RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 NLRP10Q86W26 655 aa10.07□□□□□ -0.8
PDPN-205ENST00000487038 TRIOBPQ9H2D6 2365 aa10.07□□□□□ -0.8
PDPN-205ENST00000487038 PITPNM2Q9BZ72 1349 aa10.07□□□□□ -0.8
PDPN-205ENST00000487038 MYH3P11055 1940 aa10.06□□□□□ -0.8
PDPN-205ENST00000487038 RTL9Q8NET4 1388 aa10.06□□□□□ -0.8
PDPN-205ENST00000487038 ZNF646O15015 1829 aaPredicted RBP10.06□□□□□ -0.8
PDPN-205ENST00000487038 ANGEL2Q5VTE6 544 aaKnown RBP10.06□□□□□ -0.8
PDPN-205ENST00000487038 THUMPD2Q9BTF0 503 aaKnown RBP10.06□□□□□ -0.8
PDPN-205ENST00000487038 TSPYL4Q9UJ04 414 aa10.06□□□□□ -0.8
PDPN-205ENST00000487038 MAPK8IP3Q9UPT6 1336 aa10.06□□□□□ -0.8
PDPN-205ENST00000487038 TBC1D8O95759 1140 aa10.05□□□□□ -0.8
PDPN-205ENST00000487038 EIF2S2P20042 333 aaKnown RBP10.05□□□□□ -0.8
PDPN-205ENST00000487038 NF2P35240 595 aa10.05□□□□□ -0.8
PDPN-205ENST00000487038 HABP4Q5JVS0 413 aaKnown RBP10.05□□□□□ -0.8
PDPN-205ENST00000487038 AGBL3Q8NEM8 1001 aa10.05□□□□□ -0.8
PDPN-205ENST00000487038 NECTIN2Q92692 538 aa10.05□□□□□ -0.8
PDPN-205ENST00000487038 ZC3H12CQ9C0D7 883 aaKnown RBP10.05□□□□□ -0.8
PDPN-205ENST00000487038 PNNQ9H307 717 aaKnown RBP10.05□□□□□ -0.8
PDPN-205ENST00000487038 KIAA0100Q14667 2235 aaKnown RBP10.05□□□□□ -0.8
PDPN-205ENST00000487038 GPR25O00155 361 aa10.04□□□□□ -0.8
PDPN-205ENST00000487038 FKTNO75072 461 aa10.04□□□□□ -0.8
PDPN-205ENST00000487038 VIL1P09327 827 aaKnown RBP10.04□□□□□ -0.8
PDPN-205ENST00000487038 PPP2R1AP30153 589 aa10.04□□□□□ -0.8
PDPN-205ENST00000487038 AIMP1Q12904 312 aaKnown RBP10.04□□□□□ -0.8
PDPN-205ENST00000487038 TCIRG1Q13488 830 aa10.04□□□□□ -0.8
PDPN-205ENST00000487038 SCARF1Q14162 830 aa10.04□□□□□ -0.8
PDPN-205ENST00000487038 TTLL12Q14166 644 aaPredicted RBP10.04□□□□□ -0.8
PDPN-205ENST00000487038 NFE2L2Q16236 605 aa10.04□□□□□ -0.8
PDPN-205ENST00000487038 DOK7Q18PE1 504 aa10.04□□□□□ -0.8
PDPN-205ENST00000487038 INTS3Q68E01 1043 aaKnown RBP10.04□□□□□ -0.8
PDPN-205ENST00000487038 LRP10Q7Z4F1 713 aa10.04□□□□□ -0.8
PDPN-205ENST00000487038 COL4A1P02462 1669 aa10.03□□□□□ -0.8
PDPN-205ENST00000487038 ALDH1A1P00352 501 aa10.03□□□□□ -0.8
PDPN-205ENST00000487038 TM4SF4P48230 202 aa10.03□□□□□ -0.8
PDPN-205ENST00000487038 GPSM2P81274 684 aa10.03□□□□□ -0.8
PDPN-205ENST00000487038 PDIA6Q15084 440 aa10.03□□□□□ -0.8
PDPN-205ENST00000487038 SF3B3Q15393 1217 aaKnown RBP10.03□□□□□ -0.8
PDPN-205ENST00000487038 RSBN1LQ6PCB5 846 aaPredicted RBP10.03□□□□□ -0.8
PDPN-205ENST00000487038 COPS6Q7L5N1 327 aa10.03□□□□□ -0.8
PDPN-205ENST00000487038 TBC1D16Q8TBP0 767 aa10.03□□□□□ -0.8
PDPN-205ENST00000487038 CELF1Q92879 486 aaKnown RBP10.03□□□□□ -0.8
PDPN-205ENST00000487038 CFHR5Q9BXR6 569 aa10.03□□□□□ -0.8
PDPN-205ENST00000487038 MYOZ2Q9NPC6 264 aa10.03□□□□□ -0.8
PDPN-205ENST00000487038 POLLQ9UGP5 575 aa10.03□□□□□ -0.8
PDPN-205ENST00000487038 UFL1O94874 794 aa10.02□□□□□ -0.81
PDPN-205ENST00000487038 ANXA1P04083 346 aa10.02□□□□□ -0.81
PDPN-205ENST00000487038 HSP90B1P14625 803 aaKnown RBP10.02□□□□□ -0.81
PDPN-205ENST00000487038 ZNF280AP59817 542 aaPredicted RBP10.02□□□□□ -0.81
PDPN-205ENST00000487038 XAGE3Q8WTP9 111 aa10.02□□□□□ -0.81
PDPN-205ENST00000487038 KCNQ5Q9NR82 932 aa10.02□□□□□ -0.81
PDPN-205ENST00000487038 BABAM1Q9NWV8 329 aa10.02□□□□□ -0.81
PDPN-205ENST00000487038 PODXL2Q9NZ53 605 aa10.02□□□□□ -0.81
PDPN-205ENST00000487038 ANKIB1Q9P2G1 1089 aa10.02□□□□□ -0.81
PDPN-205ENST00000487038 ASTN2O75129 1339 aaPredicted RBP10.02□□□□□ -0.81
PDPN-205ENST00000487038 USP17L8P0C7I0 530 aa10.01□□□□□ -0.81
PDPN-205ENST00000487038 PROSER3Q2NL68 480 aa10.01□□□□□ -0.81
PDPN-205ENST00000487038 GGA1Q9UJY5 639 aa10.01□□□□□ -0.81
PDPN-205ENST00000487038 COL1A1P02452 1464 aaPredicted RBP10.01□□□□□ -0.81
PDPN-205ENST00000487038 RANBP2P49792 3224 aaKnown RBP10.01□□□□□ -0.81
PDPN-205ENST00000487038 SZT2Q5T011 3432 aa10□□□□□ -0.81
PDPN-205ENST00000487038 UBE2Q2LH0YL09 131 aa10□□□□□ -0.81
PDPN-205ENST00000487038 RPS8P62241 208 aaKnown RBP10□□□□□ -0.81
PDPN-205ENST00000487038 LMOD3Q0VAK6 560 aa10□□□□□ -0.81
PDPN-205ENST00000487038 ARMC9Q7Z3E5 817 aa10□□□□□ -0.81
PDPN-205ENST00000487038 CCER1Q8TC90 406 aaPredicted RBP10□□□□□ -0.81
PDPN-205ENST00000487038 FAM89AQ96GI7 184 aa10□□□□□ -0.81
PDPN-205ENST00000487038 TRIM17Q9Y577 477 aa10□□□□□ -0.81
PDPN-205ENST00000487038 MYO3BQ8WXR4 1341 aa10□□□□□ -0.81
PDPN-205ENST00000487038 USP17L3A6NCW0 530 aa9.99□□□□□ -0.81
PDPN-205ENST00000487038 USP17L4A6NCW7 530 aa9.99□□□□□ -0.81
PDPN-205ENST00000487038 MKRN3Q13064 507 aaKnown RBP9.99□□□□□ -0.81
PDPN-205ENST00000487038 MOB2Q70IA6 237 aa9.99□□□□□ -0.81
PDPN-205ENST00000487038 USP17L1Q7RTZ2 530 aa9.99□□□□□ -0.81
PDPN-205ENST00000487038 PODNQ7Z5L7 613 aa9.99□□□□□ -0.81
PDPN-205ENST00000487038 OGFOD1Q8N543 542 aa9.99□□□□□ -0.81
PDPN-205ENST00000487038 PLBD2Q8NHP8 589 aa9.99□□□□□ -0.81
PDPN-205ENST00000487038 PLEKHF1Q96S99 279 aa9.99□□□□□ -0.81
PDPN-205ENST00000487038 XDHP47989 1333 aa9.99□□□□□ -0.81
PDPN-205ENST00000487038 OTOFQ9HC10 1997 aa9.98□□□□□ -0.81
PDPN-205ENST00000487038 MANSC4A6NHS7 340 aaPredicted RBP9.98□□□□□ -0.81
PDPN-205ENST00000487038 IRS4O14654 1257 aaPredicted RBP9.98□□□□□ -0.81
PDPN-205ENST00000487038 MMP14P50281 582 aa9.98□□□□□ -0.81
PDPN-205ENST00000487038 FXR1P51114 621 aaKnown RBP eCLIP9.98□□□□□ -0.81
PDPN-205ENST00000487038 INHBEP58166 350 aa9.98□□□□□ -0.81
PDPN-205ENST00000487038 APOBEC3FQ8IUX4 373 aaKnown RBP9.98□□□□□ -0.81
PDPN-205ENST00000487038 ERO1AQ96HE7 468 aa9.98□□□□□ -0.81
PDPN-205ENST00000487038 A0A0C4DFX4 3053 aa9.98□□□□□ -0.81
PDPN-205ENST00000487038 POTEFA5A3E0 1075 aa9.97□□□□□ -0.81
PDPN-205ENST00000487038 CCDC152Q4G0S7 254 aa9.97□□□□□ -0.81
PDPN-205ENST00000487038 RTL5Q5HYW3 569 aaPredicted RBP9.97□□□□□ -0.81
PDPN-205ENST00000487038 ANKRD13DQ6ZTN6 518 aa9.97□□□□□ -0.81
PDPN-205ENST00000487038 OTOP1Q7RTM1 612 aa9.97□□□□□ -0.81
PDPN-205ENST00000487038 ZNF428Q96B54 188 aa9.97□□□□□ -0.81
PDPN-205ENST00000487038 ISCA1Q9BUE6 129 aa9.97□□□□□ -0.81
PDPN-205ENST00000487038 CHPF2Q9P2E5 772 aa9.97□□□□□ -0.81
PDPN-205ENST00000487038 MED23Q9ULK4 1368 aa9.97□□□□□ -0.81
PDPN-205ENST00000487038 ATP5J2-PTCD1G3V325 749 aa9.96□□□□□ -0.82
PDPN-205ENST00000487038 WNT10BO00744 389 aa9.96□□□□□ -0.82
PDPN-205ENST00000487038 ZBTB48P10074 688 aaPredicted RBP9.96□□□□□ -0.82
PDPN-205ENST00000487038 ATP2B4P23634 1241 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms