RNA–Protein interactions for RNA: ENST00000487565.5

GARNL3-218, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-218ENST00000487565 RIPK4P57078 832 aa10□□□□□ -0.81
GARNL3-218ENST00000487565 ZCRB1Q8TBF4 217 aaKnown RBP10□□□□□ -0.81
GARNL3-218ENST00000487565 RTF1Q92541 710 aaKnown RBP10□□□□□ -0.81
GARNL3-218ENST00000487565 GJD4Q96KN9 370 aaPredicted RBP10□□□□□ -0.81
GARNL3-218ENST00000487565 GMPR2Q9P2T1 348 aaKnown RBP10□□□□□ -0.81
GARNL3-218ENST00000487565 FKBPLQ9UIM3 349 aa10□□□□□ -0.81
GARNL3-218ENST00000487565 GNAT3A8MTJ3 354 aa9.99□□□□□ -0.81
GARNL3-218ENST00000487565 NNTQ13423 1086 aa9.99□□□□□ -0.81
GARNL3-218ENST00000487565 DDB1Q16531 1140 aa9.99□□□□□ -0.81
GARNL3-218ENST00000487565 CCDC27Q2M243 656 aa9.99□□□□□ -0.81
GARNL3-218ENST00000487565 AKAP4Q5JQC9 854 aa9.99□□□□□ -0.81
GARNL3-218ENST00000487565 SH3BP5LQ7L8J4 393 aa9.99□□□□□ -0.81
GARNL3-218ENST00000487565 QTRT2Q9H974 415 aaKnown RBP9.99□□□□□ -0.81
GARNL3-218ENST00000487565 ATP13A2Q9NQ11 1180 aa9.99□□□□□ -0.81
GARNL3-218ENST00000487565 CAPN5O15484 640 aaPredicted RBP9.98□□□□□ -0.81
GARNL3-218ENST00000487565 ADH1CP00326 375 aa9.98□□□□□ -0.81
GARNL3-218ENST00000487565 HSP90AB1P08238 724 aaKnown RBP9.98□□□□□ -0.81
GARNL3-218ENST00000487565 PRKCSHP14314 528 aaPredicted RBP9.98□□□□□ -0.81
GARNL3-218ENST00000487565 PHKG2P15735 406 aa9.98□□□□□ -0.81
GARNL3-218ENST00000487565 CALD1Q05682 793 aaKnown RBP9.98□□□□□ -0.81
GARNL3-218ENST00000487565 SH3RF1Q7Z6J0 888 aa9.98□□□□□ -0.81
GARNL3-218ENST00000487565 IFNL2Q8IZJ0 200 aa9.98□□□□□ -0.81
GARNL3-218ENST00000487565 CDK15Q96Q40 435 aa9.98□□□□□ -0.81
GARNL3-218ENST00000487565 KDM6AO15550 1401 aaPredicted RBP9.98□□□□□ -0.81
GARNL3-218ENST00000487565 MRC1P22897 1456 aa9.98□□□□□ -0.81
GARNL3-218ENST00000487565 ADAMTS7Q9UKP4 1686 aa9.97□□□□□ -0.81
GARNL3-218ENST00000487565 EXOC5O00471 708 aa9.97□□□□□ -0.81
GARNL3-218ENST00000487565 CYP27B1O15528 508 aa9.97□□□□□ -0.81
GARNL3-218ENST00000487565 HTATSF1O43719 755 aaKnown RBP9.97□□□□□ -0.81
GARNL3-218ENST00000487565 RBM6P78332 1123 aaKnown RBP9.97□□□□□ -0.81
GARNL3-218ENST00000487565 TMEM259Q4ZIN3 620 aa9.97□□□□□ -0.81
GARNL3-218ENST00000487565 WWC1Q8IX03 1113 aa9.97□□□□□ -0.81
GARNL3-218ENST00000487565 C1QTNF2Q9BXJ5 285 aa9.97□□□□□ -0.81
GARNL3-218ENST00000487565 HMX1Q9NP08 348 aaPredicted RBP9.97□□□□□ -0.81
GARNL3-218ENST00000487565 ZNF521Q96K83 1311 aa9.97□□□□□ -0.81
GARNL3-218ENST00000487565 DLG5Q8TDM6 1919 aa9.96□□□□□ -0.81
GARNL3-218ENST00000487565 PDXDC2PQ6P474 469 aa9.96□□□□□ -0.82
GARNL3-218ENST00000487565 MCM10Q7L590 875 aa9.96□□□□□ -0.82
GARNL3-218ENST00000487565 PNMA1Q8ND90 353 aa9.96□□□□□ -0.82
GARNL3-218ENST00000487565 DDX54Q8TDD1 881 aaKnown RBP9.96□□□□□ -0.82
GARNL3-218ENST00000487565 THUMPD2Q9BTF0 503 aaKnown RBP9.96□□□□□ -0.82
GARNL3-218ENST00000487565 CEMIPQ8WUJ3 1361 aa9.96□□□□□ -0.82
GARNL3-218ENST00000487565 RGS12O14924 1447 aa9.96□□□□□ -0.82
GARNL3-218ENST00000487565 TEFQ10587 303 aa9.95□□□□□ -0.82
GARNL3-218ENST00000487565 PDE3BQ13370 1112 aa9.95□□□□□ -0.82
GARNL3-218ENST00000487565 DCTN1Q14203 1278 aa9.95□□□□□ -0.82
GARNL3-218ENST00000487565 MPRIPQ6WCQ1 1025 aa9.95□□□□□ -0.82
GARNL3-218ENST00000487565 WDR63Q8IWG1 891 aa9.95□□□□□ -0.82
GARNL3-218ENST00000487565 SEPT12Q8IYM1 358 aa9.95□□□□□ -0.82
GARNL3-218ENST00000487565 EPS8L1Q8TE68 723 aa9.95□□□□□ -0.82
GARNL3-218ENST00000487565 DCAF5Q96JK2 942 aa9.95□□□□□ -0.82
GARNL3-218ENST00000487565 ARHGAP9Q9BRR9 750 aa9.95□□□□□ -0.82
GARNL3-218ENST00000487565 IL16Q14005 1332 aa9.95□□□□□ -0.82
GARNL3-218ENST00000487565 ZC3H4Q9UPT8 1303 aaKnown RBP9.95□□□□□ -0.82
GARNL3-218ENST00000487565 DOT1LQ8TEK3 1739 aa9.94□□□□□ -0.82
GARNL3-218ENST00000487565 TOGARAM1Q9Y4F4 1720 aa9.94□□□□□ -0.82
GARNL3-218ENST00000487565 E9PSI1 815 aa9.94□□□□□ -0.82
GARNL3-218ENST00000487565 RNMTO43148 476 aaKnown RBP9.94□□□□□ -0.82
GARNL3-218ENST00000487565 RXRBP28702 533 aa9.94□□□□□ -0.82
GARNL3-218ENST00000487565 VASH1Q7L8A9 365 aaPredicted RBP9.94□□□□□ -0.82
GARNL3-218ENST00000487565 MYH16Q9H6N6 1097 aa9.94□□□□□ -0.82
GARNL3-218ENST00000487565 WDR4P57081 412 aaKnown RBP9.93□□□□□ -0.82
GARNL3-218ENST00000487565 GNAI1P63096 354 aa9.93□□□□□ -0.82
GARNL3-218ENST00000487565 NR5A1Q13285 461 aa9.93□□□□□ -0.82
GARNL3-218ENST00000487565 ERFEQ4G0M1 354 aa9.93□□□□□ -0.82
GARNL3-218ENST00000487565 TRMT44Q8IYL2 757 aaKnown RBP9.93□□□□□ -0.82
GARNL3-218ENST00000487565 IL17REQ8NFR9 667 aa9.93□□□□□ -0.82
GARNL3-218ENST00000487565 ZNF775Q96BV0 537 aaPredicted RBP9.93□□□□□ -0.82
GARNL3-218ENST00000487565 SENP2Q9HC62 589 aa9.93□□□□□ -0.82
GARNL3-218ENST00000487565 IFT57Q9NWB7 429 aa9.93□□□□□ -0.82
GARNL3-218ENST00000487565 RGS17Q9UGC6 210 aaPredicted RBP9.93□□□□□ -0.82
GARNL3-218ENST00000487565 SCN11AQ9UI33 1791 aa9.93□□□□□ -0.82
GARNL3-218ENST00000487565 FANCIQ9NVI1 1328 aa9.92□□□□□ -0.82
GARNL3-218ENST00000487565 BMP1P13497 986 aa9.92□□□□□ -0.82
GARNL3-218ENST00000487565 GRM5P41594 1212 aa9.92□□□□□ -0.82
GARNL3-218ENST00000487565 PTK2Q05397 1052 aa9.92□□□□□ -0.82
GARNL3-218ENST00000487565 POTEAQ6S8J7 498 aa9.92□□□□□ -0.82
GARNL3-218ENST00000487565 ZBTB33Q86T24 672 aa9.92□□□□□ -0.82
GARNL3-218ENST00000487565 MARCH10Q8NA82 808 aaPredicted RBP9.92□□□□□ -0.82
GARNL3-218ENST00000487565 LAS1LQ9Y4W2 734 aaKnown RBP9.92□□□□□ -0.82
GARNL3-218ENST00000487565 CENPBP07199 599 aaPredicted RBP9.91□□□□□ -0.82
GARNL3-218ENST00000487565 TIMP2P16035 220 aa9.91□□□□□ -0.82
GARNL3-218ENST00000487565 FSHRP23945 695 aa9.91□□□□□ -0.82
GARNL3-218ENST00000487565 CABP4P57796 275 aa9.91□□□□□ -0.82
GARNL3-218ENST00000487565 SLC52A2Q9HAB3 445 aa9.91□□□□□ -0.82
GARNL3-218ENST00000487565 LGR6Q9HBX8 967 aa9.91□□□□□ -0.82
GARNL3-218ENST00000487565 TMOD3Q9NYL9 352 aa9.91□□□□□ -0.82
GARNL3-218ENST00000487565 TSPYL4Q9UJ04 414 aa9.91□□□□□ -0.82
GARNL3-218ENST00000487565 MAP4K5Q9Y4K4 846 aa9.91□□□□□ -0.82
GARNL3-218ENST00000487565 SIPA1L3O60292 1781 aaPredicted RBP9.91□□□□□ -0.82
GARNL3-218ENST00000487565 BCL9O00512 1426 aa9.9□□□□□ -0.82
GARNL3-218ENST00000487565 NHSQ6T4R5 1651 aa9.9□□□□□ -0.82
GARNL3-218ENST00000487565 PAPPAQ13219 1627 aa9.9□□□□□ -0.82
GARNL3-218ENST00000487565 ERVV-2B6SEH9 535 aa9.9□□□□□ -0.82
GARNL3-218ENST00000487565 NR3C2P08235 984 aa9.9□□□□□ -0.82
GARNL3-218ENST00000487565 SLFN5Q08AF3 891 aa9.9□□□□□ -0.82
GARNL3-218ENST00000487565 TAF7Q15545 349 aaPredicted RBP9.9□□□□□ -0.82
GARNL3-218ENST00000487565 KRT27Q7Z3Y8 459 aa9.9□□□□□ -0.82
GARNL3-218ENST00000487565 TSR2Q969E8 191 aaKnown RBP9.9□□□□□ -0.82
GARNL3-218ENST00000487565 KIFC2Q96AC6 838 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms