RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 PODXL2Q9NZ53 605 aa30.17■■■□□ 2.42
PLOD3-215ENST00000487563 GGA1Q9UJY5 639 aa30.17■■■□□ 2.42
PLOD3-215ENST00000487563 H7C1D1 291 aa30.16■■■□□ 2.42
PLOD3-215ENST00000487563 CNOT7Q9UIV1 285 aaKnown RBP30.16■■■□□ 2.42
PLOD3-215ENST00000487563 PSMD14O00487 310 aa30.15■■■□□ 2.42
PLOD3-215ENST00000487563 UBE3BQ7Z3V4 1068 aa30.15■■■□□ 2.42
PLOD3-215ENST00000487563 VAMP4O75379 141 aa30.14■■■□□ 2.42
PLOD3-215ENST00000487563 MICALL2Q8IY33 904 aa30.14■■■□□ 2.42
PLOD3-215ENST00000487563 MYH16Q9H6N6 1097 aa30.14■■■□□ 2.42
PLOD3-215ENST00000487563 ZBTB12Q9Y330 459 aaPredicted RBP30.14■■■□□ 2.42
PLOD3-215ENST00000487563 PCNTO95613 3336 aa30.13■■■□□ 2.41
PLOD3-215ENST00000487563 TRAF5O00463 557 aa30.13■■■□□ 2.41
PLOD3-215ENST00000487563 VEGFBP49765 207 aa30.13■■■□□ 2.41
PLOD3-215ENST00000487563 DEFB115Q30KQ5 88 aa30.13■■■□□ 2.41
PLOD3-215ENST00000487563 DNAAF4Q8WXU2 420 aa30.13■■■□□ 2.41
PLOD3-215ENST00000487563 MYH3P11055 1940 aa30.13■■■□□ 2.41
PLOD3-215ENST00000487563 XDHP47989 1333 aa30.13■■■□□ 2.41
PLOD3-215ENST00000487563 FMR1Q06787 632 aaKnown RBP eCLIP30.12■■■□□ 2.41
PLOD3-215ENST00000487563 COL13A1Q5TAT6 717 aaPredicted RBP30.12■■■□□ 2.41
PLOD3-215ENST00000487563 TTLL11Q8NHH1 800 aa30.12■■■□□ 2.41
PLOD3-215ENST00000487563 TRPM4Q8TD43 1214 aa30.12■■■□□ 2.41
PLOD3-215ENST00000487563 CACNA1FO60840 1977 aa30.12■■■□□ 2.41
PLOD3-215ENST00000487563 RASSF10A6NK89 507 aa30.11■■■□□ 2.41
PLOD3-215ENST00000487563 DPF2Q92785 391 aa30.11■■■□□ 2.41
PLOD3-215ENST00000487563 GREM2Q9H772 168 aa30.11■■■□□ 2.41
PLOD3-215ENST00000487563 SHTN1A0MZ66 631 aa30.1■■■□□ 2.41
PLOD3-215ENST00000487563 H7C1W4 665 aa30.1■■■□□ 2.41
PLOD3-215ENST00000487563 RPS12P25398 132 aaKnown RBP30.1■■■□□ 2.41
PLOD3-215ENST00000487563 GCKRQ14397 625 aa30.1■■■□□ 2.41
PLOD3-215ENST00000487563 ZC3H15Q8WU90 426 aaKnown RBP30.1■■■□□ 2.41
PLOD3-215ENST00000487563 PAXIP1Q6ZW49 1069 aaPredicted RBP30.09■■■□□ 2.41
PLOD3-215ENST00000487563 RTL9Q8NET4 1388 aa30.09■■■□□ 2.41
PLOD3-215ENST00000487563 LINS1Q8NG48 757 aa30.09■■■□□ 2.41
PLOD3-215ENST00000487563 TRPM7Q96QT4 1865 aa30.09■■■□□ 2.41
PLOD3-215ENST00000487563 SPINK5Q9NQ38 1064 aaPredicted RBP30.09■■■□□ 2.41
PLOD3-215ENST00000487563 ATP2B4P23634 1241 aa30.08■■■□□ 2.41
PLOD3-215ENST00000487563 GLIS2Q9BZE0 524 aaPredicted RBP30.08■■■□□ 2.41
PLOD3-215ENST00000487563 KCNQ5Q9NR82 932 aa30.08■■■□□ 2.41
PLOD3-215ENST00000487563 SPEF2Q9C093 1822 aa30.08■■■□□ 2.41
PLOD3-215ENST00000487563 HIRAP54198 1017 aaPredicted RBP30.07■■■□□ 2.4
PLOD3-215ENST00000487563 AIDAQ96BJ3 306 aa30.07■■■□□ 2.4
PLOD3-215ENST00000487563 BSDC1Q9NW68 430 aaPredicted RBP30.06■■■□□ 2.4
PLOD3-215ENST00000487563 PGAP2Q9UHJ9 254 aa30.06■■■□□ 2.4
PLOD3-215ENST00000487563 IGHMBP2P38935 993 aaKnown RBP30.05■■■□□ 2.4
PLOD3-215ENST00000487563 TBC1D10BQ4KMP7 808 aaPredicted RBP30.05■■■□□ 2.4
PLOD3-215ENST00000487563 SAMD7Q7Z3H4 446 aa30.05■■■□□ 2.4
PLOD3-215ENST00000487563 WDR33Q9C0J8 1336 aaKnown RBP30.04■■■□□ 2.4
PLOD3-215ENST00000487563 CELF2O95319 508 aaKnown RBP30.04■■■□□ 2.4
PLOD3-215ENST00000487563 CST9Q5W186 159 aa30.04■■■□□ 2.4
PLOD3-215ENST00000487563 CDC37L1Q7L3B6 337 aa30.04■■■□□ 2.4
PLOD3-215ENST00000487563 PLA2G12BQ9BX93 195 aa30.04■■■□□ 2.4
PLOD3-215ENST00000487563 RBM26Q5T8P6 1007 aaKnown RBP30.03■■■□□ 2.4
PLOD3-215ENST00000487563 TNS4Q8IZW8 715 aa30.03■■■□□ 2.4
PLOD3-215ENST00000487563 ZNF408Q9H9D4 720 aa30.03■■■□□ 2.4
PLOD3-215ENST00000487563 MINPP1Q9UNW1 487 aa30.03■■■□□ 2.4
PLOD3-215ENST00000487563 SCN9AQ15858 1988 aa30.03■■■□□ 2.4
PLOD3-215ENST00000487563 F6X3S4 739 aa30.02■■■□□ 2.4
PLOD3-215ENST00000487563 VIL1P09327 827 aaKnown RBP30.02■■■□□ 2.4
PLOD3-215ENST00000487563 ECE1P42892 770 aa30.02■■■□□ 2.4
PLOD3-215ENST00000487563 GRM1Q13255 1194 aa30.02■■■□□ 2.4
PLOD3-215ENST00000487563 FAM161AQ3B820 660 aa30.02■■■□□ 2.4
PLOD3-215ENST00000487563 TLL2Q9Y6L7 1015 aa30.02■■■□□ 2.4
PLOD3-215ENST00000487563 ITGA6P23229 1130 aa30.01■■■□□ 2.39
PLOD3-215ENST00000487563 CASP7P55210 303 aa30.01■■■□□ 2.39
PLOD3-215ENST00000487563 FOXN1O15353 648 aa30■■■□□ 2.39
PLOD3-215ENST00000487563 CAPNS2Q96L46 248 aa30■■■□□ 2.39
PLOD3-215ENST00000487563 MPHOSPH8Q99549 860 aa30■■■□□ 2.39
PLOD3-215ENST00000487563 MED23Q9ULK4 1368 aa30■■■□□ 2.39
PLOD3-215ENST00000487563 CCT4P50991 539 aaKnown RBP29.99■■■□□ 2.39
PLOD3-215ENST00000487563 KIF4BQ2VIQ3 1234 aa29.99■■■□□ 2.39
PLOD3-215ENST00000487563 EGFRP00533 1210 aa29.98■■■□□ 2.39
PLOD3-215ENST00000487563 CYP4F22Q6NT55 531 aa29.98■■■□□ 2.39
PLOD3-215ENST00000487563 RSBN1LQ6PCB5 846 aaPredicted RBP29.98■■■□□ 2.39
PLOD3-215ENST00000487563 PODNQ7Z5L7 613 aa29.98■■■□□ 2.39
PLOD3-215ENST00000487563 USP48Q86UV5 1035 aa29.98■■■□□ 2.39
PLOD3-215ENST00000487563 BEND3Q5T5X7 828 aa29.97■■■□□ 2.39
PLOD3-215ENST00000487563 AGBL3Q8NEM8 1001 aa29.97■■■□□ 2.39
PLOD3-215ENST00000487563 DCPSQ96C86 337 aaKnown RBP29.97■■■□□ 2.39
PLOD3-215ENST00000487563 USP17L3A6NCW0 530 aa29.96■■■□□ 2.39
PLOD3-215ENST00000487563 USP17L4A6NCW7 530 aa29.96■■■□□ 2.39
PLOD3-215ENST00000487563 CSF1RP07333 972 aa29.96■■■□□ 2.39
PLOD3-215ENST00000487563 CTCFP49711 727 aaPredicted RBP29.96■■■□□ 2.39
PLOD3-215ENST00000487563 MAP2K1Q02750 393 aaPredicted RBP29.96■■■□□ 2.39
PLOD3-215ENST00000487563 USP17L1Q7RTZ2 530 aa29.96■■■□□ 2.39
PLOD3-215ENST00000487563 KRT26Q7Z3Y9 468 aa29.96■■■□□ 2.39
PLOD3-215ENST00000487563 ANKRD2Q9GZV1 360 aa29.96■■■□□ 2.39
PLOD3-215ENST00000487563 WBP1LQ9NX94 342 aa29.96■■■□□ 2.39
PLOD3-215ENST00000487563 CHMP3Q9Y3E7 222 aa29.96■■■□□ 2.39
PLOD3-215ENST00000487563 PSME4Q14997 1843 aa29.95■■■□□ 2.39
PLOD3-215ENST00000487563 ANKRD18BA2A2Z9 1011 aa29.95■■■□□ 2.39
PLOD3-215ENST00000487563 WTIPA6NIX2 430 aaPredicted RBP29.95■■■□□ 2.39
PLOD3-215ENST00000487563 SAPCD2Q86UD0 394 aa29.95■■■□□ 2.39
PLOD3-215ENST00000487563 LEMD3Q9Y2U8 911 aa29.95■■■□□ 2.39
PLOD3-215ENST00000487563 ZNF609O15014 1411 aa29.95■■■□□ 2.38
PLOD3-215ENST00000487563 FBXW7Q969H0 707 aa29.94■■■□□ 2.38
PLOD3-215ENST00000487563 ZNF521Q96K83 1311 aa29.94■■■□□ 2.38
PLOD3-215ENST00000487563 KCNJ4P48050 445 aa29.93■■■□□ 2.38
PLOD3-215ENST00000487563 SLC4A10Q6U841 1118 aa29.93■■■□□ 2.38
PLOD3-215ENST00000487563 IFIT5Q13325 482 aaKnown RBP29.92■■■□□ 2.38
PLOD3-215ENST00000487563 GGA3Q9NZ52 723 aa29.92■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms