RNA–Protein interactions for RNA: ENST00000487547.1

USP34-216, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 3

Gene USP34, Length 612 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-216ENST00000487547 ZNF417Q8TAU3 575 aa11□□□□□ -0.65
USP34-216ENST00000487547 TTC9Q92623 222 aa11□□□□□ -0.65
USP34-216ENST00000487547 ZNF587Q96SQ5 575 aaPredicted RBP11□□□□□ -0.65
USP34-216ENST00000487547 TMEM63CQ9P1W3 806 aa11□□□□□ -0.65
USP34-216ENST00000487547 SPDYE3A6NKU9 549 aa10.99□□□□□ -0.65
USP34-216ENST00000487547 CPB1P15086 417 aa10.99□□□□□ -0.65
USP34-216ENST00000487547 LINC00114Q6XXX2 140 aa10.99□□□□□ -0.65
USP34-216ENST00000487547 C20orf204Q6ZNR8 217 aa10.99□□□□□ -0.65
USP34-216ENST00000487547 NOP53Q9NZM5 478 aaKnown RBP10.99□□□□□ -0.65
USP34-216ENST00000487547 DCTN4Q9UJW0 460 aa10.99□□□□□ -0.65
USP34-216ENST00000487547 HOXB4P17483 251 aaPredicted RBP10.98□□□□□ -0.65
USP34-216ENST00000487547 CES1P23141 567 aa10.98□□□□□ -0.65
USP34-216ENST00000487547 SNRPNP63162 240 aaKnown RBP10.98□□□□□ -0.65
USP34-216ENST00000487547 PSAPL1Q6NUJ1 521 aa10.98□□□□□ -0.65
USP34-216ENST00000487547 TMC1Q8TDI8 760 aa10.98□□□□□ -0.65
USP34-216ENST00000487547 SNX29Q8TEQ0 813 aa10.98□□□□□ -0.65
USP34-216ENST00000487547 DMRTB1Q96MA1 342 aa10.98□□□□□ -0.65
USP34-216ENST00000487547 RBCK1Q9BYM8 510 aa10.98□□□□□ -0.65
USP34-216ENST00000487547 TNFRSF21O75509 655 aa10.97□□□□□ -0.65
USP34-216ENST00000487547 EIF2AK2P19525 551 aaKnown RBP10.97□□□□□ -0.65
USP34-216ENST00000487547 MLLT1Q03111 559 aaPredicted RBP10.97□□□□□ -0.65
USP34-216ENST00000487547 ALYREFQ86V81 257 aaKnown RBP10.97□□□□□ -0.65
USP34-216ENST00000487547 JPH1Q9HDC5 661 aaPredicted RBP10.97□□□□□ -0.65
USP34-216ENST00000487547 PHACTR2O75167 634 aa10.96□□□□□ -0.65
USP34-216ENST00000487547 ALBP02768 609 aa10.96□□□□□ -0.65
USP34-216ENST00000487547 PERM1Q5SV97 790 aa10.96□□□□□ -0.65
USP34-216ENST00000487547 CACTIN-AS1Q8N1I8 211 aa10.96□□□□□ -0.65
USP34-216ENST00000487547 NSUN5Q96P11 429 aaKnown RBP10.96□□□□□ -0.65
USP34-216ENST00000487547 A6NHS1 94 aa10.95□□□□□ -0.66
USP34-216ENST00000487547 KIF4AO95239 1232 aa10.95□□□□□ -0.66
USP34-216ENST00000487547 HFE2Q6ZVN8 426 aa10.95□□□□□ -0.66
USP34-216ENST00000487547 NCAPG2Q86XI2 1143 aa10.95□□□□□ -0.66
USP34-216ENST00000487547 C1orf127Q8N9H9 656 aa10.95□□□□□ -0.66
USP34-216ENST00000487547 FAM129BQ96TA1 746 aa10.95□□□□□ -0.66
USP34-216ENST00000487547 CNTN3Q9P232 1028 aa10.95□□□□□ -0.66
USP34-216ENST00000487547 NAGPAQ9UK23 515 aa10.95□□□□□ -0.66
USP34-216ENST00000487547 J3QW42 95 aa10.94□□□□□ -0.66
USP34-216ENST00000487547 NUDT8Q8WV74 236 aa10.94□□□□□ -0.66
USP34-216ENST00000487547 PLD4Q96BZ4 506 aa10.94□□□□□ -0.66
USP34-216ENST00000487547 LPIN3Q9BQK8 851 aa10.94□□□□□ -0.66
USP34-216ENST00000487547 ZSCAN29Q8IWY8 852 aaPredicted RBP10.93□□□□□ -0.66
USP34-216ENST00000487547 DCAF5Q96JK2 942 aa10.93□□□□□ -0.66
USP34-216ENST00000487547 SMG9Q9H0W8 520 aaKnown RBP10.93□□□□□ -0.66
USP34-216ENST00000487547 SALL4Q9UJQ4 1053 aa10.93□□□□□ -0.66
USP34-216ENST00000487547 EDN3P14138 238 aa10.92□□□□□ -0.66
USP34-216ENST00000487547 MAPK1P28482 360 aa10.92□□□□□ -0.66
USP34-216ENST00000487547 ZFYVE28Q9HCC9 887 aa10.92□□□□□ -0.66
USP34-216ENST00000487547 SMNDC1O75940 238 aaKnown RBP eCLIP10.91□□□□□ -0.66
USP34-216ENST00000487547 CYP2E1P05181 493 aaPredicted RBP10.91□□□□□ -0.66
USP34-216ENST00000487547 AFF1P51825 1210 aaKnown RBP10.91□□□□□ -0.66
USP34-216ENST00000487547 SND1Q7KZF4 910 aaKnown RBP eCLIP10.91□□□□□ -0.66
USP34-216ENST00000487547 ALKBH8Q96BT7 664 aaKnown RBP10.91□□□□□ -0.66
USP34-216ENST00000487547 CHRDQ9H2X0 955 aa10.91□□□□□ -0.66
USP34-216ENST00000487547 AMOTL2Q9Y2J4 779 aa10.91□□□□□ -0.66
USP34-216ENST00000487547 COL13A1Q5TAT6 717 aaPredicted RBP10.9□□□□□ -0.66
USP34-216ENST00000487547 CEP120Q8N960 986 aa10.9□□□□□ -0.66
USP34-216ENST00000487547 PLVAPQ9BX97 442 aa10.9□□□□□ -0.66
USP34-216ENST00000487547 DNAJC25Q9H1X3 360 aa10.9□□□□□ -0.66
USP34-216ENST00000487547 NID1P14543 1247 aa10.89□□□□□ -0.67
USP34-216ENST00000487547 GPAT2Q6NUI2 795 aa10.89□□□□□ -0.67
USP34-216ENST00000487547 C8orf86Q6ZUL3 223 aa10.89□□□□□ -0.67
USP34-216ENST00000487547 FOXD3Q9UJU5 478 aaPredicted RBP10.89□□□□□ -0.67
USP34-216ENST00000487547 IGHA1P01876 353 aa10.88□□□□□ -0.67
USP34-216ENST00000487547 COL9A3Q14050 684 aaPredicted RBP10.88□□□□□ -0.67
USP34-216ENST00000487547 PRRT3Q5FWE3 981 aa10.88□□□□□ -0.67
USP34-216ENST00000487547 TRAPPC3LQ5T215 181 aa10.88□□□□□ -0.67
USP34-216ENST00000487547 PBX4Q9BYU1 374 aa10.88□□□□□ -0.67
USP34-216ENST00000487547 MUC3BQ9H195 1237 aa10.88□□□□□ -0.67
USP34-216ENST00000487547 KANSL3Q9P2N6 904 aa10.88□□□□□ -0.67
USP34-216ENST00000487547 FAM177BA6PVY3 158 aa10.87□□□□□ -0.67
USP34-216ENST00000487547 EREGO14944 169 aa10.87□□□□□ -0.67
USP34-216ENST00000487547 CPNE3O75131 537 aaKnown RBP10.87□□□□□ -0.67
USP34-216ENST00000487547 ITGB2P05107 769 aa10.87□□□□□ -0.67
USP34-216ENST00000487547 PLCB3Q01970 1234 aa10.87□□□□□ -0.67
USP34-216ENST00000487547 TRIM28Q13263 835 aaKnown RBP10.87□□□□□ -0.67
USP34-216ENST00000487547 MSL1Q68DK7 614 aa10.87□□□□□ -0.67
USP34-216ENST00000487547 TMC7Q7Z402 723 aa10.87□□□□□ -0.67
USP34-216ENST00000487547 WFDC8Q8IUA0 241 aa10.87□□□□□ -0.67
USP34-216ENST00000487547 TRIM11Q96F44 468 aa10.87□□□□□ -0.67
USP34-216ENST00000487547 NIF3L1Q9GZT8 377 aa10.87□□□□□ -0.67
USP34-216ENST00000487547 ZBTB7CA1YPR0 619 aa10.86□□□□□ -0.67
USP34-216ENST00000487547 RAC1P63000 192 aa10.86□□□□□ -0.67
USP34-216ENST00000487547 GRIK5Q16478 980 aa10.86□□□□□ -0.67
USP34-216ENST00000487547 PLA2G4EQ3MJ16 856 aa10.86□□□□□ -0.67
USP34-216ENST00000487547 CEP135Q66GS9 1140 aa10.86□□□□□ -0.67
USP34-216ENST00000487547 DTWD1Q8N5C7 304 aa10.86□□□□□ -0.67
USP34-216ENST00000487547 IGHA2P01877 340 aa10.85□□□□□ -0.67
USP34-216ENST00000487547 COL8A1P27658 744 aa10.85□□□□□ -0.67
USP34-216ENST00000487547 DCAF11Q8TEB1 546 aa10.85□□□□□ -0.67
USP34-216ENST00000487547 ASB16Q96NS5 453 aa10.85□□□□□ -0.67
USP34-216ENST00000487547 GPR182O15218 404 aa10.84□□□□□ -0.67
USP34-216ENST00000487547 SPATA31C1P0DKV0 1188 aa10.84□□□□□ -0.67
USP34-216ENST00000487547 GALNT12Q8IXK2 581 aa10.84□□□□□ -0.67
USP34-216ENST00000487547 RASSF4Q9H2L5 321 aa10.84□□□□□ -0.67
USP34-216ENST00000487547 SUV39H2Q9H5I1 410 aa10.84□□□□□ -0.67
USP34-216ENST00000487547 DZANK1Q9NVP4 752 aa10.84□□□□□ -0.67
USP34-216ENST00000487547 TREHO43280 583 aa10.83□□□□□ -0.68
USP34-216ENST00000487547 PTPRAP18433 802 aa10.83□□□□□ -0.68
USP34-216ENST00000487547 ATP11AP98196 1134 aa10.83□□□□□ -0.68
USP34-216ENST00000487547 GDF6Q6KF10 455 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms