RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 OR13H1Q8NG92 308 aa8.34□□□□□ -1.07
CCDC66-221ENST00000487739 GDF6Q6KF10 455 aaPredicted RBP8.33□□□□□ -1.08
CCDC66-221ENST00000487739 Q8N3U1 123 aa8.33□□□□□ -1.08
CCDC66-221ENST00000487739 ZBTB39O15060 712 aa8.32□□□□□ -1.08
CCDC66-221ENST00000487739 H2AFB1P0C5Y9 115 aa8.32□□□□□ -1.08
CCDC66-221ENST00000487739 H2AFB2P0C5Z0 115 aa8.32□□□□□ -1.08
CCDC66-221ENST00000487739 XP32Q5T750 250 aa8.32□□□□□ -1.08
CCDC66-221ENST00000487739 TTC39BQ5VTQ0 682 aaPredicted RBP8.32□□□□□ -1.08
CCDC66-221ENST00000487739 IGF2-ASQ6U949 168 aa8.32□□□□□ -1.08
CCDC66-221ENST00000487739 CACTIN-AS1Q8N1I8 211 aa8.32□□□□□ -1.08
CCDC66-221ENST00000487739 CCDC82Q8N4S0 544 aa8.32□□□□□ -1.08
CCDC66-221ENST00000487739 SRA1Q9HD15 236 aaKnown RBP8.32□□□□□ -1.08
CCDC66-221ENST00000487739 SEPT3Q9UH03 358 aa8.32□□□□□ -1.08
CCDC66-221ENST00000487739 DEAF1O75398 565 aaPredicted RBP8.31□□□□□ -1.08
CCDC66-221ENST00000487739 HYAL2Q12891 473 aa8.31□□□□□ -1.08
CCDC66-221ENST00000487739 ZMYM1Q5SVZ6 1142 aa8.31□□□□□ -1.08
CCDC66-221ENST00000487739 IL22RA1Q8N6P7 574 aa8.31□□□□□ -1.08
CCDC66-221ENST00000487739 DCAF11Q8TEB1 546 aa8.31□□□□□ -1.08
CCDC66-221ENST00000487739 TP53INP1Q96A56 240 aa8.31□□□□□ -1.08
CCDC66-221ENST00000487739 SPACA7Q96KW9 195 aa8.31□□□□□ -1.08
CCDC66-221ENST00000487739 PPP1R15AO75807 674 aaPredicted RBP8.3□□□□□ -1.08
CCDC66-221ENST00000487739 SCNN1AP37088 669 aa8.3□□□□□ -1.08
CCDC66-221ENST00000487739 MAP4K3Q8IVH8 894 aa8.3□□□□□ -1.08
CCDC66-221ENST00000487739 HELQQ8TDG4 1101 aa8.3□□□□□ -1.08
CCDC66-221ENST00000487739 WFDC12Q8WWY7 111 aa8.3□□□□□ -1.08
CCDC66-221ENST00000487739 ABI2Q9NYB9 513 aaPredicted RBP8.3□□□□□ -1.08
CCDC66-221ENST00000487739 DLL1O00548 723 aa8.29□□□□□ -1.08
CCDC66-221ENST00000487739 PDE12Q6L8Q7 609 aaKnown RBP8.29□□□□□ -1.08
CCDC66-221ENST00000487739 NUDT16Q96DE0 195 aaKnown RBP8.29□□□□□ -1.08
CCDC66-221ENST00000487739 SSBP4Q9BWG4 385 aaPredicted RBP8.29□□□□□ -1.08
CCDC66-221ENST00000487739 MUC3BQ9H195 1237 aa8.29□□□□□ -1.08
CCDC66-221ENST00000487739 TRIM33Q9UPN9 1127 aa8.29□□□□□ -1.08
CCDC66-221ENST00000487739 RPLP1P05386 114 aaKnown RBP8.28□□□□□ -1.08
CCDC66-221ENST00000487739 IREB2P48200 963 aaKnown RBP8.28□□□□□ -1.08
CCDC66-221ENST00000487739 PRSS36Q5K4E3 855 aa8.28□□□□□ -1.08
CCDC66-221ENST00000487739 COL13A1Q5TAT6 717 aaPredicted RBP8.28□□□□□ -1.08
CCDC66-221ENST00000487739 SMNDC1O75940 238 aaKnown RBP eCLIP8.27□□□□□ -1.09
CCDC66-221ENST00000487739 KIF4AO95239 1232 aa8.27□□□□□ -1.09
CCDC66-221ENST00000487739 PCSK2P16519 638 aa8.27□□□□□ -1.09
CCDC66-221ENST00000487739 NOS3P29474 1203 aa8.27□□□□□ -1.09
CCDC66-221ENST00000487739 ATP11AP98196 1134 aa8.27□□□□□ -1.09
CCDC66-221ENST00000487739 ZNF438Q7Z4V0 828 aa8.27□□□□□ -1.09
CCDC66-221ENST00000487739 ATCAYQ86WG3 371 aa8.27□□□□□ -1.09
CCDC66-221ENST00000487739 MRPL18Q9H0U6 180 aaKnown RBP8.27□□□□□ -1.09
CCDC66-221ENST00000487739 PPME1Q9Y570 386 aa8.27□□□□□ -1.09
CCDC66-221ENST00000487739 TMEM88BA6NKF7 163 aa8.26□□□□□ -1.09
CCDC66-221ENST00000487739 CEP135Q66GS9 1140 aa8.26□□□□□ -1.09
CCDC66-221ENST00000487739 ELP3Q9H9T3 547 aa8.26□□□□□ -1.09
CCDC66-221ENST00000487739 SSFA2P28290 1259 aa8.25□□□□□ -1.09
CCDC66-221ENST00000487739 SETDB1Q15047 1291 aa8.25□□□□□ -1.09
CCDC66-221ENST00000487739 NOM1Q5C9Z4 860 aaKnown RBP8.25□□□□□ -1.09
CCDC66-221ENST00000487739 NCAPG2Q86XI2 1143 aa8.25□□□□□ -1.09
CCDC66-221ENST00000487739 TTC16Q8NEE8 873 aa8.25□□□□□ -1.09
CCDC66-221ENST00000487739 EDEM1Q92611 657 aa8.25□□□□□ -1.09
CCDC66-221ENST00000487739 AKTIPQ9H8T0 292 aa8.25□□□□□ -1.09
CCDC66-221ENST00000487739 TMEM63CQ9P1W3 806 aa8.25□□□□□ -1.09
CCDC66-221ENST00000487739 SCO2A0A1W2PP80 73 aa8.24□□□□□ -1.09
CCDC66-221ENST00000487739 CYP2E1P05181 493 aaPredicted RBP8.24□□□□□ -1.09
CCDC66-221ENST00000487739 DNM1Q05193 864 aaKnown RBP8.24□□□□□ -1.09
CCDC66-221ENST00000487739 GTF3C2Q8WUA4 911 aaPredicted RBP8.24□□□□□ -1.09
CCDC66-221ENST00000487739 MEGF10Q96KG7 1140 aa8.24□□□□□ -1.09
CCDC66-221ENST00000487739 LACRTQ9GZZ8 138 aa8.24□□□□□ -1.09
CCDC66-221ENST00000487739 RASSF4Q9H2L5 321 aa8.24□□□□□ -1.09
CCDC66-221ENST00000487739 MPSTP25325 297 aa8.23□□□□□ -1.09
CCDC66-221ENST00000487739 CDC27P30260 824 aa8.23□□□□□ -1.09
CCDC66-221ENST00000487739 FOXD4L6Q3SYB3 417 aaPredicted RBP8.23□□□□□ -1.09
CCDC66-221ENST00000487739 FOXD4L3Q6VB84 417 aaPredicted RBP8.23□□□□□ -1.09
CCDC66-221ENST00000487739 TMEM130Q8N3G9 435 aa8.23□□□□□ -1.09
CCDC66-221ENST00000487739 PBX4Q9BYU1 374 aa8.23□□□□□ -1.09
CCDC66-221ENST00000487739 C1orf115Q9H7X2 142 aa8.23□□□□□ -1.09
CCDC66-221ENST00000487739 MTMR7Q9Y216 660 aa8.23□□□□□ -1.09
CCDC66-221ENST00000487739 FAM177BA6PVY3 158 aa8.22□□□□□ -1.09
CCDC66-221ENST00000487739 F8W735 103 aaPredicted RBP8.22□□□□□ -1.09
CCDC66-221ENST00000487739 LINC01387J3KSC0 135 aa8.22□□□□□ -1.09
CCDC66-221ENST00000487739 PDGFAP04085 211 aa8.22□□□□□ -1.09
CCDC66-221ENST00000487739 MZF1P28698 734 aaPredicted RBP8.22□□□□□ -1.09
CCDC66-221ENST00000487739 EIF1AXP47813 144 aaKnown RBP8.22□□□□□ -1.09
CCDC66-221ENST00000487739 ALKBH2Q6NS38 261 aa8.22□□□□□ -1.09
CCDC66-221ENST00000487739 XKR5Q6UX68 686 aa8.22□□□□□ -1.09
CCDC66-221ENST00000487739 C14orf37Q86TY3 774 aa8.22□□□□□ -1.09
CCDC66-221ENST00000487739 CEP120Q8N960 986 aa8.22□□□□□ -1.09
CCDC66-221ENST00000487739 KANSL3Q9P2N6 904 aa8.22□□□□□ -1.09
CCDC66-221ENST00000487739 PTPRAP18433 802 aa8.21□□□□□ -1.1
CCDC66-221ENST00000487739 C8orf34Q49A92 452 aa8.21□□□□□ -1.1
CCDC66-221ENST00000487739 FAM117BQ6P1L5 589 aa8.21□□□□□ -1.1
CCDC66-221ENST00000487739 ALX3O95076 343 aa8.2□□□□□ -1.1
CCDC66-221ENST00000487739 CES1P23141 567 aa8.2□□□□□ -1.1
CCDC66-221ENST00000487739 TXNDC11Q6PKC3 985 aa8.2□□□□□ -1.1
CCDC66-221ENST00000487739 DZIP1LQ8IYY4 767 aaKnown RBP8.2□□□□□ -1.1
CCDC66-221ENST00000487739 CNTN3Q9P232 1028 aa8.2□□□□□ -1.1
CCDC66-221ENST00000487739 CD68P34810 354 aaPredicted RBP8.19□□□□□ -1.1
CCDC66-221ENST00000487739 MTMR3Q13615 1198 aa8.19□□□□□ -1.1
CCDC66-221ENST00000487739 PRR23CQ6ZRP0 262 aa8.19□□□□□ -1.1
CCDC66-221ENST00000487739 Q6ZS46 218 aa8.19□□□□□ -1.1
CCDC66-221ENST00000487739 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.19□□□□□ -1.1
CCDC66-221ENST00000487739 C1orf127Q8N9H9 656 aa8.19□□□□□ -1.1
CCDC66-221ENST00000487739 GALNT11Q8NCW6 608 aa8.19□□□□□ -1.1
CCDC66-221ENST00000487739 PMEPA1Q969W9 287 aa8.19□□□□□ -1.1
CCDC66-221ENST00000487739 GGNBP2Q9H3C7 697 aa8.19□□□□□ -1.1
CCDC66-221ENST00000487739 SALL4Q9UJQ4 1053 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms