa14.81□□□□□ -0.04
SNU13-208ENST00000488571 CCDC85CA6NKD9 419 aa14.8□□□□□ -0.04
SNU13-208ENST00000488571 RIMBP2O15034 1052 aa14.8□□□□□ -0.04
SNU13-208ENST00000488571 RUNDC1Q96C34 613 aa14.8□□□□□ -0.04
SNU13-208ENST00000488571 MYBBP1AQ9BQG0 1328 aaKnown RBP14.8□□□□□ -0.04
SNU13-208ENST00000488571 ECE2O60344 883 aa14.79□□□□□ -0.04
SNU13-208ENST00000488571 RGS19P49795 217 aa14.79□□□□□ -0.04
SNU13-208ENST00000488571 TRIM28Q13263 835 aaKnown RBP14.79□□□□□ -0.04
SNU13-208ENST00000488571 TBC1D10BQ4KMP7 808 aaPredicted RBP14.79□□□□□ -0.04
SNU13-208ENST00000488571 RTL5Q5HYW3 569 aaPredicted RBP14.79□□□□□ -0.04
SNU13-208ENST00000488571 FAM155AB1AL88 458 aaPredicted RBP14.78□□□□□ -0.04
SNU13-208ENST00000488571 C6orf229H3BNL8 230 aa14.78□□□□□ -0.04
SNU13-208ENST00000488571 HUNKP57058 714 aa14.78□□□□□ -0.04
SNU13-208ENST00000488571 NOGQ13253 232 aa14.78□□□□□ -0.04
SNU13-208ENST00000488571 DOK7Q18PE1 504 aa14.78□□□□□ -0.04
SNU13-208ENST00000488571 DUSP27Q5VZP5 1158 aa14.78□□□□□ -0.04
SNU13-208ENST00000488571 KRT26Q7Z3Y9 468 aa14.78□□□□□ -0.04
SNU13-208ENST00000488571 TBC1D16Q8TBP0 767 aa14.78□□□□□ -0.04
SNU13-208ENST00000488571 CFAP44Q96MT7 982 aa14.78□□□□□ -0.04
SNU13-208ENST00000488571 MCOLN1Q9GZU1 580 aa14.78□□□□□ -0.04
SNU13-208ENST00000488571 HYPKQ9NX55 129 aa14.78□□□□□ -0.04
SNU13-208ENST00000488571 ADM5C9JUS6 153 aa14.77□□□□□ -0.05
SNU13-208ENST00000488571 IRS4O14654 1257 aaPredicted RBP14.77□□□□□ -0.05
SNU13-208ENST00000488571 RPS12P25398 132 aaKnown RBP14.77□□□□□ -0.05
SNU13-208ENST00000488571 RPS8P62241 208 aaKnown RBP14.77□□□□□ -0.05
SNU13-208ENST00000488571 ADAMTS8Q9UP79 889 aa14.77□□□□□ -0.05
SNU13-208ENST00000488571 PSME4Q14997 1843 aa14.76□□□□□ -0.05
SNU13-208ENST00000488571 MLLT1Q03111 559 aaPredicted RBP14.76□□□□□ -0.05
SNU13-208ENST00000488571 RBM26Q5T8P6 1007 aaKnown RBP14.76□□□□□ -0.05
SNU13-208ENST00000488571 GBA2Q9HCG7 927 aaPredicted RBP14.76□□□□□ -0.05
SNU13-208ENST00000488571 SEC31BQ9NQW1 1179 aa14.76□□□□□ -0.05
SNU13-208ENST00000488571 MBIPQ9NS73 344 aa14.76□□□□□ -0.05
SNU13-208ENST00000488571 PODXL2Q9NZ53 605 aa14.76□□□□□ -0.05
SNU13-208ENST00000488571 ASTN2O75129 1339 aaPredicted RBP14.75□□□□□ -0.05
SNU13-208ENST00000488571 VIL1P09327 827 aaKnown RBP14.75□□□□□ -0.05
SNU13-208ENST00000488571 ZNF853P0CG23 659 aa14.75□□□□□ -0.05
SNU13-208ENST00000488571 RGMBQ6NW40 437 aa14.75□□□□□ -0.05
SNU13-208ENST00000488571 ZBTB38Q8NAP3 1195 aaPredicted RBP14.75□□□□□ -0.05
SNU13-208ENST00000488571 EYA3Q99504 573 aa14.75□□□□□ -0.05
SNU13-208ENST00000488571 PHAXQ9H814 394 aaKnown RBP14.75□□□□□ -0.05
SNU13-208ENST00000488571 ZNF609O15014 1411 aa14.75□□□□□ -0.05
SNU13-208ENST00000488571 DDX10Q13206 875 aaKnown RBP14.74□□□□□ -0.05
SNU13-208ENST00000488571 DGKZQ13574 1117 aa14.74□□□□□ -0.05
SNU13-208ENST00000488571 WDR43Q15061 677 aaKnown RBP eCLIP14.74□□□□□ -0.05
SNU13-208ENST00000488571 KIF4BQ2VIQ3 1234 aa14.74□□□□□ -0.05
SNU13-208ENST00000488571 RASEFQ8IZ41 740 aa14.74□□□□□ -0.05
SNU13-208ENST00000488571 DCPSQ96C86 337 aaKnown RBP14.74□□□□□ -0.05
SNU13-208ENST00000488571 MS4A3Q96HJ5 214 aa14.74□□□□□ -0.05
SNU13-208ENST00000488571 FBXO3Q9UK99 471 aa14.74□□□□□ -0.05
SNU13-208ENST00000488571 SLC34A2O95436 690 aa14.73□□□□□ -0.05
SNU13-208ENST00000488571 RIC3Q7Z5B4 369 aa14.73□□□□□ -0.05
SNU13-208ENST00000488571 C2orf69Q8N8R5 385 aa14.73□□□□□ -0.05
SNU13-208ENST00000488571 ZC3H12CQ9C0D7 883 aaKnown RBP14.73□□□□□ -0.05
SNU13-208ENST00000488571 GGA3Q9NZ52 723 aa14.73□□□□□ -0.05
SNU13-208ENST00000488571 ZBTB47Q9UFB7 747 aaPredicted RBP14.73□□□□□ -0.05
SNU13-208ENST00000488571 UFL1O94874 794 aa14.72□□□□□ -0.05
SNU13-208ENST00000488571 PCCAP05165 728 aaPredicted RBP14.72□□□□□ -0.05
SNU13-208ENST00000488571 KIF23Q02241 960 aaPredicted RBP14.72□□□□□ -0.05
SNU13-208ENST00000488571 GOLGA2Q08379 1002 aa14.72□□□□□ -0.05
SNU13-208ENST00000488571 MYD88Q99836 296 aa14.72□□□□□ -0.05
SNU13-208ENST00000488571 ZNF646O15015 1829 aaPredicted RBP14.71□□□□□ -0.05
SNU13-208ENST00000488571 AKAP11Q9UKA4 1901 aa14.71□□□□□ -0.05
SNU13-208ENST00000488571 ELL2O00472 640 aaPredicted RBP14.71□□□□□ -0.05
SNU13-208ENST00000488571 ZNF157P51786 506 aaPredicted RBP14.71□□□□□ -0.05
SNU13-208ENST00000488571 ZNF280AP59817 542 aaPredicted RBP14.71□□□□□ -0.05
SNU13-208ENST00000488571 JARID2Q92833 1246 aaPredicted RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 150.4 ms