RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 ANKIB1Q9P2G1 1089 aa24.36■■□□□ 1.49
CLIP2-206ENST00000487091 PLA2G12BQ9BX93 195 aa24.35■■□□□ 1.49
CLIP2-206ENST00000487091 DBNDD1Q9H9R9 158 aa24.35■■□□□ 1.49
CLIP2-206ENST00000487091 GGA1Q9UJY5 639 aa24.35■■□□□ 1.49
CLIP2-206ENST00000487091 UFL1O94874 794 aa24.34■■□□□ 1.49
CLIP2-206ENST00000487091 CASP7P55210 303 aa24.34■■□□□ 1.49
CLIP2-206ENST00000487091 GREM2Q9H772 168 aa24.34■■□□□ 1.49
CLIP2-206ENST00000487091 ECE2O60344 883 aa24.33■■□□□ 1.49
CLIP2-206ENST00000487091 DPF2Q92785 391 aa24.33■■□□□ 1.49
CLIP2-206ENST00000487091 BSDC1Q9NW68 430 aaPredicted RBP24.33■■□□□ 1.49
CLIP2-206ENST00000487091 XDHP47989 1333 aa24.33■■□□□ 1.48
CLIP2-206ENST00000487091 DOK7Q18PE1 504 aa24.32■■□□□ 1.48
CLIP2-206ENST00000487091 CNOT7Q9UIV1 285 aaKnown RBP24.32■■□□□ 1.48
CLIP2-206ENST00000487091 PCNTO95613 3336 aa24.32■■□□□ 1.48
CLIP2-206ENST00000487091 CNTNAP1P78357 1384 aa24.31■■□□□ 1.48
CLIP2-206ENST00000487091 H7C1D1 291 aa24.31■■□□□ 1.48
CLIP2-206ENST00000487091 PSMD14O00487 310 aa24.31■■□□□ 1.48
CLIP2-206ENST00000487091 ATP2B4P23634 1241 aa24.31■■□□□ 1.48
CLIP2-206ENST00000487091 GPR101Q96P66 508 aaPredicted RBP24.31■■□□□ 1.48
CLIP2-206ENST00000487091 MKRN1Q9UHC7 482 aaKnown RBP24.31■■□□□ 1.48
CLIP2-206ENST00000487091 PGAP2Q9UHJ9 254 aa24.31■■□□□ 1.48
CLIP2-206ENST00000487091 CSF1RP07333 972 aa24.3■■□□□ 1.48
CLIP2-206ENST00000487091 RPS12P25398 132 aaKnown RBP24.3■■□□□ 1.48
CLIP2-206ENST00000487091 BEND3Q5T5X7 828 aa24.3■■□□□ 1.48
CLIP2-206ENST00000487091 ZC3H15Q8WU90 426 aaKnown RBP24.3■■□□□ 1.48
CLIP2-206ENST00000487091 F6X3S4 739 aa24.29■■□□□ 1.48
CLIP2-206ENST00000487091 G3V3G9 751 aa24.29■■□□□ 1.48
CLIP2-206ENST00000487091 DCAF8Q5TAQ9 597 aa24.29■■□□□ 1.48
CLIP2-206ENST00000487091 MINPP1Q9UNW1 487 aa24.29■■□□□ 1.48
CLIP2-206ENST00000487091 ZBTB12Q9Y330 459 aaPredicted RBP24.29■■□□□ 1.48
CLIP2-206ENST00000487091 MICALL2Q8IY33 904 aa24.28■■□□□ 1.48
CLIP2-206ENST00000487091 KCNQ5Q9NR82 932 aa24.28■■□□□ 1.48
CLIP2-206ENST00000487091 VIL1P09327 827 aaKnown RBP24.27■■□□□ 1.48
CLIP2-206ENST00000487091 IGHMBP2P38935 993 aaKnown RBP24.27■■□□□ 1.48
CLIP2-206ENST00000487091 HIRAP54198 1017 aaPredicted RBP24.27■■□□□ 1.48
CLIP2-206ENST00000487091 SCN9AQ15858 1988 aa24.26■■□□□ 1.47
CLIP2-206ENST00000487091 E9PSI1 815 aa24.26■■□□□ 1.47
CLIP2-206ENST00000487091 ITGA6P23229 1130 aa24.26■■□□□ 1.47
CLIP2-206ENST00000487091 TRPM4Q8TD43 1214 aa24.26■■□□□ 1.47
CLIP2-206ENST00000487091 TRPM7Q96QT4 1865 aa24.26■■□□□ 1.47
CLIP2-206ENST00000487091 SHTN1A0MZ66 631 aa24.25■■□□□ 1.47
CLIP2-206ENST00000487091 RASSF10A6NK89 507 aa24.25■■□□□ 1.47
CLIP2-206ENST00000487091 FAM161AQ3B820 660 aa24.25■■□□□ 1.47
CLIP2-206ENST00000487091 SPEF2Q9C093 1822 aa24.24■■□□□ 1.47
CLIP2-206ENST00000487091 HSPA1AP0DMV8 641 aaKnown RBP24.24■■□□□ 1.47
CLIP2-206ENST00000487091 HSPA1BP0DMV9 641 aaKnown RBP24.24■■□□□ 1.47
CLIP2-206ENST00000487091 DEFB115Q30KQ5 88 aa24.24■■□□□ 1.47
CLIP2-206ENST00000487091 PODNQ7Z5L7 613 aa24.24■■□□□ 1.47
CLIP2-206ENST00000487091 CCER2I3L3R5 266 aa24.23■■□□□ 1.47
CLIP2-206ENST00000487091 TRAF5O00463 557 aa24.23■■□□□ 1.47
CLIP2-206ENST00000487091 ALDH1L1O75891 902 aa24.23■■□□□ 1.47
CLIP2-206ENST00000487091 VEGFBP49765 207 aa24.23■■□□□ 1.47
CLIP2-206ENST00000487091 CCT4P50991 539 aaKnown RBP24.23■■□□□ 1.47
CLIP2-206ENST00000487091 FMR1Q06787 632 aaKnown RBP eCLIP24.23■■□□□ 1.47
CLIP2-206ENST00000487091 MPHOSPH8Q99549 860 aa24.23■■□□□ 1.47
CLIP2-206ENST00000487091 LEMD3Q9Y2U8 911 aa24.23■■□□□ 1.47
CLIP2-206ENST00000487091 MED23Q9ULK4 1368 aa24.23■■□□□ 1.47
CLIP2-206ENST00000487091 ZNF609O15014 1411 aa24.22■■□□□ 1.47
CLIP2-206ENST00000487091 ANKRD18BA2A2Z9 1011 aa24.22■■□□□ 1.47
CLIP2-206ENST00000487091 FOXO4P98177 505 aa24.22■■□□□ 1.47
CLIP2-206ENST00000487091 SLFN5Q08AF3 891 aa24.22■■□□□ 1.47
CLIP2-206ENST00000487091 IFFO2Q5TF58 517 aa24.22■■□□□ 1.47
CLIP2-206ENST00000487091 CST9Q5W186 159 aa24.22■■□□□ 1.47
CLIP2-206ENST00000487091 CDC37L1Q7L3B6 337 aa24.22■■□□□ 1.47
CLIP2-206ENST00000487091 SAMD7Q7Z3H4 446 aa24.22■■□□□ 1.47
CLIP2-206ENST00000487091 ANKRD2Q9GZV1 360 aa24.22■■□□□ 1.47
CLIP2-206ENST00000487091 ABT1Q9ULW3 272 aaKnown RBP24.22■■□□□ 1.47
CLIP2-206ENST00000487091 GRM8O00222 908 aa24.21■■□□□ 1.47
CLIP2-206ENST00000487091 AGBL3Q8NEM8 1001 aa24.21■■□□□ 1.47
CLIP2-206ENST00000487091 PSME4Q14997 1843 aa24.21■■□□□ 1.47
CLIP2-206ENST00000487091 WTIPA6NIX2 430 aaPredicted RBP24.2■■□□□ 1.46
CLIP2-206ENST00000487091 RSBN1LQ6PCB5 846 aaPredicted RBP24.2■■□□□ 1.46
CLIP2-206ENST00000487091 SLC4A10Q6U841 1118 aa24.2■■□□□ 1.46
CLIP2-206ENST00000487091 GLIS2Q9BZE0 524 aaPredicted RBP24.2■■□□□ 1.46
CLIP2-206ENST00000487091 SRCIN1Q9C0H9 1055 aa24.2■■□□□ 1.46
CLIP2-206ENST00000487091 IFIT5Q13325 482 aaKnown RBP24.19■■□□□ 1.46
CLIP2-206ENST00000487091 TBC1D10BQ4KMP7 808 aaPredicted RBP24.19■■□□□ 1.46
CLIP2-206ENST00000487091 MRPL50Q8N5N7 158 aaKnown RBP24.19■■□□□ 1.46
CLIP2-206ENST00000487091 C9orf78Q9NZ63 289 aaPredicted RBP24.19■■□□□ 1.46
CLIP2-206ENST00000487091 USP17L3A6NCW0 530 aa24.18■■□□□ 1.46
CLIP2-206ENST00000487091 USP17L4A6NCW7 530 aa24.18■■□□□ 1.46
CLIP2-206ENST00000487091 EGFRP00533 1210 aa24.18■■□□□ 1.46
CLIP2-206ENST00000487091 USP17L1Q7RTZ2 530 aa24.18■■□□□ 1.46
CLIP2-206ENST00000487091 COA1Q9GZY4 146 aa24.18■■□□□ 1.46
CLIP2-206ENST00000487091 ZNF804BA4D1E1 1349 aa24.17■■□□□ 1.46
CLIP2-206ENST00000487091 ZNF280AP59817 542 aaPredicted RBP24.17■■□□□ 1.46
CLIP2-206ENST00000487091 LMBR1LQ6UX01 489 aa24.17■■□□□ 1.46
CLIP2-206ENST00000487091 GMLQ99445 158 aa24.17■■□□□ 1.46
CLIP2-206ENST00000487091 TLL2Q9Y6L7 1015 aa24.17■■□□□ 1.46
CLIP2-206ENST00000487091 POLR2AP24928 1970 aaKnown RBP24.16■■□□□ 1.46
CLIP2-206ENST00000487091 PTPRCP08575 1304 aa24.16■■□□□ 1.46
CLIP2-206ENST00000487091 CELF2O95319 508 aaKnown RBP24.16■■□□□ 1.46
CLIP2-206ENST00000487091 CHRNDQ07001 517 aa24.16■■□□□ 1.46
CLIP2-206ENST00000487091 KIF4BQ2VIQ3 1234 aa24.16■■□□□ 1.46
CLIP2-206ENST00000487091 EPHA10Q5JZY3 1008 aa24.16■■□□□ 1.46
CLIP2-206ENST00000487091 RBM26Q5T8P6 1007 aaKnown RBP24.16■■□□□ 1.46
CLIP2-206ENST00000487091 CHMP3Q9Y3E7 222 aa24.16■■□□□ 1.46
CLIP2-206ENST00000487091 WDR33Q9C0J8 1336 aaKnown RBP24.15■■□□□ 1.46
CLIP2-206ENST00000487091 TXNRD3Q86VQ6 643 aa24.15■■□□□ 1.46
CLIP2-206ENST00000487091 TRMT2AQ8IZ69 625 aaKnown RBP24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms