RNA–Protein interactions for RNA: ENST00000487721.1

SFXN3-206, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-206ENST00000487721 NIM1KQ8IY84 436 aa15.38■□□□□ 0.05
SFXN3-206ENST00000487721 ARHGAP45Q92619 1136 aa15.38■□□□□ 0.05
SFXN3-206ENST00000487721 EYA3Q99504 573 aa15.38■□□□□ 0.05
SFXN3-206ENST00000487721 GREM2Q9H772 168 aa15.38■□□□□ 0.05
SFXN3-206ENST00000487721 CHMP3Q9Y3E7 222 aa15.38■□□□□ 0.05
SFXN3-206ENST00000487721 RTL9Q8NET4 1388 aa15.37■□□□□ 0.05
SFXN3-206ENST00000487721 ANKRD18BA2A2Z9 1011 aa15.37■□□□□ 0.05
SFXN3-206ENST00000487721 C6orf229H3BNL8 230 aa15.37■□□□□ 0.05
SFXN3-206ENST00000487721 CSF1RP07333 972 aa15.37■□□□□ 0.05
SFXN3-206ENST00000487721 ITGA6P23229 1130 aa15.37■□□□□ 0.05
SFXN3-206ENST00000487721 IFIT5Q13325 482 aaKnown RBP15.37■□□□□ 0.05
SFXN3-206ENST00000487721 CNTROBQ8N137 903 aa15.37■□□□□ 0.05
SFXN3-206ENST00000487721 GPC2Q8N158 579 aa15.37■□□□□ 0.05
SFXN3-206ENST00000487721 MPHOSPH8Q99549 860 aa15.37■□□□□ 0.05
SFXN3-206ENST00000487721 HDAC5Q9UQL6 1122 aa15.37■□□□□ 0.05
SFXN3-206ENST00000487721 CNTNAP1P78357 1384 aa15.36■□□□□ 0.05
SFXN3-206ENST00000487721 WASHC4Q2M389 1173 aa15.36■□□□□ 0.05
SFXN3-206ENST00000487721 CCDC57Q2TAC2 916 aa15.36■□□□□ 0.05
SFXN3-206ENST00000487721 TAF7LQ5H9L4 462 aa15.36■□□□□ 0.05
SFXN3-206ENST00000487721 BSDC1Q9NW68 430 aaPredicted RBP15.36■□□□□ 0.05
SFXN3-206ENST00000487721 G3V3G9 751 aa15.35■□□□□ 0.05
SFXN3-206ENST00000487721 VEGFBP49765 207 aa15.35■□□□□ 0.05
SFXN3-206ENST00000487721 GPSM2P81274 684 aa15.35■□□□□ 0.05
SFXN3-206ENST00000487721 KIAA2012Q0VF49 1180 aa15.35■□□□□ 0.05
SFXN3-206ENST00000487721 AOC3Q16853 763 aa15.35■□□□□ 0.05
SFXN3-206ENST00000487721 FAM161AQ3B820 660 aa15.35■□□□□ 0.05
SFXN3-206ENST00000487721 DCAF8Q5TAQ9 597 aa15.35■□□□□ 0.05
SFXN3-206ENST00000487721 MAP1SQ66K74 1059 aaPredicted RBP15.35■□□□□ 0.05
SFXN3-206ENST00000487721 LMBR1LQ6UX01 489 aa15.35■□□□□ 0.05
SFXN3-206ENST00000487721 FRAT1Q92837 279 aaPredicted RBP15.35■□□□□ 0.05
SFXN3-206ENST00000487721 PODXL2Q9NZ53 605 aa15.35■□□□□ 0.05
SFXN3-206ENST00000487721 GGA1Q9UJY5 639 aa15.35■□□□□ 0.05
SFXN3-206ENST00000487721 CACNA1SQ13698 1873 aa15.34■□□□□ 0.05
SFXN3-206ENST00000487721 FOXN1O15353 648 aa15.34■□□□□ 0.05
SFXN3-206ENST00000487721 FOXO4P98177 505 aa15.34■□□□□ 0.05
SFXN3-206ENST00000487721 ZC3H12CQ9C0D7 883 aaKnown RBP15.34■□□□□ 0.05
SFXN3-206ENST00000487721 ZNRF3Q9ULT6 936 aa15.34■□□□□ 0.05
SFXN3-206ENST00000487721 GJA3Q9Y6H8 435 aa15.34■□□□□ 0.05
SFXN3-206ENST00000487721 UTYO14607 1347 aa15.34■□□□□ 0.05
SFXN3-206ENST00000487721 XDHP47989 1333 aa15.34■□□□□ 0.05
SFXN3-206ENST00000487721 SNED1Q8TER0 1413 aa15.34■□□□□ 0.05
SFXN3-206ENST00000487721 UFL1O94874 794 aa15.33■□□□□ 0.04
SFXN3-206ENST00000487721 NBPF7P0C2Y1 421 aaPredicted RBP15.33■□□□□ 0.04
SFXN3-206ENST00000487721 ATP2B4P23634 1241 aa15.33■□□□□ 0.04
SFXN3-206ENST00000487721 DEFB115Q30KQ5 88 aa15.33■□□□□ 0.04
SFXN3-206ENST00000487721 SLC51AQ86UW1 340 aa15.33■□□□□ 0.04
SFXN3-206ENST00000487721 TBC1D16Q8TBP0 767 aa15.33■□□□□ 0.04
SFXN3-206ENST00000487721 ANKRD2Q9GZV1 360 aa15.33■□□□□ 0.04
SFXN3-206ENST00000487721 SCN4AP35499 1836 aa15.32■□□□□ 0.04
SFXN3-206ENST00000487721 BCAR3O75815 825 aa15.32■□□□□ 0.04
SFXN3-206ENST00000487721 ZKSCAN2Q63HK3 967 aa15.32■□□□□ 0.04
SFXN3-206ENST00000487721 ATF7IPQ6VMQ6 1270 aa15.32■□□□□ 0.04
SFXN3-206ENST00000487721 SUCLG2Q96I99 432 aa15.32■□□□□ 0.04
SFXN3-206ENST00000487721 POLLQ9UGP5 575 aa15.32■□□□□ 0.04
SFXN3-206ENST00000487721 MINPP1Q9UNW1 487 aa15.32■□□□□ 0.04
SFXN3-206ENST00000487721 DDX60Q8IY21 1712 aaKnown RBP15.31■□□□□ 0.04
SFXN3-206ENST00000487721 RIMBP2O15034 1052 aa15.31■□□□□ 0.04
SFXN3-206ENST00000487721 UBTFL1P0CB47 393 aaPredicted RBP15.31■□□□□ 0.04
SFXN3-206ENST00000487721 LMOD1P29536 600 aaPredicted RBP15.31■□□□□ 0.04
SFXN3-206ENST00000487721 EPS15P42566 896 aa15.31■□□□□ 0.04
SFXN3-206ENST00000487721 TNIP1Q15025 636 aa15.31■□□□□ 0.04
SFXN3-206ENST00000487721 AIDAQ96BJ3 306 aa15.31■□□□□ 0.04
SFXN3-206ENST00000487721 USP44Q9H0E7 712 aa15.31■□□□□ 0.04
SFXN3-206ENST00000487721 KCNJ4P48050 445 aa15.3■□□□□ 0.04
SFXN3-206ENST00000487721 EPHA10Q5JZY3 1008 aa15.3■□□□□ 0.04
SFXN3-206ENST00000487721 LDHAL6AQ6ZMR3 332 aa15.3■□□□□ 0.04
SFXN3-206ENST00000487721 BICC1Q9H694 974 aaKnown RBP15.3■□□□□ 0.04
SFXN3-206ENST00000487721 PRDM10Q9NQV6 1147 aa15.3■□□□□ 0.04
SFXN3-206ENST00000487721 CNNM1Q9NRU3 951 aa15.3■□□□□ 0.04
SFXN3-206ENST00000487721 WBP1LQ9NX94 342 aa15.3■□□□□ 0.04
SFXN3-206ENST00000487721 LEMD3Q9Y2U8 911 aa15.3■□□□□ 0.04
SFXN3-206ENST00000487721 RASSF10A6NK89 507 aa15.29■□□□□ 0.04
SFXN3-206ENST00000487721 GNAI3P08754 354 aa15.29■□□□□ 0.04
SFXN3-206ENST00000487721 TRIM27P14373 513 aa15.29■□□□□ 0.04
SFXN3-206ENST00000487721 CTCFP49711 727 aaPredicted RBP15.29■□□□□ 0.04
SFXN3-206ENST00000487721 SCNN1DP51172 638 aa15.29■□□□□ 0.04
SFXN3-206ENST00000487721 INTS3Q68E01 1043 aaKnown RBP15.29■□□□□ 0.04
SFXN3-206ENST00000487721 CIAPIN1Q6FI81 312 aa15.29■□□□□ 0.04
SFXN3-206ENST00000487721 FTSJ3Q8IY81 847 aaKnown RBP15.29■□□□□ 0.04
SFXN3-206ENST00000487721 ABT1Q9ULW3 272 aaKnown RBP15.29■□□□□ 0.04
SFXN3-206ENST00000487721 LAMB2P55268 1798 aa15.29■□□□□ 0.04
SFXN3-206ENST00000487721 RABL6Q3YEC7 729 aaPredicted RBP15.28■□□□□ 0.04
SFXN3-206ENST00000487721 USP50Q70EL3 339 aaPredicted RBP15.28■□□□□ 0.04
SFXN3-206ENST00000487721 WDR33Q9C0J8 1336 aaKnown RBP15.27■□□□□ 0.04
SFXN3-206ENST00000487721 RAD17O75943 681 aa15.27■□□□□ 0.04
SFXN3-206ENST00000487721 MS4A1P11836 297 aa15.27■□□□□ 0.04
SFXN3-206ENST00000487721 CHRNDQ07001 517 aa15.27■□□□□ 0.04
SFXN3-206ENST00000487721 CXCL9Q07325 125 aa15.27■□□□□ 0.04
SFXN3-206ENST00000487721 DOK7Q18PE1 504 aa15.27■□□□□ 0.04
SFXN3-206ENST00000487721 KAZALD1Q96I82 304 aa15.27■□□□□ 0.04
SFXN3-206ENST00000487721 DBNDD1Q9H9R9 158 aa15.27■□□□□ 0.04
SFXN3-206ENST00000487721 COL4A5P29400 1685 aa15.26■□□□□ 0.03
SFXN3-206ENST00000487721 ZNF804BA4D1E1 1349 aa15.26■□□□□ 0.03
SFXN3-206ENST00000487721 ECE2O60344 883 aa15.26■□□□□ 0.03
SFXN3-206ENST00000487721 LBX1P52954 281 aa15.26■□□□□ 0.03
SFXN3-206ENST00000487721 MAP2K1Q02750 393 aaPredicted RBP15.26■□□□□ 0.03
SFXN3-206ENST00000487721 FMR1Q06787 632 aaKnown RBP eCLIP15.26■□□□□ 0.03
SFXN3-206ENST00000487721 CLUAP1Q96AJ1 413 aa15.26■□□□□ 0.03
SFXN3-206ENST00000487721 ZNF594Q96JF6 807 aaPredicted RBP15.26■□□□□ 0.03
SFXN3-206ENST00000487721 PODNQ7Z5L7 613 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms