RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 INHBEP58166 350 aa15.73■□□□□ 0.11
TRIM56-204ENST00000487252 GRAPQ13588 217 aa15.73■□□□□ 0.11
TRIM56-204ENST00000487252 SPRYD7Q5W111 196 aa15.73■□□□□ 0.11
TRIM56-204ENST00000487252 TMC4Q7Z404 712 aa15.73■□□□□ 0.11
TRIM56-204ENST00000487252 PPP1R42Q7Z4L9 355 aa15.73■□□□□ 0.11
TRIM56-204ENST00000487252 IFNL1Q8IU54 200 aa15.73■□□□□ 0.11
TRIM56-204ENST00000487252 GRAPLQ8TC17 118 aaPredicted RBP15.73■□□□□ 0.11
TRIM56-204ENST00000487252 PTPN12Q05209 780 aaKnown RBP15.72■□□□□ 0.11
TRIM56-204ENST00000487252 PARP10Q53GL7 1025 aa15.72■□□□□ 0.11
TRIM56-204ENST00000487252 GIGYF2Q6Y7W6 1299 aaKnown RBP15.72■□□□□ 0.11
TRIM56-204ENST00000487252 CD99L2Q8TCZ2 262 aa15.72■□□□□ 0.11
TRIM56-204ENST00000487252 EFCC1Q9HA90 598 aa15.72■□□□□ 0.11
TRIM56-204ENST00000487252 PSME4Q14997 1843 aa15.72■□□□□ 0.11
TRIM56-204ENST00000487252 LDLRAD1Q5T700 205 aa15.71■□□□□ 0.11
TRIM56-204ENST00000487252 SPTBN5Q9NRC6 3674 aaKnown RBP15.71■□□□□ 0.11
TRIM56-204ENST00000487252 IGF2BP3O00425 579 aaKnown RBP eCLIP15.7■□□□□ 0.1
TRIM56-204ENST00000487252 PRAMEF18Q5VWM3 479 aa15.7■□□□□ 0.1
TRIM56-204ENST00000487252 KIF6Q6ZMV9 814 aa15.7■□□□□ 0.1
TRIM56-204ENST00000487252 AGBL3Q8NEM8 1001 aa15.7■□□□□ 0.1
TRIM56-204ENST00000487252 LRCH3Q96II8 777 aa15.7■□□□□ 0.1
TRIM56-204ENST00000487252 GMLQ99445 158 aa15.7■□□□□ 0.1
TRIM56-204ENST00000487252 POLLQ9UGP5 575 aa15.7■□□□□ 0.1
TRIM56-204ENST00000487252 MANSC4A6NHS7 340 aaPredicted RBP15.69■□□□□ 0.1
TRIM56-204ENST00000487252 TCIRG1Q13488 830 aa15.69■□□□□ 0.1
TRIM56-204ENST00000487252 GPR153Q6NV75 609 aa15.69■□□□□ 0.1
TRIM56-204ENST00000487252 NBPF11Q86T75 865 aa15.69■□□□□ 0.1
TRIM56-204ENST00000487252 UTP14AQ9BVJ6 771 aaKnown RBP15.69■□□□□ 0.1
TRIM56-204ENST00000487252 ZBTB3Q9H5J0 574 aa15.69■□□□□ 0.1
TRIM56-204ENST00000487252 COL3A1P02461 1466 aaPredicted RBP15.69■□□□□ 0.1
TRIM56-204ENST00000487252 RIMBP2O15034 1052 aa15.68■□□□□ 0.1
TRIM56-204ENST00000487252 DOK7Q18PE1 504 aa15.68■□□□□ 0.1
TRIM56-204ENST00000487252 SLC4A8Q2Y0W8 1093 aa15.68■□□□□ 0.1
TRIM56-204ENST00000487252 DDX46Q7L014 1031 aaKnown RBP15.68■□□□□ 0.1
TRIM56-204ENST00000487252 UBE2Q1Q7Z7E8 422 aa15.68■□□□□ 0.1
TRIM56-204ENST00000487252 NGEFQ8N5V2 710 aa15.68■□□□□ 0.1
TRIM56-204ENST00000487252 MYOZ2Q9NPC6 264 aa15.68■□□□□ 0.1
TRIM56-204ENST00000487252 SCAF8Q9UPN6 1271 aaKnown RBP15.68■□□□□ 0.1
TRIM56-204ENST00000487252 STXBP5LQ9Y2K9 1186 aa15.68■□□□□ 0.1
TRIM56-204ENST00000487252 ZNF646O15015 1829 aaPredicted RBP15.68■□□□□ 0.1
TRIM56-204ENST00000487252 WTIPA6NIX2 430 aaPredicted RBP15.67■□□□□ 0.1
TRIM56-204ENST00000487252 CRHR2Q13324 411 aa15.67■□□□□ 0.1
TRIM56-204ENST00000487252 SLC9C1Q4G0N8 1177 aa15.67■□□□□ 0.1
TRIM56-204ENST00000487252 AMER1Q5JTC6 1135 aaPredicted RBP15.67■□□□□ 0.1
TRIM56-204ENST00000487252 PHACTR3Q96KR7 559 aa15.67■□□□□ 0.1
TRIM56-204ENST00000487252 NSFL1CQ9UNZ2 370 aaKnown RBP15.67■□□□□ 0.1
TRIM56-204ENST00000487252 ZBTB48P10074 688 aaPredicted RBP15.66■□□□□ 0.1
TRIM56-204ENST00000487252 SP3Q02447 781 aa15.66■□□□□ 0.1
TRIM56-204ENST00000487252 TTLL12Q14166 644 aaPredicted RBP15.66■□□□□ 0.1
TRIM56-204ENST00000487252 RSBN1LQ6PCB5 846 aaPredicted RBP15.66■□□□□ 0.1
TRIM56-204ENST00000487252 DPF3Q92784 378 aa15.66■□□□□ 0.1
TRIM56-204ENST00000487252 SHISA4Q96DD7 197 aa15.66■□□□□ 0.1
TRIM56-204ENST00000487252 PTCH2Q9Y6C5 1203 aa15.66■□□□□ 0.1
TRIM56-204ENST00000487252 HCLS1P14317 486 aaPredicted RBP15.65■□□□□ 0.1
TRIM56-204ENST00000487252 POLR3GLQ9BT43 218 aa15.65■□□□□ 0.1
TRIM56-204ENST00000487252 COL4A1P02462 1669 aa15.64■□□□□ 0.09
TRIM56-204ENST00000487252 C6orf229H3BNL8 230 aa15.64■□□□□ 0.09
TRIM56-204ENST00000487252 ZBTB7BO15156 539 aaPredicted RBP15.64■□□□□ 0.09
TRIM56-204ENST00000487252 USP17L8P0C7I0 530 aa15.64■□□□□ 0.09
TRIM56-204ENST00000487252 NF2P35240 595 aa15.64■□□□□ 0.09
TRIM56-204ENST00000487252 GPSM2P81274 684 aa15.64■□□□□ 0.09
TRIM56-204ENST00000487252 ANKRD13DQ6ZTN6 518 aa15.64■□□□□ 0.09
TRIM56-204ENST00000487252 ARMC9Q7Z3E5 817 aa15.64■□□□□ 0.09
TRIM56-204ENST00000487252 EYA3Q99504 573 aa15.64■□□□□ 0.09
TRIM56-204ENST00000487252 PRDM6Q9NQX0 595 aa15.64■□□□□ 0.09
TRIM56-204ENST00000487252 ERBB4Q15303 1308 aa15.64■□□□□ 0.09
TRIM56-204ENST00000487252 NBPF9Q3BBW0 867 aa15.63■□□□□ 0.09
TRIM56-204ENST00000487252 MCM10Q7L590 875 aa15.63■□□□□ 0.09
TRIM56-204ENST00000487252 LRP10Q7Z4F1 713 aa15.63■□□□□ 0.09
TRIM56-204ENST00000487252 TBC1D16Q8TBP0 767 aa15.63■□□□□ 0.09
TRIM56-204ENST00000487252 RRP7AQ9Y3A4 280 aaKnown RBP15.63■□□□□ 0.09
TRIM56-204ENST00000487252 KNSTRNQ9Y448 316 aa15.63■□□□□ 0.09
TRIM56-204ENST00000487252 MAP3K11Q16584 847 aa15.62■□□□□ 0.09
TRIM56-204ENST00000487252 TESPA1A2RU30 521 aaPredicted RBP15.61■□□□□ 0.09
TRIM56-204ENST00000487252 DEFB123Q8N688 67 aa15.61■□□□□ 0.09
TRIM56-204ENST00000487252 CELF1Q92879 486 aaKnown RBP15.61■□□□□ 0.09
TRIM56-204ENST00000487252 WNK4Q96J92 1243 aa15.61■□□□□ 0.09
TRIM56-204ENST00000487252 MYL6BP14649 208 aa15.6■□□□□ 0.09
TRIM56-204ENST00000487252 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.6■□□□□ 0.09
TRIM56-204ENST00000487252 PTPN18Q99952 460 aa15.6■□□□□ 0.09
TRIM56-204ENST00000487252 HTATIP2Q9BUP3 242 aa15.6■□□□□ 0.09
TRIM56-204ENST00000487252 ZC3H12CQ9C0D7 883 aaKnown RBP15.6■□□□□ 0.09
TRIM56-204ENST00000487252 MTMR10Q9NXD2 777 aa15.6■□□□□ 0.09
TRIM56-204ENST00000487252 PODXL2Q9NZ53 605 aa15.6■□□□□ 0.09
TRIM56-204ENST00000487252 NR2E3Q9Y5X4 410 aa15.6■□□□□ 0.09
TRIM56-204ENST00000487252 MUC3AQ02505 3323 aa15.59■□□□□ 0.09
TRIM56-204ENST00000487252 UNCXA6NJT0 531 aa15.59■□□□□ 0.09
TRIM56-204ENST00000487252 WNT10BO00744 389 aa15.59■□□□□ 0.09
TRIM56-204ENST00000487252 ARHGEF6Q15052 776 aa15.59■□□□□ 0.09
TRIM56-204ENST00000487252 TAF7Q15545 349 aaPredicted RBP15.59■□□□□ 0.09
TRIM56-204ENST00000487252 OTUD7BQ6GQQ9 843 aa15.59■□□□□ 0.09
TRIM56-204ENST00000487252 NLRP10Q86W26 655 aa15.59■□□□□ 0.09
TRIM56-204ENST00000487252 SLC10A4Q96EP9 437 aa15.59■□□□□ 0.09
TRIM56-204ENST00000487252 ANGEL1Q9UNK9 670 aaKnown RBP15.59■□□□□ 0.09
TRIM56-204ENST00000487252 U2SURPO15042 1029 aaKnown RBP15.58■□□□□ 0.08
TRIM56-204ENST00000487252 MYCP01106 439 aaPredicted RBP15.58■□□□□ 0.08
TRIM56-204ENST00000487252 PRKG1Q13976 671 aa15.58■□□□□ 0.08
TRIM56-204ENST00000487252 SF3B3Q15393 1217 aaKnown RBP15.58■□□□□ 0.08
TRIM56-204ENST00000487252 SH3TC2Q8TF17 1288 aa15.58■□□□□ 0.08
TRIM56-204ENST00000487252 RSPH6AQ9H0K4 717 aa15.58■□□□□ 0.08
TRIM56-204ENST00000487252 SH3TC1Q8TE82 1336 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms