RNA–Protein interactions for RNA: ENST00000488253.5

PLSCR1-215, Transcript of phospholipid scramblase 1, humanhuman

TSL 3

Gene PLSCR1, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLSCR1-215ENST00000488253 TMEM88BA6NKF7 163 aa16.94■□□□□ 0.3
PLSCR1-215ENST00000488253 UFL1O94874 794 aa16.94■□□□□ 0.3
PLSCR1-215ENST00000488253 GMPSP49915 693 aaPredicted RBP16.94■□□□□ 0.3
PLSCR1-215ENST00000488253 UBE3BQ7Z3V4 1068 aa16.94■□□□□ 0.3
PLSCR1-215ENST00000488253 JMYQ8N9B5 988 aa16.94■□□□□ 0.3
PLSCR1-215ENST00000488253 TBC1D16Q8TBP0 767 aa16.94■□□□□ 0.3
PLSCR1-215ENST00000488253 DBNDD1Q9H9R9 158 aa16.94■□□□□ 0.3
PLSCR1-215ENST00000488253 POLLQ9UGP5 575 aa16.94■□□□□ 0.3
PLSCR1-215ENST00000488253 GGA1Q9UJY5 639 aa16.94■□□□□ 0.3
PLSCR1-215ENST00000488253 ADAMTSL1Q8N6G6 1762 aa16.94■□□□□ 0.3
PLSCR1-215ENST00000488253 MYH3P11055 1940 aa16.94■□□□□ 0.3
PLSCR1-215ENST00000488253 PASKQ96RG2 1323 aa16.94■□□□□ 0.3
PLSCR1-215ENST00000488253 MKRN1Q9UHC7 482 aaKnown RBP16.93■□□□□ 0.3
PLSCR1-215ENST00000488253 LTBP1Q14766 1721 aa16.93■□□□□ 0.3
PLSCR1-215ENST00000488253 H7C1D1 291 aa16.92■□□□□ 0.3
PLSCR1-215ENST00000488253 ECE2O60344 883 aa16.92■□□□□ 0.3
PLSCR1-215ENST00000488253 ITGBL1O95965 494 aaPredicted RBP16.92■□□□□ 0.3
PLSCR1-215ENST00000488253 GCKRQ14397 625 aa16.92■□□□□ 0.3
PLSCR1-215ENST00000488253 LINS1Q8NG48 757 aa16.92■□□□□ 0.3
PLSCR1-215ENST00000488253 PODXL2Q9NZ53 605 aa16.92■□□□□ 0.3
PLSCR1-215ENST00000488253 YDJCA8MPS7 323 aa16.91■□□□□ 0.3
PLSCR1-215ENST00000488253 H7C1W4 665 aa16.91■□□□□ 0.3
PLSCR1-215ENST00000488253 IGHMBP2P38935 993 aaKnown RBP16.91■□□□□ 0.3
PLSCR1-215ENST00000488253 DOK7Q18PE1 504 aa16.91■□□□□ 0.3
PLSCR1-215ENST00000488253 TTLL11Q8NHH1 800 aa16.91■□□□□ 0.3
PLSCR1-215ENST00000488253 XDHP47989 1333 aa16.91■□□□□ 0.3
PLSCR1-215ENST00000488253 COL4A1P02462 1669 aa16.91■□□□□ 0.3
PLSCR1-215ENST00000488253 ATP2B4P23634 1241 aa16.9■□□□□ 0.3
PLSCR1-215ENST00000488253 GPR101Q96P66 508 aaPredicted RBP16.9■□□□□ 0.3
PLSCR1-215ENST00000488253 GREM2Q9H772 168 aa16.9■□□□□ 0.3
PLSCR1-215ENST00000488253 CNOT7Q9UIV1 285 aaKnown RBP16.9■□□□□ 0.3
PLSCR1-215ENST00000488253 ABT1Q9ULW3 272 aaKnown RBP16.9■□□□□ 0.3
PLSCR1-215ENST00000488253 PSMD14O00487 310 aa16.89■□□□□ 0.29
PLSCR1-215ENST00000488253 SPEF2Q9C093 1822 aa16.89■□□□□ 0.29
PLSCR1-215ENST00000488253 RTL9Q8NET4 1388 aa16.89■□□□□ 0.29
PLSCR1-215ENST00000488253 RPS12P25398 132 aaKnown RBP16.88■□□□□ 0.29
PLSCR1-215ENST00000488253 MICALL2Q8IY33 904 aa16.88■□□□□ 0.29
PLSCR1-215ENST00000488253 DPF2Q92785 391 aa16.88■□□□□ 0.29
PLSCR1-215ENST00000488253 MPHOSPH8Q99549 860 aa16.88■□□□□ 0.29
PLSCR1-215ENST00000488253 BSDC1Q9NW68 430 aaPredicted RBP16.88■□□□□ 0.29
PLSCR1-215ENST00000488253 ZBTB12Q9Y330 459 aaPredicted RBP16.88■□□□□ 0.29
PLSCR1-215ENST00000488253 CNTNAP1P78357 1384 aa16.88■□□□□ 0.29
PLSCR1-215ENST00000488253 F6X3S4 739 aa16.87■□□□□ 0.29
PLSCR1-215ENST00000488253 ITGA6P23229 1130 aa16.87■□□□□ 0.29
PLSCR1-215ENST00000488253 SLC4A10Q6U841 1118 aa16.87■□□□□ 0.29
PLSCR1-215ENST00000488253 PLA2G12BQ9BX93 195 aa16.87■□□□□ 0.29
PLSCR1-215ENST00000488253 CHMP3Q9Y3E7 222 aa16.87■□□□□ 0.29
PLSCR1-215ENST00000488253 ANKRD18BA2A2Z9 1011 aa16.86■□□□□ 0.29
PLSCR1-215ENST00000488253 E9PSI1 815 aa16.86■□□□□ 0.29
PLSCR1-215ENST00000488253 HSPA1AP0DMV8 641 aaKnown RBP16.86■□□□□ 0.29
PLSCR1-215ENST00000488253 HSPA1BP0DMV9 641 aaKnown RBP16.86■□□□□ 0.29
PLSCR1-215ENST00000488253 DEFB115Q30KQ5 88 aa16.86■□□□□ 0.29
PLSCR1-215ENST00000488253 PAXIP1Q6ZW49 1069 aaPredicted RBP16.86■□□□□ 0.29
PLSCR1-215ENST00000488253 ZC3H15Q8WU90 426 aaKnown RBP16.86■□□□□ 0.29
PLSCR1-215ENST00000488253 MINPP1Q9UNW1 487 aa16.86■□□□□ 0.29
PLSCR1-215ENST00000488253 KCNJ4P48050 445 aa16.85■□□□□ 0.29
PLSCR1-215ENST00000488253 FAM161AQ3B820 660 aa16.85■□□□□ 0.29
PLSCR1-215ENST00000488253 ANKRD2Q9GZV1 360 aa16.85■□□□□ 0.29
PLSCR1-215ENST00000488253 C9orf78Q9NZ63 289 aaPredicted RBP16.85■□□□□ 0.29
PLSCR1-215ENST00000488253 ZNF521Q96K83 1311 aa16.85■□□□□ 0.29
PLSCR1-215ENST00000488253 CCT4P50991 539 aaKnown RBP16.84■□□□□ 0.29
PLSCR1-215ENST00000488253 IFIT5Q13325 482 aaKnown RBP16.84■□□□□ 0.29
PLSCR1-215ENST00000488253 TAF7LQ5H9L4 462 aa16.84■□□□□ 0.29
PLSCR1-215ENST00000488253 BEND3Q5T5X7 828 aa16.84■□□□□ 0.29
PLSCR1-215ENST00000488253 RBM26Q5T8P6 1007 aaKnown RBP16.84■□□□□ 0.29
PLSCR1-215ENST00000488253 CDC37L1Q7L3B6 337 aa16.84■□□□□ 0.29
PLSCR1-215ENST00000488253 TRPM4Q8TD43 1214 aa16.84■□□□□ 0.29
PLSCR1-215ENST00000488253 SRCIN1Q9C0H9 1055 aa16.84■□□□□ 0.29
PLSCR1-215ENST00000488253 TRPM7Q96QT4 1865 aa16.84■□□□□ 0.29
PLSCR1-215ENST00000488253 TRAF5O00463 557 aa16.83■□□□□ 0.28
PLSCR1-215ENST00000488253 CSF1RP07333 972 aa16.83■□□□□ 0.28
PLSCR1-215ENST00000488253 CASP7P55210 303 aa16.83■□□□□ 0.28
PLSCR1-215ENST00000488253 TBC1D10BQ4KMP7 808 aaPredicted RBP16.83■□□□□ 0.28
PLSCR1-215ENST00000488253 SAMD7Q7Z3H4 446 aa16.83■□□□□ 0.28
PLSCR1-215ENST00000488253 PODNQ7Z5L7 613 aa16.83■□□□□ 0.28
PLSCR1-215ENST00000488253 FBXW7Q969H0 707 aa16.83■□□□□ 0.28
PLSCR1-215ENST00000488253 AIDAQ96BJ3 306 aa16.83■□□□□ 0.28
PLSCR1-215ENST00000488253 ZNF408Q9H9D4 720 aa16.83■□□□□ 0.28
PLSCR1-215ENST00000488253 KCNQ5Q9NR82 932 aa16.83■□□□□ 0.28
PLSCR1-215ENST00000488253 MED23Q9ULK4 1368 aa16.83■□□□□ 0.28
PLSCR1-215ENST00000488253 LEMD3Q9Y2U8 911 aa16.83■□□□□ 0.28
PLSCR1-215ENST00000488253 SHTN1A0MZ66 631 aa16.82■□□□□ 0.28
PLSCR1-215ENST00000488253 RASSF10A6NK89 507 aa16.82■□□□□ 0.28
PLSCR1-215ENST00000488253 CCER2I3L3R5 266 aa16.82■□□□□ 0.28
PLSCR1-215ENST00000488253 GRM8O00222 908 aa16.82■□□□□ 0.28
PLSCR1-215ENST00000488253 ALDH1L1O75891 902 aa16.82■□□□□ 0.28
PLSCR1-215ENST00000488253 VIL1P09327 827 aaKnown RBP16.82■□□□□ 0.28
PLSCR1-215ENST00000488253 VEGFBP49765 207 aa16.82■□□□□ 0.28
PLSCR1-215ENST00000488253 DCPSQ96C86 337 aaKnown RBP16.82■□□□□ 0.28
PLSCR1-215ENST00000488253 GLIS2Q9BZE0 524 aaPredicted RBP16.82■□□□□ 0.28
PLSCR1-215ENST00000488253 PGAP2Q9UHJ9 254 aa16.82■□□□□ 0.28
PLSCR1-215ENST00000488253 USP17L3A6NCW0 530 aa16.81■□□□□ 0.28
PLSCR1-215ENST00000488253 USP17L4A6NCW7 530 aa16.81■□□□□ 0.28
PLSCR1-215ENST00000488253 CELF2O95319 508 aaKnown RBP16.81■□□□□ 0.28
PLSCR1-215ENST00000488253 ECE1P42892 770 aa16.81■□□□□ 0.28
PLSCR1-215ENST00000488253 HIRAP54198 1017 aaPredicted RBP16.81■□□□□ 0.28
PLSCR1-215ENST00000488253 GRM1Q13255 1194 aa16.81■□□□□ 0.28
PLSCR1-215ENST00000488253 CCDC57Q2TAC2 916 aa16.81■□□□□ 0.28
PLSCR1-215ENST00000488253 KIF4BQ2VIQ3 1234 aa16.81■□□□□ 0.28
PLSCR1-215ENST00000488253 IFFO2Q5TF58 517 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms