RNA–Protein interactions for RNA: ENST00000486506.5

MECP2-209, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 2,907 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-209ENST00000486506 KIF1BPQ96EK5 621 aa9.25□□□□□ -0.93
MECP2-209ENST00000486506 PDZRN3Q9UPQ7 1066 aa9.25□□□□□ -0.93
MECP2-209ENST00000486506 TNS2Q63HR2 1409 aa9.25□□□□□ -0.93
MECP2-209ENST00000486506 SLC4A2P04920 1241 aa9.25□□□□□ -0.93
MECP2-209ENST00000486506 PRIM1P49642 420 aaKnown RBP9.25□□□□□ -0.93
MECP2-209ENST00000486506 TMOD3Q9NYL9 352 aa9.25□□□□□ -0.93
MECP2-209ENST00000486506 GIGYF1O75420 1035 aaPredicted RBP9.24□□□□□ -0.93
MECP2-209ENST00000486506 ANXA1P04083 346 aa9.24□□□□□ -0.93
MECP2-209ENST00000486506 TRIM27P14373 513 aa9.24□□□□□ -0.93
MECP2-209ENST00000486506 HDGFL1Q5TGJ6 251 aa9.24□□□□□ -0.93
MECP2-209ENST00000486506 DNAJC14Q6Y2X3 702 aaPredicted RBP9.24□□□□□ -0.93
MECP2-209ENST00000486506 SRLQ86TD4 932 aa9.24□□□□□ -0.93
MECP2-209ENST00000486506 MRPL50Q8N5N7 158 aaKnown RBP9.24□□□□□ -0.93
MECP2-209ENST00000486506 PIGBQ92521 554 aa9.24□□□□□ -0.93
MECP2-209ENST00000486506 TEX13AQ9BXU3 409 aaPredicted RBP9.24□□□□□ -0.93
MECP2-209ENST00000486506 MAGEA9P43362 315 aa9.24□□□□□ -0.93
MECP2-209ENST00000486506 TEX35Q5T0J7 233 aa9.24□□□□□ -0.93
MECP2-209ENST00000486506 ZKSCAN2Q63HK3 967 aa9.24□□□□□ -0.93
MECP2-209ENST00000486506 ITPRIPQ8IWB1 547 aa9.24□□□□□ -0.93
MECP2-209ENST00000486506 SUDS3Q9H7L9 328 aaPredicted RBP9.24□□□□□ -0.93
MECP2-209ENST00000486506 C1orf115Q9H7X2 142 aa9.24□□□□□ -0.93
MECP2-209ENST00000486506 ASAP1Q9ULH1 1129 aa9.24□□□□□ -0.93
MECP2-209ENST00000486506 SOCS7O14512 581 aa9.23□□□□□ -0.93
MECP2-209ENST00000486506 ZNF397Q8NF99 534 aaPredicted RBP9.23□□□□□ -0.93
MECP2-209ENST00000486506 BAG4O95429 457 aaKnown RBP9.23□□□□□ -0.93
MECP2-209ENST00000486506 PIP4K2AP48426 406 aaPredicted RBP9.23□□□□□ -0.93
MECP2-209ENST00000486506 INHBEP58166 350 aa9.23□□□□□ -0.93
MECP2-209ENST00000486506 UVSSAQ2YD98 709 aa9.23□□□□□ -0.93
MECP2-209ENST00000486506 ATF7IPQ6VMQ6 1270 aa9.23□□□□□ -0.93
MECP2-209ENST00000486506 G2E3Q7L622 706 aa9.23□□□□□ -0.93
MECP2-209ENST00000486506 SHANK3Q9BYB0 1731 aa9.23□□□□□ -0.93
MECP2-209ENST00000486506 KCNQ2O43526 872 aa9.22□□□□□ -0.93
MECP2-209ENST00000486506 ERCC3P19447 782 aa9.22□□□□□ -0.93
MECP2-209ENST00000486506 PAX7P23759 505 aa9.22□□□□□ -0.93
MECP2-209ENST00000486506 CCT2P78371 535 aaKnown RBP9.22□□□□□ -0.93
MECP2-209ENST00000486506 CCDC30Q5VVM6 783 aa9.22□□□□□ -0.93
MECP2-209ENST00000486506 SEPT12Q8IYM1 358 aa9.22□□□□□ -0.93
MECP2-209ENST00000486506 ARHGEF1Q92888 912 aaKnown RBP9.22□□□□□ -0.93
MECP2-209ENST00000486506 STK31Q9BXU1 1019 aa9.22□□□□□ -0.93
MECP2-209ENST00000486506 SCN11AQ9UI33 1791 aa9.22□□□□□ -0.93
MECP2-209ENST00000486506 ANKRD18BA2A2Z9 1011 aa9.22□□□□□ -0.93
MECP2-209ENST00000486506 CHPF2Q9P2E5 772 aa9.22□□□□□ -0.93
MECP2-209ENST00000486506 USP16Q9Y5T5 823 aa9.22□□□□□ -0.93
MECP2-209ENST00000486506 ADAMTS7Q9UKP4 1686 aa9.22□□□□□ -0.93
MECP2-209ENST00000486506 SLC4A10Q6U841 1118 aa9.21□□□□□ -0.93
MECP2-209ENST00000486506 KRBA2Q6ZNG9 492 aa9.21□□□□□ -0.93
MECP2-209ENST00000486506 PACS2Q86VP3 889 aa9.21□□□□□ -0.93
MECP2-209ENST00000486506 DZIP1LQ8IYY4 767 aaKnown RBP9.21□□□□□ -0.93
MECP2-209ENST00000486506 MSL3Q8N5Y2 521 aaKnown RBP9.21□□□□□ -0.93
MECP2-209ENST00000486506 FMNL2Q96PY5 1086 aa9.21□□□□□ -0.93
MECP2-209ENST00000486506 SMC3Q9UQE7 1217 aa9.21□□□□□ -0.93
MECP2-209ENST00000486506 ATRNO75882 1429 aa9.21□□□□□ -0.93
MECP2-209ENST00000486506 F6X3S4 739 aa9.21□□□□□ -0.93
MECP2-209ENST00000486506 SSFA2P28290 1259 aa9.21□□□□□ -0.93
MECP2-209ENST00000486506 CAVIN1Q6NZI2 390 aaKnown RBP9.21□□□□□ -0.93
MECP2-209ENST00000486506 KLHL23Q8NBE8 558 aa9.21□□□□□ -0.93
MECP2-209ENST00000486506 RWDD1Q9H446 243 aaPredicted RBP9.21□□□□□ -0.93
MECP2-209ENST00000486506 PHAXQ9H814 394 aaKnown RBP9.21□□□□□ -0.93
MECP2-209ENST00000486506 ETAA1Q9NY74 926 aa9.21□□□□□ -0.93
MECP2-209ENST00000486506 RRP15Q9Y3B9 282 aaKnown RBP9.21□□□□□ -0.93
MECP2-209ENST00000486506 MRC1P22897 1456 aa9.21□□□□□ -0.94
MECP2-209ENST00000486506 HEG1Q9ULI3 1381 aa9.21□□□□□ -0.94
MECP2-209ENST00000486506 GLI3P10071 1580 aa9.21□□□□□ -0.94
MECP2-209ENST00000486506 MMS22LQ6ZRQ5 1243 aa9.21□□□□□ -0.94
MECP2-209ENST00000486506 PTF1AQ7RTS3 328 aa9.21□□□□□ -0.94
MECP2-209ENST00000486506 CCDC191Q8NCU4 936 aa9.21□□□□□ -0.94
MECP2-209ENST00000486506 RBM42Q9BTD8 480 aaKnown RBP9.21□□□□□ -0.94
MECP2-209ENST00000486506 SNRPA1P09661 255 aaKnown RBP9.2□□□□□ -0.94
MECP2-209ENST00000486506 POLD1P28340 1107 aa9.2□□□□□ -0.94
MECP2-209ENST00000486506 RBM5P52756 815 aaKnown RBP eCLIP9.2□□□□□ -0.94
MECP2-209ENST00000486506 GPS2Q13227 327 aa9.2□□□□□ -0.94
MECP2-209ENST00000486506 PROSER3Q2NL68 480 aa9.2□□□□□ -0.94
MECP2-209ENST00000486506 LRSAM1Q6UWE0 723 aa9.2□□□□□ -0.94
MECP2-209ENST00000486506 PPM1EQ8WY54 764 aa9.2□□□□□ -0.94
MECP2-209ENST00000486506 KDM4CQ9H3R0 1056 aa9.2□□□□□ -0.94
MECP2-209ENST00000486506 ONECUT3O60422 494 aaPredicted RBP9.2□□□□□ -0.94
MECP2-209ENST00000486506 HOXB7P09629 217 aa9.2□□□□□ -0.94
MECP2-209ENST00000486506 NUCB2P80303 420 aa9.2□□□□□ -0.94
MECP2-209ENST00000486506 E2F4Q16254 413 aa9.2□□□□□ -0.94
MECP2-209ENST00000486506 SLFNL1Q499Z3 407 aa9.2□□□□□ -0.94
MECP2-209ENST00000486506 TMEM57Q8N5G2 664 aa9.2□□□□□ -0.94
MECP2-209ENST00000486506 CCDC97Q96F63 343 aaPredicted RBP9.2□□□□□ -0.94
MECP2-209ENST00000486506 LMBRD1Q9NUN5 540 aa9.2□□□□□ -0.94
MECP2-209ENST00000486506 LCMT1Q9UIC8 334 aa9.2□□□□□ -0.94
MECP2-209ENST00000486506 APBB1O00213 710 aa9.19□□□□□ -0.94
MECP2-209ENST00000486506 C21orf2O43822 256 aa9.19□□□□□ -0.94
MECP2-209ENST00000486506 FLIIQ13045 1269 aa9.19□□□□□ -0.94
MECP2-209ENST00000486506 ZNF772Q68DY9 489 aaPredicted RBP9.19□□□□□ -0.94
MECP2-209ENST00000486506 TATDN2Q93075 761 aa9.19□□□□□ -0.94
MECP2-209ENST00000486506 BCL9O00512 1426 aa9.19□□□□□ -0.94
MECP2-209ENST00000486506 KDM3BQ7LBC6 1761 aa9.19□□□□□ -0.94
MECP2-209ENST00000486506 SMTNL1A8MU46 457 aa9.19□□□□□ -0.94
MECP2-209ENST00000486506 EIF3JO75822 258 aaKnown RBP9.19□□□□□ -0.94
MECP2-209ENST00000486506 MYL6BP14649 208 aa9.19□□□□□ -0.94
MECP2-209ENST00000486506 ADCY2Q08462 1091 aa9.19□□□□□ -0.94
MECP2-209ENST00000486506 ZRSR2Q15696 482 aaKnown RBP9.19□□□□□ -0.94
MECP2-209ENST00000486506 EXOC8Q8IYI6 725 aa9.19□□□□□ -0.94
MECP2-209ENST00000486506 IQUBQ8NA54 791 aa9.19□□□□□ -0.94
MECP2-209ENST00000486506 PIK3R5Q8WYR1 880 aa9.19□□□□□ -0.94
MECP2-209ENST00000486506 TOGARAM1Q9Y4F4 1720 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms