RNA–Protein interactions for RNA: ENST00000488117.5

C9orf72-205, Transcript of chromosome 9 open reading frame 72, humanhuman

TSL 2

Gene C9orf72, Length 4,808 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-205ENST00000488117 NECTIN1Q15223 517 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 SF3A1Q15459 793 aaKnown RBP3.12□□□□□ -1.91
C9orf72-205ENST00000488117 NFXL1Q6ZNB6 911 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 Q6ZUG5 572 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 TMEM87AQ8NBN3 555 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 PANK2Q9BZ23 570 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 TNMDQ9H2S6 317 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 GNL3LQ9NVN8 582 aaKnown RBP3.12□□□□□ -1.91
C9orf72-205ENST00000488117 SCN11AQ9UI33 1791 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 PALLDQ8WX93 1383 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 A0A1B0GUL7 405 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 ERICH2A1L162 156 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 NRDCO43847 1150 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 PKP1Q13835 747 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 MAP3K11Q16584 847 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 ATP2B3Q16720 1220 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 TTLL7Q6ZT98 887 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 DHX32Q7L7V1 743 aaKnown RBP3.12□□□□□ -1.91
C9orf72-205ENST00000488117 NECAB1Q8N987 351 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 ZBTB38Q8NAP3 1195 aaPredicted RBP3.12□□□□□ -1.91
C9orf72-205ENST00000488117 GPT2Q8TD30 523 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 KCNB2Q92953 911 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 MPHOSPH8Q99549 860 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 LARP6Q9BRS8 491 aaKnown RBP3.12□□□□□ -1.91
C9orf72-205ENST00000488117 NACAP1Q9BZK3 213 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 DDX19AQ9NUU7 478 aaKnown RBP3.12□□□□□ -1.91
C9orf72-205ENST00000488117 DBNLQ9UJU6 430 aaKnown RBP3.12□□□□□ -1.91
C9orf72-205ENST00000488117 ADAMTS7Q9UKP4 1686 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 MAP3K15Q6ZN16 1313 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 AK9Q5TCS8 1911 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 ABCC12Q96J65 1359 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 GOLGA6L19H0YKK7 550 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 ZNF213O14771 459 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 PDE8AO60658 829 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 TAF5LO75529 589 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 CPA1P15085 419 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 CLCN1P35523 988 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 SART3Q15020 963 aaKnown RBP3.12□□□□□ -1.91
C9orf72-205ENST00000488117 EPHA10Q5JZY3 1008 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 ATL3Q6DD88 541 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 LDHAL6AQ6ZMR3 332 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 RASEFQ8IZ41 740 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 RNF214Q8ND24 703 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 NCOA7Q8NI08 942 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 SMARCC1Q92922 1105 aaPredicted RBP3.12□□□□□ -1.91
C9orf72-205ENST00000488117 AK7Q96M32 723 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 CDHR2Q9BYE9 1310 aa3.11□□□□□ -1.91
C9orf72-205ENST00000488117 C5P01031 1676 aa3.11□□□□□ -1.91
C9orf72-205ENST00000488117 SIPA1L3O60292 1781 aaPredicted RBP3.11□□□□□ -1.91
C9orf72-205ENST00000488117 CTAGE5O15320 804 aa3.11□□□□□ -1.91
C9orf72-205ENST00000488117 TPM2P07951 284 aa3.11□□□□□ -1.91
C9orf72-205ENST00000488117 GTF2E1P29083 439 aaPredicted RBP3.11□□□□□ -1.91
C9orf72-205ENST00000488117 PRIM1P49642 420 aaKnown RBP3.11□□□□□ -1.91
C9orf72-205ENST00000488117 FOXO4P98177 505 aa3.11□□□□□ -1.91
C9orf72-205ENST00000488117 ME3Q16798 604 aa3.11□□□□□ -1.91
C9orf72-205ENST00000488117 TSGA10IPQ3SY00 556 aa3.11□□□□□ -1.91
C9orf72-205ENST00000488117 DZIP3Q86Y13 1208 aaKnown RBP3.11□□□□□ -1.91
C9orf72-205ENST00000488117 XAGE2Q96GT9 111 aa3.11□□□□□ -1.91
C9orf72-205ENST00000488117 PPP1R9BQ96SB3 815 aa3.11□□□□□ -1.91
C9orf72-205ENST00000488117 NAT10Q9H0A0 1025 aaKnown RBP3.11□□□□□ -1.91
C9orf72-205ENST00000488117 SNRKQ9NRH2 765 aa3.11□□□□□ -1.91
C9orf72-205ENST00000488117 MROH5Q6ZUA9 1318 aa3.11□□□□□ -1.91
C9orf72-205ENST00000488117 ZNF335Q9H4Z2 1342 aaPredicted RBP3.11□□□□□ -1.91
C9orf72-205ENST00000488117 MED23Q9ULK4 1368 aa3.11□□□□□ -1.91
C9orf72-205ENST00000488117 AFDNP55196 1824 aaKnown RBP3.11□□□□□ -1.91
C9orf72-205ENST00000488117 IRS4O14654 1257 aaPredicted RBP3.11□□□□□ -1.91
C9orf72-205ENST00000488117 GPTP24298 496 aa3.11□□□□□ -1.91
C9orf72-205ENST00000488117 RFX5P48382 616 aaPredicted RBP3.11□□□□□ -1.91
C9orf72-205ENST00000488117 MAP3K12Q12852 859 aa3.11□□□□□ -1.91
C9orf72-205ENST00000488117 CCDC152Q4G0S7 254 aa3.11□□□□□ -1.91
C9orf72-205ENST00000488117 GLIPR1L2Q4G1C9 344 aa3.11□□□□□ -1.91
C9orf72-205ENST00000488117 PARP10Q53GL7 1025 aa3.11□□□□□ -1.91
C9orf72-205ENST00000488117 ZMYM1Q5SVZ6 1142 aa3.11□□□□□ -1.91
C9orf72-205ENST00000488117 DNAJC10Q8IXB1 793 aa3.11□□□□□ -1.91
C9orf72-205ENST00000488117 WASF1Q92558 559 aa3.11□□□□□ -1.91
C9orf72-205ENST00000488117 BRF1Q92994 677 aa3.11□□□□□ -1.91
C9orf72-205ENST00000488117 GTF3C6Q969F1 213 aa3.11□□□□□ -1.91
C9orf72-205ENST00000488117 AIDAQ96BJ3 306 aa3.11□□□□□ -1.91
C9orf72-205ENST00000488117 CCDC34Q96HJ3 373 aa3.11□□□□□ -1.91
C9orf72-205ENST00000488117 UTP14AQ9BVJ6 771 aaKnown RBP3.11□□□□□ -1.91
C9orf72-205ENST00000488117 GDPD2Q9HCC8 539 aa3.11□□□□□ -1.91
C9orf72-205ENST00000488117 TPCN1Q9ULQ1 816 aa3.11□□□□□ -1.91
C9orf72-205ENST00000488117 ZDHHC9Q9Y397 364 aa3.11□□□□□ -1.91
C9orf72-205ENST00000488117 RPAP1Q9BWH6 1393 aaPredicted RBP3.11□□□□□ -1.91
C9orf72-205ENST00000488117 ZNF609O15014 1411 aa3.11□□□□□ -1.91
C9orf72-205ENST00000488117 CCDC69A6NI79 296 aa3.11□□□□□ -1.91
C9orf72-205ENST00000488117 KINO60870 393 aaKnown RBP3.11□□□□□ -1.91
C9orf72-205ENST00000488117 CAVIN2O95810 425 aa3.11□□□□□ -1.91
C9orf72-205ENST00000488117 ITGA6P23229 1130 aa3.11□□□□□ -1.91
C9orf72-205ENST00000488117 FOSBP53539 338 aa3.11□□□□□ -1.91
C9orf72-205ENST00000488117 CTSWP56202 376 aa3.11□□□□□ -1.91
C9orf72-205ENST00000488117 DNM1Q05193 864 aaKnown RBP3.11□□□□□ -1.91
C9orf72-205ENST00000488117 DDB1Q16531 1140 aa3.11□□□□□ -1.91
C9orf72-205ENST00000488117 ADCK5Q3MIX3 580 aa3.11□□□□□ -1.91
C9orf72-205ENST00000488117 CCDC129Q6ZRS4 1044 aa3.11□□□□□ -1.91
C9orf72-205ENST00000488117 VPS37DQ86XT2 251 aa3.11□□□□□ -1.91
C9orf72-205ENST00000488117 APPBP2Q92624 585 aa3.11□□□□□ -1.91
C9orf72-205ENST00000488117 DDX11Q96FC9 970 aa3.11□□□□□ -1.91
C9orf72-205ENST00000488117 CCDC85AQ96PX6 553 aaPredicted RBP3.11□□□□□ -1.91
C9orf72-205ENST00000488117 ISCA1Q9BUE6 129 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms