RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 ATP2B3Q16720 1220 aa24.46■■□□□ 1.51
NECAB3-213ENST00000488489 DDX46Q7L014 1031 aaKnown RBP24.46■■□□□ 1.51
NECAB3-213ENST00000488489 PROM2Q8N271 834 aa24.46■■□□□ 1.51
NECAB3-213ENST00000488489 SPRYD3Q8NCJ5 442 aa24.46■■□□□ 1.51
NECAB3-213ENST00000488489 RTL9Q8NET4 1388 aa24.45■■□□□ 1.5
NECAB3-213ENST00000488489 A0A0D9SFI3 127 aa24.45■■□□□ 1.5
NECAB3-213ENST00000488489 HIP1O00291 1037 aa24.45■■□□□ 1.5
NECAB3-213ENST00000488489 PDE8BO95263 885 aa24.45■■□□□ 1.5
NECAB3-213ENST00000488489 SLC27A3Q5K4L6 730 aa24.45■■□□□ 1.5
NECAB3-213ENST00000488489 CHGBP05060 677 aa24.44■■□□□ 1.5
NECAB3-213ENST00000488489 SLKQ9H2G2 1235 aaPredicted RBP24.44■■□□□ 1.5
NECAB3-213ENST00000488489 COL4A1P02462 1669 aa24.44■■□□□ 1.5
NECAB3-213ENST00000488489 ABCC12Q96J65 1359 aa24.44■■□□□ 1.5
NECAB3-213ENST00000488489 HSPA4P34932 840 aa24.44■■□□□ 1.5
NECAB3-213ENST00000488489 HELBQ8NG08 1087 aaPredicted RBP24.44■■□□□ 1.5
NECAB3-213ENST00000488489 IFIT1P09914 478 aaKnown RBP24.43■■□□□ 1.5
NECAB3-213ENST00000488489 PTH1RQ03431 593 aa24.43■■□□□ 1.5
NECAB3-213ENST00000488489 SLC10A5Q5PT55 438 aa24.43■■□□□ 1.5
NECAB3-213ENST00000488489 UBR3Q6ZT12 1888 aa24.43■■□□□ 1.5
NECAB3-213ENST00000488489 COL24A1Q17RW2 1714 aa24.43■■□□□ 1.5
NECAB3-213ENST00000488489 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.43■■□□□ 1.5
NECAB3-213ENST00000488489 GOLIM4O00461 696 aa24.43■■□□□ 1.5
NECAB3-213ENST00000488489 MCCP23508 829 aa24.43■■□□□ 1.5
NECAB3-213ENST00000488489 KIAA1211Q6ZU35 1233 aa24.43■■□□□ 1.5
NECAB3-213ENST00000488489 ANTXR1Q9H6X2 564 aa24.43■■□□□ 1.5
NECAB3-213ENST00000488489 SNRKQ9NRH2 765 aa24.43■■□□□ 1.5
NECAB3-213ENST00000488489 PAG1Q9NWQ8 432 aa24.43■■□□□ 1.5
NECAB3-213ENST00000488489 GTF2E1P29083 439 aaPredicted RBP24.42■■□□□ 1.5
NECAB3-213ENST00000488489 SF3B3Q15393 1217 aaKnown RBP24.42■■□□□ 1.5
NECAB3-213ENST00000488489 CCDC158Q5M9N0 1113 aa24.42■■□□□ 1.5
NECAB3-213ENST00000488489 GORABQ5T7V8 394 aa24.42■■□□□ 1.5
NECAB3-213ENST00000488489 NBPF5PQ86XG9 351 aaPredicted RBP24.42■■□□□ 1.5
NECAB3-213ENST00000488489 MPHOSPH8Q99549 860 aa24.42■■□□□ 1.5
NECAB3-213ENST00000488489 MROH5Q6ZUA9 1318 aa24.42■■□□□ 1.5
NECAB3-213ENST00000488489 RXRBP28702 533 aa24.41■■□□□ 1.5
NECAB3-213ENST00000488489 ANAPC15P60006 121 aa24.41■■□□□ 1.5
NECAB3-213ENST00000488489 KBTBD3Q8NAB2 608 aa24.41■■□□□ 1.5
NECAB3-213ENST00000488489 FBXO41Q8TF61 875 aa24.41■■□□□ 1.5
NECAB3-213ENST00000488489 SCARF1Q14162 830 aa24.41■■□□□ 1.5
NECAB3-213ENST00000488489 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.41■■□□□ 1.5
NECAB3-213ENST00000488489 IL17RAQ96F46 866 aa24.41■■□□□ 1.5
NECAB3-213ENST00000488489 NYXQ9GZU5 481 aa24.41■■□□□ 1.5
NECAB3-213ENST00000488489 CASZ1Q86V15 1759 aa24.41■■□□□ 1.5
NECAB3-213ENST00000488489 TXNRD1Q16881 649 aa24.4■■□□□ 1.5
NECAB3-213ENST00000488489 TTC39AQ5SRH9 613 aa24.4■■□□□ 1.5
NECAB3-213ENST00000488489 CCDC24Q8N4L8 307 aa24.4■■□□□ 1.5
NECAB3-213ENST00000488489 RGS17Q9UGC6 210 aaPredicted RBP24.4■■□□□ 1.5
NECAB3-213ENST00000488489 SPEF2Q9C093 1822 aa24.4■■□□□ 1.5
NECAB3-213ENST00000488489 TAF1P21675 1872 aa24.4■■□□□ 1.5
NECAB3-213ENST00000488489 SNAP23O00161 211 aa24.4■■□□□ 1.5
NECAB3-213ENST00000488489 ADRA2BP18089 450 aa24.4■■□□□ 1.5
NECAB3-213ENST00000488489 MED23Q9ULK4 1368 aa24.39■■□□□ 1.5
NECAB3-213ENST00000488489 K7ELQ4 463 aaPredicted RBP24.39■■□□□ 1.49
NECAB3-213ENST00000488489 TAF5LO75529 589 aa24.39■■□□□ 1.49
NECAB3-213ENST00000488489 FGFR2P21802 821 aa24.39■■□□□ 1.49
NECAB3-213ENST00000488489 IGHMBP2P38935 993 aaKnown RBP24.39■■□□□ 1.49
NECAB3-213ENST00000488489 ZNF589Q86UQ0 364 aaPredicted RBP24.39■■□□□ 1.49
NECAB3-213ENST00000488489 RFX7Q2KHR2 1363 aa24.39■■□□□ 1.49
NECAB3-213ENST00000488489 TPTE2Q6XPS3 522 aa24.38■■□□□ 1.49
NECAB3-213ENST00000488489 FKBP4Q02790 459 aaKnown RBP eCLIP24.38■■□□□ 1.491e-6■■■■■ 28.9
NECAB3-213ENST00000488489 NFIXQ14938 502 aa24.38■■□□□ 1.49
NECAB3-213ENST00000488489 PUM3Q15397 648 aaKnown RBP24.38■■□□□ 1.49
NECAB3-213ENST00000488489 CCDC171Q6TFL3 1326 aa24.38■■□□□ 1.49
NECAB3-213ENST00000488489 SLFNL1Q499Z3 407 aa24.37■■□□□ 1.49
NECAB3-213ENST00000488489 PI16Q6UXB8 463 aa24.37■■□□□ 1.49
NECAB3-213ENST00000488489 RASEFQ8IZ41 740 aa24.37■■□□□ 1.49
NECAB3-213ENST00000488489 LPIN2Q92539 896 aa24.37■■□□□ 1.49
NECAB3-213ENST00000488489 SEC62Q99442 399 aaKnown RBP24.37■■□□□ 1.49
NECAB3-213ENST00000488489 NEK4P51957 841 aa24.36■■□□□ 1.49
NECAB3-213ENST00000488489 CDC5LQ99459 802 aaKnown RBP24.36■■□□□ 1.49
NECAB3-213ENST00000488489 SNX14Q9Y5W7 946 aa24.36■■□□□ 1.49
NECAB3-213ENST00000488489 MAP4K1Q92918 833 aa24.35■■□□□ 1.49
NECAB3-213ENST00000488489 BRPF3Q9ULD4 1205 aa24.35■■□□□ 1.49
NECAB3-213ENST00000488489 AKAP11Q9UKA4 1901 aa24.35■■□□□ 1.49
NECAB3-213ENST00000488489 GYS1P13807 737 aa24.35■■□□□ 1.49
NECAB3-213ENST00000488489 SSFA2P28290 1259 aa24.35■■□□□ 1.49
NECAB3-213ENST00000488489 MCAMP43121 646 aa24.35■■□□□ 1.49
NECAB3-213ENST00000488489 ZAP70P43403 619 aa24.35■■□□□ 1.49
NECAB3-213ENST00000488489 NLRP3Q96P20 1036 aa24.35■■□□□ 1.49
NECAB3-213ENST00000488489 ST18O60284 1047 aa24.34■■□□□ 1.49
NECAB3-213ENST00000488489 CHRNDQ07001 517 aa24.34■■□□□ 1.49
NECAB3-213ENST00000488489 PLSCR1O15162 318 aa24.34■■□□□ 1.49
NECAB3-213ENST00000488489 APBA3O96018 575 aa24.34■■□□□ 1.49
NECAB3-213ENST00000488489 PHKA1P46020 1223 aa24.34■■□□□ 1.49
NECAB3-213ENST00000488489 NECTIN1Q15223 517 aa24.34■■□□□ 1.49
NECAB3-213ENST00000488489 CCDC102BQ68D86 513 aa24.34■■□□□ 1.49
NECAB3-213ENST00000488489 CELF1Q92879 486 aaKnown RBP24.34■■□□□ 1.49
NECAB3-213ENST00000488489 ZNF512BQ96KM6 892 aaPredicted RBP24.34■■□□□ 1.49
NECAB3-213ENST00000488489 POTEAQ6S8J7 498 aa24.33■■□□□ 1.49
NECAB3-213ENST00000488489 CCDC129Q6ZRS4 1044 aa24.33■■□□□ 1.49
NECAB3-213ENST00000488489 ANKRD18AQ8IVF6 992 aa24.33■■□□□ 1.49
NECAB3-213ENST00000488489 UPF3BQ9BZI7 483 aaKnown RBP24.33■■□□□ 1.49
NECAB3-213ENST00000488489 CARMIL3Q8ND23 1372 aa24.33■■□□□ 1.49
NECAB3-213ENST00000488489 PRPF40BQ6NWY9 871 aaKnown RBP24.32■■□□□ 1.48
NECAB3-213ENST00000488489 RTN4Q9NQC3 1192 aaKnown RBP24.32■■□□□ 1.48
NECAB3-213ENST00000488489 RBM8AQ9Y5S9 174 aaKnown RBP24.32■■□□□ 1.48
NECAB3-213ENST00000488489 MCMDC2Q4G0Z9 681 aa24.32■■□□□ 1.48
NECAB3-213ENST00000488489 BSDC1Q9NW68 430 aaPredicted RBP24.32■■□□□ 1.48
NECAB3-213ENST00000488489 TICAM2Q86XR7 235 aa24.31■■□□□ 1.48
NECAB3-213ENST00000488489 KCNB2Q92953 911 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms