RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 JPH1Q9HDC5 661 aaPredicted RBP10.02□□□□□ -0.81
LTN1-206ENST00000486427 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.02□□□□□ -0.81
LTN1-206ENST00000486427 NID1P14543 1247 aa10.01□□□□□ -0.81
LTN1-206ENST00000486427 GJD3Q8N144 294 aa10.01□□□□□ -0.81
LTN1-206ENST00000486427 LILRB5O75023 590 aa10□□□□□ -0.81
LTN1-206ENST00000486427 GDF11O95390 407 aa10□□□□□ -0.81
LTN1-206ENST00000486427 EIF2AK2P19525 551 aaKnown RBP10□□□□□ -0.81
LTN1-206ENST00000486427 AFF1P51825 1210 aaKnown RBP10□□□□□ -0.81
LTN1-206ENST00000486427 PLVAPQ9BX97 442 aa10□□□□□ -0.81
LTN1-206ENST00000486427 FRRS1LQ9P0K9 344 aa10□□□□□ -0.81
LTN1-206ENST00000486427 IVNS1ABPQ9Y6Y0 642 aa10□□□□□ -0.81
LTN1-206ENST00000486427 RGS9O75916 674 aaPredicted RBP9.99□□□□□ -0.81
LTN1-206ENST00000486427 GRIK5Q16478 980 aa9.99□□□□□ -0.81
LTN1-206ENST00000486427 ELMSAN1Q6PJG2 1045 aa9.99□□□□□ -0.81
LTN1-206ENST00000486427 TMEM151AQ8N4L1 468 aa9.99□□□□□ -0.81
LTN1-206ENST00000486427 C1orf127Q8N9H9 656 aa9.99□□□□□ -0.81
LTN1-206ENST00000486427 TTC16Q8NEE8 873 aa9.99□□□□□ -0.81
LTN1-206ENST00000486427 SMG9Q9H0W8 520 aaKnown RBP9.99□□□□□ -0.81
LTN1-206ENST00000486427 CHRDQ9H2X0 955 aa9.99□□□□□ -0.81
LTN1-206ENST00000486427 USP5P45974 858 aa9.98□□□□□ -0.81
LTN1-206ENST00000486427 KCNA1Q09470 495 aa9.98□□□□□ -0.81
LTN1-206ENST00000486427 DCAF5Q96JK2 942 aa9.98□□□□□ -0.81
LTN1-206ENST00000486427 KANSL3Q9P2N6 904 aa9.98□□□□□ -0.81
LTN1-206ENST00000486427 BRPF3Q9ULD4 1205 aa9.98□□□□□ -0.81
LTN1-206ENST00000486427 PIK3R2O00459 728 aa9.97□□□□□ -0.81
LTN1-206ENST00000486427 HYAL2Q12891 473 aa9.97□□□□□ -0.81
LTN1-206ENST00000486427 SUZ12Q15022 739 aaKnown RBP9.97□□□□□ -0.81
LTN1-206ENST00000486427 PLD4Q96BZ4 506 aa9.97□□□□□ -0.81
LTN1-206ENST00000486427 FOXD3Q9UJU5 478 aaPredicted RBP9.97□□□□□ -0.81
LTN1-206ENST00000486427 TNFRSF21O75509 655 aa9.96□□□□□ -0.82
LTN1-206ENST00000486427 KIF4AO95239 1232 aa9.96□□□□□ -0.82
LTN1-206ENST00000486427 NOP53Q9NZM5 478 aaKnown RBP9.96□□□□□ -0.82
LTN1-206ENST00000486427 GHRHP01286 108 aa9.95□□□□□ -0.82
LTN1-206ENST00000486427 ATP11AP98196 1134 aa9.95□□□□□ -0.82
LTN1-206ENST00000486427 EHHADHQ08426 723 aa9.95□□□□□ -0.82
LTN1-206ENST00000486427 ILDR2Q71H61 639 aa9.95□□□□□ -0.82
LTN1-206ENST00000486427 TTC9Q92623 222 aa9.95□□□□□ -0.82
LTN1-206ENST00000486427 KRBA1A5PL33 1030 aa9.94□□□□□ -0.82
LTN1-206ENST00000486427 FAM229AH3BQW9 127 aa9.94□□□□□ -0.82
LTN1-206ENST00000486427 NDUFB5O43674 189 aa9.94□□□□□ -0.82
LTN1-206ENST00000486427 PDIA4P13667 645 aaKnown RBP9.94□□□□□ -0.82
LTN1-206ENST00000486427 CES1P23141 567 aa9.94□□□□□ -0.82
LTN1-206ENST00000486427 BIN2Q9UBW5 565 aaPredicted RBP9.94□□□□□ -0.82
LTN1-206ENST00000486427 SALL4Q9UJQ4 1053 aa9.94□□□□□ -0.82
LTN1-206ENST00000486427 EREGO14944 169 aa9.93□□□□□ -0.82
LTN1-206ENST00000486427 ACPPP15309 386 aa9.93□□□□□ -0.82
LTN1-206ENST00000486427 NCAPG2Q86XI2 1143 aa9.93□□□□□ -0.82
LTN1-206ENST00000486427 KCTD17Q8N5Z5 321 aa9.93□□□□□ -0.82
LTN1-206ENST00000486427 CEP120Q8N960 986 aa9.93□□□□□ -0.82
LTN1-206ENST00000486427 SNX29Q8TEQ0 813 aa9.93□□□□□ -0.82
LTN1-206ENST00000486427 FAM129BQ96TA1 746 aa9.93□□□□□ -0.82
LTN1-206ENST00000486427 TRIM33Q9UPN9 1127 aa9.93□□□□□ -0.82
LTN1-206ENST00000486427 PHACTR2O75167 634 aa9.92□□□□□ -0.82
LTN1-206ENST00000486427 IGHA2P01877 340 aa9.92□□□□□ -0.82
LTN1-206ENST00000486427 ITGB2P05107 769 aa9.92□□□□□ -0.82
LTN1-206ENST00000486427 TRAPPC3LQ5T215 181 aa9.92□□□□□ -0.82
LTN1-206ENST00000486427 MSL1Q68DK7 614 aa9.92□□□□□ -0.82
LTN1-206ENST00000486427 DMRTC2Q8IXT2 367 aaPredicted RBP9.92□□□□□ -0.82
LTN1-206ENST00000486427 RBSNQ9H1K0 784 aa9.92□□□□□ -0.82
LTN1-206ENST00000486427 RASSF4Q9H2L5 321 aa9.92□□□□□ -0.82
LTN1-206ENST00000486427 BAG6P46379 1132 aa9.91□□□□□ -0.82
LTN1-206ENST00000486427 ADAMTSL4Q6UY14 1074 aa9.91□□□□□ -0.82
LTN1-206ENST00000486427 SPACA7Q96KW9 195 aa9.91□□□□□ -0.82
LTN1-206ENST00000486427 GPR182O15218 404 aa9.9□□□□□ -0.82
LTN1-206ENST00000486427 GDF6Q6KF10 455 aaPredicted RBP9.9□□□□□ -0.82
LTN1-206ENST00000486427 ALYREFQ86V81 257 aaKnown RBP9.9□□□□□ -0.82
LTN1-206ENST00000486427 AEBP1Q8IUX7 1158 aa9.9□□□□□ -0.82
LTN1-206ENST00000486427 ZFYVE28Q9HCC9 887 aa9.9□□□□□ -0.82
LTN1-206ENST00000486427 A0A0A0MRY4 1105 aa9.89□□□□□ -0.83
LTN1-206ENST00000486427 SPDYE3A6NKU9 549 aa9.89□□□□□ -0.83
LTN1-206ENST00000486427 TRPA1O75762 1119 aa9.89□□□□□ -0.83
LTN1-206ENST00000486427 PLA2G4EQ3MJ16 856 aa9.89□□□□□ -0.83
LTN1-206ENST00000486427 CEP135Q66GS9 1140 aa9.89□□□□□ -0.83
LTN1-206ENST00000486427 WFDC8Q8IUA0 241 aa9.89□□□□□ -0.83
LTN1-206ENST00000486427 PMEPA1Q969W9 287 aa9.89□□□□□ -0.83
LTN1-206ENST00000486427 CITED4Q96RK1 184 aa9.89□□□□□ -0.83
LTN1-206ENST00000486427 PBX4Q9BYU1 374 aa9.89□□□□□ -0.83
LTN1-206ENST00000486427 POLR3DP05423 398 aaPredicted RBP9.88□□□□□ -0.83
LTN1-206ENST00000486427 SPATA31C1P0DKV0 1188 aa9.88□□□□□ -0.83
LTN1-206ENST00000486427 PRRT3Q5FWE3 981 aa9.88□□□□□ -0.83
LTN1-206ENST00000486427 HHIPQ96QV1 700 aa9.88□□□□□ -0.83
LTN1-206ENST00000486427 RBCK1Q9BYM8 510 aa9.88□□□□□ -0.83
LTN1-206ENST00000486427 NFKBIEO00221 500 aa9.87□□□□□ -0.83
LTN1-206ENST00000486427 TRIM28Q13263 835 aaKnown RBP9.87□□□□□ -0.83
LTN1-206ENST00000486427 PDE3BQ13370 1112 aa9.87□□□□□ -0.83
LTN1-206ENST00000486427 ORC1Q13415 861 aa9.87□□□□□ -0.83
LTN1-206ENST00000486427 USPL1Q5W0Q7 1092 aa9.87□□□□□ -0.83
LTN1-206ENST00000486427 IL22RA1Q8N6P7 574 aa9.87□□□□□ -0.83
LTN1-206ENST00000486427 TMC1Q8TDI8 760 aa9.87□□□□□ -0.83
LTN1-206ENST00000486427 LATS2Q9NRM7 1088 aa9.87□□□□□ -0.83
LTN1-206ENST00000486427 DZANK1Q9NVP4 752 aa9.87□□□□□ -0.83
LTN1-206ENST00000486427 DCTN4Q9UJW0 460 aa9.87□□□□□ -0.83
LTN1-206ENST00000486427 SMNDC1O75940 238 aaKnown RBP eCLIP9.86□□□□□ -0.83
LTN1-206ENST00000486427 GRIK4Q16099 956 aa9.86□□□□□ -0.83
LTN1-206ENST00000486427 TMC7Q7Z402 723 aa9.86□□□□□ -0.83
LTN1-206ENST00000486427 POP1Q99575 1024 aaKnown RBP9.86□□□□□ -0.83
LTN1-206ENST00000486427 NIF3L1Q9GZT8 377 aa9.86□□□□□ -0.83
LTN1-206ENST00000486427 LACRTQ9GZZ8 138 aa9.86□□□□□ -0.83
LTN1-206ENST00000486427 AMOTL2Q9Y2J4 779 aa9.86□□□□□ -0.83
LTN1-206ENST00000486427 CHRNA4P43681 627 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 146.9 ms