RNA–Protein interactions for RNA: ENST00000488391.5

LCN2-206, Transcript of lipocalin 2, humanhuman

TSL 2

Gene LCN2, Length 485 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-206ENST00000488391 ECE2O60344 883 aa14.21□□□□□ -0.13
LCN2-206ENST00000488391 RPS12P25398 132 aaKnown RBP14.21□□□□□ -0.13
LCN2-206ENST00000488391 WDR43Q15061 677 aaKnown RBP eCLIP14.21□□□□□ -0.13
LCN2-206ENST00000488391 FAM89AQ96GI7 184 aa14.21□□□□□ -0.13
LCN2-206ENST00000488391 DUOX1Q9NRD9 1551 aa14.21□□□□□ -0.14
LCN2-206ENST00000488391 SLC10A3P09131 477 aa14.2□□□□□ -0.14
LCN2-206ENST00000488391 RIPK4P57078 832 aa14.2□□□□□ -0.14
LCN2-206ENST00000488391 HNRNPUQ00839 825 aaKnown RBP eCLIP14.2□□□□□ -0.14
LCN2-206ENST00000488391 KIF4BQ2VIQ3 1234 aa14.2□□□□□ -0.14
LCN2-206ENST00000488391 RTL5Q5HYW3 569 aaPredicted RBP14.2□□□□□ -0.14
LCN2-206ENST00000488391 CTU1Q7Z7A3 348 aaKnown RBP14.2□□□□□ -0.14
LCN2-206ENST00000488391 SULF1Q8IWU6 871 aa14.2□□□□□ -0.14
LCN2-206ENST00000488391 GGA3Q9NZ52 723 aa14.2□□□□□ -0.14
LCN2-206ENST00000488391 RTL9Q8NET4 1388 aa14.2□□□□□ -0.14
LCN2-206ENST00000488391 CDCA5Q96FF9 252 aa14.19□□□□□ -0.14
LCN2-206ENST00000488391 EYA3Q99504 573 aa14.19□□□□□ -0.14
LCN2-206ENST00000488391 PNNQ9H307 717 aaKnown RBP14.19□□□□□ -0.14
LCN2-206ENST00000488391 ATP5J2-PTCD1G3V325 749 aa14.18□□□□□ -0.14
LCN2-206ENST00000488391 VIL1P09327 827 aaKnown RBP14.18□□□□□ -0.14
LCN2-206ENST00000488391 SF3B3Q15393 1217 aaKnown RBP14.18□□□□□ -0.14
LCN2-206ENST00000488391 KRT24Q2M2I5 525 aa14.18□□□□□ -0.14
LCN2-206ENST00000488391 TBC1D16Q8TBP0 767 aa14.18□□□□□ -0.14
LCN2-206ENST00000488391 ZC3H12CQ9C0D7 883 aaKnown RBP14.18□□□□□ -0.14
LCN2-206ENST00000488391 ZBED9Q6R2W3 1325 aa14.17□□□□□ -0.14
LCN2-206ENST00000488391 G3V3G9 751 aa14.17□□□□□ -0.14
LCN2-206ENST00000488391 RPS8P62241 208 aaKnown RBP14.17□□□□□ -0.14
LCN2-206ENST00000488391 SCARF1Q14162 830 aa14.17□□□□□ -0.14
LCN2-206ENST00000488391 DCAF8Q5TAQ9 597 aa14.17□□□□□ -0.14
LCN2-206ENST00000488391 PRPF38BQ5VTL8 546 aaKnown RBP14.17□□□□□ -0.14
LCN2-206ENST00000488391 HPS5Q9UPZ3 1129 aa14.17□□□□□ -0.14
LCN2-206ENST00000488391 TBC1D8O95759 1140 aa14.16□□□□□ -0.14
LCN2-206ENST00000488391 ANGEL2Q5VTE6 544 aaKnown RBP14.16□□□□□ -0.14
LCN2-206ENST00000488391 ANKRD13DQ6ZTN6 518 aa14.16□□□□□ -0.14
LCN2-206ENST00000488391 MOB2Q70IA6 237 aa14.16□□□□□ -0.14
LCN2-206ENST00000488391 RASAL3Q86YV0 1011 aa14.16□□□□□ -0.14
LCN2-206ENST00000488391 ISCA1Q9BUE6 129 aa14.16□□□□□ -0.14
LCN2-206ENST00000488391 BABAM1Q9NWV8 329 aa14.16□□□□□ -0.14
LCN2-206ENST00000488391 CHPF2Q9P2E5 772 aa14.16□□□□□ -0.14
LCN2-206ENST00000488391 HDAC9Q9UKV0 1011 aa14.16□□□□□ -0.14
LCN2-206ENST00000488391 ADAMTS8Q9UP79 889 aa14.16□□□□□ -0.14
LCN2-206ENST00000488391 SCAF8Q9UPN6 1271 aaKnown RBP14.16□□□□□ -0.14
LCN2-206ENST00000488391 LRRC37AA6NMS7 1700 aa14.15□□□□□ -0.14
LCN2-206ENST00000488391 SCN9AQ15858 1988 aa14.15□□□□□ -0.14
LCN2-206ENST00000488391 REM2Q8IYK8 340 aaPredicted RBP14.15□□□□□ -0.14
LCN2-206ENST00000488391 PLBD2Q8NHP8 589 aa14.15□□□□□ -0.14
LCN2-206ENST00000488391 LAS1LQ9Y4W2 734 aaKnown RBP14.15□□□□□ -0.14
LCN2-206ENST00000488391 COL4A1P02462 1669 aa14.14□□□□□ -0.15
LCN2-206ENST00000488391 UBE2Q2LH0YL09 131 aa14.14□□□□□ -0.15
LCN2-206ENST00000488391 IRS4O14654 1257 aaPredicted RBP14.14□□□□□ -0.15
LCN2-206ENST00000488391 TMPOP42166 694 aaKnown RBP14.14□□□□□ -0.15
LCN2-206ENST00000488391 NEUROD2Q15784 382 aa14.14□□□□□ -0.15
LCN2-206ENST00000488391 PRAMEF18Q5VWM3 479 aa14.14□□□□□ -0.15
LCN2-206ENST00000488391 SEC31BQ9NQW1 1179 aa14.14□□□□□ -0.15
LCN2-206ENST00000488391 ANKIB1Q9P2G1 1089 aa14.14□□□□□ -0.15
LCN2-206ENST00000488391 DDX60Q8IY21 1712 aaKnown RBP14.14□□□□□ -0.15
LCN2-206ENST00000488391 UFL1O94874 794 aa14.13□□□□□ -0.15
LCN2-206ENST00000488391 ZNF280AP59817 542 aaPredicted RBP14.13□□□□□ -0.15
LCN2-206ENST00000488391 RSBN1LQ6PCB5 846 aaPredicted RBP14.13□□□□□ -0.15
LCN2-206ENST00000488391 ZNF296Q8WUU4 475 aaPredicted RBP14.13□□□□□ -0.15
LCN2-206ENST00000488391 CHL1O00533 1208 aa14.12□□□□□ -0.15
LCN2-206ENST00000488391 FKBP1BP68106 108 aa14.12□□□□□ -0.15
LCN2-206ENST00000488391 PKN2Q16513 984 aaKnown RBP14.12□□□□□ -0.15
LCN2-206ENST00000488391 HDGFL1Q5TGJ6 251 aa14.12□□□□□ -0.15
LCN2-206ENST00000488391 AGBL3Q8NEM8 1001 aa14.12□□□□□ -0.15
LCN2-206ENST00000488391 PODXL2Q9NZ53 605 aa14.12□□□□□ -0.15
LCN2-206ENST00000488391 GGA1Q9UJY5 639 aa14.12□□□□□ -0.15
LCN2-206ENST00000488391 USP17L8P0C7I0 530 aa14.11□□□□□ -0.15
LCN2-206ENST00000488391 LMOD3Q0VAK6 560 aa14.11□□□□□ -0.15
LCN2-206ENST00000488391 MKRN3Q13064 507 aaKnown RBP14.11□□□□□ -0.15
LCN2-206ENST00000488391 GMLQ99445 158 aa14.11□□□□□ -0.15
LCN2-206ENST00000488391 MYOZ2Q9NPC6 264 aa14.11□□□□□ -0.15
LCN2-206ENST00000488391 DBF4Q9UBU7 674 aaPredicted RBP14.11□□□□□ -0.15
LCN2-206ENST00000488391 TTLL12Q14166 644 aaPredicted RBP14.1□□□□□ -0.15
LCN2-206ENST00000488391 NCBP3Q53F19 620 aaKnown RBP14.1□□□□□ -0.15
LCN2-206ENST00000488391 JARID2Q92833 1246 aaPredicted RBP14.1□□□□□ -0.15
LCN2-206ENST00000488391 CCDC85AQ96PX6 553 aaPredicted RBP14.1□□□□□ -0.15
LCN2-206ENST00000488391 GPR25O00155 361 aa14.09□□□□□ -0.15
LCN2-206ENST00000488391 TRIM28Q13263 835 aaKnown RBP14.09□□□□□ -0.15
LCN2-206ENST00000488391 NBPF9Q3BBW0 867 aa14.09□□□□□ -0.15
LCN2-206ENST00000488391 CCDC146Q8IYE0 955 aa14.09□□□□□ -0.15
LCN2-206ENST00000488391 USP17L3A6NCW0 530 aa14.08□□□□□ -0.16
LCN2-206ENST00000488391 USP17L4A6NCW7 530 aa14.08□□□□□ -0.16
LCN2-206ENST00000488391 WTIPA6NIX2 430 aaPredicted RBP14.08□□□□□ -0.16
LCN2-206ENST00000488391 TM4SF4P48230 202 aa14.08□□□□□ -0.16
LCN2-206ENST00000488391 FBXO46Q6PJ61 603 aaPredicted RBP14.08□□□□□ -0.16
LCN2-206ENST00000488391 USP17L1Q7RTZ2 530 aa14.08□□□□□ -0.16
LCN2-206ENST00000488391 RIC3Q7Z5B4 369 aa14.08□□□□□ -0.16
LCN2-206ENST00000488391 ZBTB38Q8NAP3 1195 aaPredicted RBP14.08□□□□□ -0.16
LCN2-206ENST00000488391 RUNDC1Q96C34 613 aa14.08□□□□□ -0.16
LCN2-206ENST00000488391 R3HDMLQ9H3Y0 253 aa14.08□□□□□ -0.16
LCN2-206ENST00000488391 HYPKQ9NX55 129 aa14.08□□□□□ -0.16
LCN2-206ENST00000488391 PITPNM2Q9BZ72 1349 aa14.08□□□□□ -0.16
LCN2-206ENST00000488391 PAPPA2Q9BXP8 1791 aa14.07□□□□□ -0.16
LCN2-206ENST00000488391 PRKG1Q13976 671 aa14.07□□□□□ -0.16
LCN2-206ENST00000488391 MXD3Q9BW11 206 aa14.07□□□□□ -0.16
LCN2-206ENST00000488391 FKTNO75072 461 aa14.06□□□□□ -0.16
LCN2-206ENST00000488391 CCDC152Q4G0S7 254 aa14.06□□□□□ -0.16
LCN2-206ENST00000488391 DUSP27Q5VZP5 1158 aa14.06□□□□□ -0.16
LCN2-206ENST00000488391 PODNQ7Z5L7 613 aa14.06□□□□□ -0.16
LCN2-206ENST00000488391 FBXW7Q969H0 707 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms