RNA–Protein interactions for RNA: ENST00000486978.5

CTDSPL-208, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-208ENST00000486978 ATP6V0A2Q9Y487 856 aa8.44□□□□□ -1.06
CTDSPL-208ENST00000486978 LAMB4A4D0S4 1761 aa8.43□□□□□ -1.06
CTDSPL-208ENST00000486978 MUC3AQ02505 3323 aa8.43□□□□□ -1.06
CTDSPL-208ENST00000486978 SPDYE2BA6NHP3 402 aa8.43□□□□□ -1.06
CTDSPL-208ENST00000486978 SPDYE6P0CI01 402 aa8.43□□□□□ -1.06
CTDSPL-208ENST00000486978 GTF2E1P29083 439 aaPredicted RBP8.43□□□□□ -1.06
CTDSPL-208ENST00000486978 TMPOP42166 694 aaKnown RBP8.43□□□□□ -1.06
CTDSPL-208ENST00000486978 RIPK4P57078 832 aa8.43□□□□□ -1.06
CTDSPL-208ENST00000486978 LMOD3Q0VAK6 560 aa8.43□□□□□ -1.06
CTDSPL-208ENST00000486978 KIAA2012Q0VF49 1180 aa8.43□□□□□ -1.06
CTDSPL-208ENST00000486978 SPDYE2Q495Y8 402 aa8.43□□□□□ -1.06
CTDSPL-208ENST00000486978 SUSD4Q5VX71 490 aa8.43□□□□□ -1.06
CTDSPL-208ENST00000486978 NPM2Q86SE8 214 aaKnown RBP8.43□□□□□ -1.06
CTDSPL-208ENST00000486978 THUMPD2Q9BTF0 503 aaKnown RBP8.43□□□□□ -1.06
CTDSPL-208ENST00000486978 COL25A1Q9BXS0 654 aaPredicted RBP8.43□□□□□ -1.06
CTDSPL-208ENST00000486978 PRO3102Q9H379 93 aa8.43□□□□□ -1.06
CTDSPL-208ENST00000486978 MIS18AQ9NYP9 233 aa8.43□□□□□ -1.06
CTDSPL-208ENST00000486978 TRIM17Q9Y577 477 aa8.43□□□□□ -1.06
CTDSPL-208ENST00000486978 CDHR2Q9BYE9 1310 aa8.43□□□□□ -1.06
CTDSPL-208ENST00000486978 PITPNM2Q9BZ72 1349 aa8.43□□□□□ -1.06
CTDSPL-208ENST00000486978 RTL9Q8NET4 1388 aa8.43□□□□□ -1.06
CTDSPL-208ENST00000486978 GPTP24298 496 aa8.42□□□□□ -1.06
CTDSPL-208ENST00000486978 MNX1P50219 401 aaPredicted RBP8.42□□□□□ -1.06
CTDSPL-208ENST00000486978 TNIP1Q15025 636 aa8.42□□□□□ -1.06
CTDSPL-208ENST00000486978 GRIPAP1Q4V328 841 aa8.42□□□□□ -1.06
CTDSPL-208ENST00000486978 NOM1Q5C9Z4 860 aaKnown RBP8.42□□□□□ -1.06
CTDSPL-208ENST00000486978 TTLL7Q6ZT98 887 aa8.42□□□□□ -1.06
CTDSPL-208ENST00000486978 CCDC146Q8IYE0 955 aa8.42□□□□□ -1.06
CTDSPL-208ENST00000486978 DPF2Q92785 391 aa8.42□□□□□ -1.06
CTDSPL-208ENST00000486978 RUNDC1Q96C34 613 aa8.42□□□□□ -1.06
CTDSPL-208ENST00000486978 DCPSQ96C86 337 aaKnown RBP8.42□□□□□ -1.06
CTDSPL-208ENST00000486978 RBM17Q96I25 401 aaKnown RBP8.42□□□□□ -1.06
CTDSPL-208ENST00000486978 VPS33BQ9H267 617 aa8.42□□□□□ -1.06
CTDSPL-208ENST00000486978 GGA3Q9NZ52 723 aa8.42□□□□□ -1.06
CTDSPL-208ENST00000486978 ZNF652Q9Y2D9 606 aa8.42□□□□□ -1.06
CTDSPL-208ENST00000486978 PTPN22Q9Y2R2 807 aa8.42□□□□□ -1.06
CTDSPL-208ENST00000486978 ABCC4O15439 1325 aa8.42□□□□□ -1.06
CTDSPL-208ENST00000486978 ZSWIM8A7E2V4 1837 aa8.42□□□□□ -1.06
CTDSPL-208ENST00000486978 ZNF316A6NFI3 1004 aaPredicted RBP8.41□□□□□ -1.06
CTDSPL-208ENST00000486978 WTIPA6NIX2 430 aaPredicted RBP8.41□□□□□ -1.06
CTDSPL-208ENST00000486978 EIF4A1P60842 406 aaKnown RBP8.41□□□□□ -1.06
CTDSPL-208ENST00000486978 INTS3Q68E01 1043 aaKnown RBP8.41□□□□□ -1.06
CTDSPL-208ENST00000486978 REM2Q8IYK8 340 aaPredicted RBP8.41□□□□□ -1.06
CTDSPL-208ENST00000486978 NGEFQ8N5V2 710 aa8.41□□□□□ -1.06
CTDSPL-208ENST00000486978 LRCH3Q96II8 777 aa8.41□□□□□ -1.06
CTDSPL-208ENST00000486978 DBNDD1Q9H9R9 158 aa8.41□□□□□ -1.06
CTDSPL-208ENST00000486978 ADAMTS8Q9UP79 889 aa8.41□□□□□ -1.06
CTDSPL-208ENST00000486978 ANKRD36CQ5JPF3 1778 aa8.4□□□□□ -1.06
CTDSPL-208ENST00000486978 NTSR2O95665 410 aa8.4□□□□□ -1.06
CTDSPL-208ENST00000486978 KIF4BQ2VIQ3 1234 aa8.4□□□□□ -1.06
CTDSPL-208ENST00000486978 ANGEL2Q5VTE6 544 aaKnown RBP8.4□□□□□ -1.06
CTDSPL-208ENST00000486978 DPP8Q6V1X1 898 aaPredicted RBP8.4□□□□□ -1.06
CTDSPL-208ENST00000486978 MPNDQ8N594 471 aa8.4□□□□□ -1.06
CTDSPL-208ENST00000486978 ARMC5Q96C12 935 aa8.4□□□□□ -1.06
CTDSPL-208ENST00000486978 CFHR5Q9BXR6 569 aa8.4□□□□□ -1.06
CTDSPL-208ENST00000486978 BABAM1Q9NWV8 329 aa8.4□□□□□ -1.06
CTDSPL-208ENST00000486978 TSPYL4Q9UJ04 414 aa8.4□□□□□ -1.06
CTDSPL-208ENST00000486978 RRP7AQ9Y3A4 280 aaKnown RBP8.4□□□□□ -1.06
CTDSPL-208ENST00000486978 RIMBP2O15034 1052 aa8.39□□□□□ -1.07
CTDSPL-208ENST00000486978 RGL2O15211 777 aa8.39□□□□□ -1.07
CTDSPL-208ENST00000486978 MYCP01106 439 aaPredicted RBP8.39□□□□□ -1.07
CTDSPL-208ENST00000486978 SCARF1Q14162 830 aa8.39□□□□□ -1.07
CTDSPL-208ENST00000486978 NEUROD2Q15784 382 aa8.39□□□□□ -1.07
CTDSPL-208ENST00000486978 DOK7Q18PE1 504 aa8.39□□□□□ -1.07
CTDSPL-208ENST00000486978 SP8Q8IXZ3 490 aa8.39□□□□□ -1.07
CTDSPL-208ENST00000486978 CD99L2Q8TCZ2 262 aa8.39□□□□□ -1.07
CTDSPL-208ENST00000486978 FZD1Q9UP38 647 aa8.39□□□□□ -1.07
CTDSPL-208ENST00000486978 LRRC37AA6NMS7 1700 aa8.39□□□□□ -1.07
CTDSPL-208ENST00000486978 LAMB1P07942 1786 aa8.38□□□□□ -1.07
CTDSPL-208ENST00000486978 PTPN12Q05209 780 aaKnown RBP8.38□□□□□ -1.07
CTDSPL-208ENST00000486978 SULF1Q8IWU6 871 aa8.38□□□□□ -1.07
CTDSPL-208ENST00000486978 ZNF34Q8IZ26 560 aa8.38□□□□□ -1.07
CTDSPL-208ENST00000486978 SUPT20HQ8NEM7 779 aa8.38□□□□□ -1.07
CTDSPL-208ENST00000486978 ZNF428Q96B54 188 aa8.38□□□□□ -1.07
CTDSPL-208ENST00000486978 ZNF333Q96JL9 665 aa8.38□□□□□ -1.07
CTDSPL-208ENST00000486978 NYXQ9GZU5 481 aa8.38□□□□□ -1.07
CTDSPL-208ENST00000486978 POLLQ9UGP5 575 aa8.38□□□□□ -1.07
CTDSPL-208ENST00000486978 TRIM35Q9UPQ4 493 aa8.38□□□□□ -1.07
CTDSPL-208ENST00000486978 ERBB4Q15303 1308 aa8.37□□□□□ -1.07
CTDSPL-208ENST00000486978 IGF2BP3O00425 579 aaKnown RBP eCLIP8.37□□□□□ -1.07
CTDSPL-208ENST00000486978 CHL1O00533 1208 aa8.37□□□□□ -1.07
CTDSPL-208ENST00000486978 Q7L0L9 218 aa8.37□□□□□ -1.07
CTDSPL-208ENST00000486978 ZBTB3Q9H5J0 574 aa8.37□□□□□ -1.07
CTDSPL-208ENST00000486978 ZNF646O15015 1829 aaPredicted RBP8.37□□□□□ -1.07
CTDSPL-208ENST00000486978 PSME4Q14997 1843 aa8.37□□□□□ -1.07
CTDSPL-208ENST00000486978 ZNF609O15014 1411 aa8.37□□□□□ -1.07
CTDSPL-208ENST00000486978 MAP3K15Q6ZN16 1313 aa8.36□□□□□ -1.07
CTDSPL-208ENST00000486978 ERVV-1B6SEH8 477 aa8.36□□□□□ -1.07
CTDSPL-208ENST00000486978 APAF1O14727 1248 aa8.36□□□□□ -1.07
CTDSPL-208ENST00000486978 ANP32CO43423 234 aa8.36□□□□□ -1.07
CTDSPL-208ENST00000486978 ECE2O60344 883 aa8.36□□□□□ -1.07
CTDSPL-208ENST00000486978 MYL6BP14649 208 aa8.36□□□□□ -1.07
CTDSPL-208ENST00000486978 PRKG1Q13976 671 aa8.36□□□□□ -1.07
CTDSPL-208ENST00000486978 CCDC184Q52MB2 194 aa8.36□□□□□ -1.07
CTDSPL-208ENST00000486978 SLC10A5Q5PT55 438 aa8.36□□□□□ -1.07
CTDSPL-208ENST00000486978 SHISA4Q96DD7 197 aa8.36□□□□□ -1.07
CTDSPL-208ENST00000486978 LAS1LQ9Y4W2 734 aaKnown RBP8.36□□□□□ -1.07
CTDSPL-208ENST00000486978 ALPK3Q96L96 1907 aa8.36□□□□□ -1.07
CTDSPL-208ENST00000486978 IBTKQ9P2D0 1353 aaPredicted RBP8.35□□□□□ -1.07
CTDSPL-208ENST00000486978 DDX60Q8IY21 1712 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms