RNA–Protein interactions for RNA: ENST00000486239.1

DCLK1-207, Transcript of doublecortin like kinase 1, humanhuman

TSL 3

Gene DCLK1, Length 578 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-207ENST00000486239 UBE3BQ7Z3V4 1068 aa17.35■□□□□ 0.37
DCLK1-207ENST00000486239 SLC51AQ86UW1 340 aa17.35■□□□□ 0.37
DCLK1-207ENST00000486239 TTLL11Q8NHH1 800 aa17.35■□□□□ 0.37
DCLK1-207ENST00000486239 SEC31BQ9NQW1 1179 aa17.35■□□□□ 0.37
DCLK1-207ENST00000486239 POLLQ9UGP5 575 aa17.35■□□□□ 0.37
DCLK1-207ENST00000486239 CNTNAP1P78357 1384 aa17.35■□□□□ 0.37
DCLK1-207ENST00000486239 SPEF2Q9C093 1822 aa17.35■□□□□ 0.37
DCLK1-207ENST00000486239 UFL1O94874 794 aa17.34■□□□□ 0.37
DCLK1-207ENST00000486239 COL4A1P02462 1669 aa17.34■□□□□ 0.37
DCLK1-207ENST00000486239 ATP2B4P23634 1241 aa17.34■□□□□ 0.37
DCLK1-207ENST00000486239 ZNF521Q96K83 1311 aa17.34■□□□□ 0.37
DCLK1-207ENST00000486239 BSDC1Q9NW68 430 aaPredicted RBP17.34■□□□□ 0.37
DCLK1-207ENST00000486239 E9PSI1 815 aa17.33■□□□□ 0.36
DCLK1-207ENST00000486239 ECE2O60344 883 aa17.33■□□□□ 0.36
DCLK1-207ENST00000486239 RAD17O75943 681 aa17.33■□□□□ 0.36
DCLK1-207ENST00000486239 IGHMBP2P38935 993 aaKnown RBP17.33■□□□□ 0.36
DCLK1-207ENST00000486239 MAP1SQ66K74 1059 aaPredicted RBP17.33■□□□□ 0.36
DCLK1-207ENST00000486239 MED23Q9ULK4 1368 aa17.32■□□□□ 0.36
DCLK1-207ENST00000486239 YDJCA8MPS7 323 aa17.32■□□□□ 0.36
DCLK1-207ENST00000486239 DBNDD1Q9H9R9 158 aa17.32■□□□□ 0.36
DCLK1-207ENST00000486239 CCER2I3L3R5 266 aa17.31■□□□□ 0.36
DCLK1-207ENST00000486239 RIMBP2O15034 1052 aa17.31■□□□□ 0.36
DCLK1-207ENST00000486239 ANKRD2Q9GZV1 360 aa17.31■□□□□ 0.36
DCLK1-207ENST00000486239 GREM2Q9H772 168 aa17.31■□□□□ 0.36
DCLK1-207ENST00000486239 PODNQ7Z5L7 613 aa17.3■□□□□ 0.36
DCLK1-207ENST00000486239 CCDC85AQ96PX6 553 aaPredicted RBP17.3■□□□□ 0.36
DCLK1-207ENST00000486239 MPHOSPH8Q99549 860 aa17.3■□□□□ 0.36
DCLK1-207ENST00000486239 SPINK5Q9NQ38 1064 aaPredicted RBP17.3■□□□□ 0.36
DCLK1-207ENST00000486239 PGAP2Q9UHJ9 254 aa17.3■□□□□ 0.36
DCLK1-207ENST00000486239 CNOT7Q9UIV1 285 aaKnown RBP17.3■□□□□ 0.36
DCLK1-207ENST00000486239 RASSF10A6NK89 507 aa17.29■□□□□ 0.36
DCLK1-207ENST00000486239 PSMD14O00487 310 aa17.29■□□□□ 0.36
DCLK1-207ENST00000486239 ALDH1L1O75891 902 aa17.29■□□□□ 0.36
DCLK1-207ENST00000486239 CSF1RP07333 972 aa17.29■□□□□ 0.36
DCLK1-207ENST00000486239 MMP14P50281 582 aa17.29■□□□□ 0.36
DCLK1-207ENST00000486239 CASP7P55210 303 aa17.29■□□□□ 0.36
DCLK1-207ENST00000486239 MICALL2Q8IY33 904 aa17.29■□□□□ 0.36
DCLK1-207ENST00000486239 JARID2Q92833 1246 aaPredicted RBP17.29■□□□□ 0.36
DCLK1-207ENST00000486239 LEMD3Q9Y2U8 911 aa17.29■□□□□ 0.36
DCLK1-207ENST00000486239 SCN9AQ15858 1988 aa17.29■□□□□ 0.36
DCLK1-207ENST00000486239 PTPRCP08575 1304 aa17.28■□□□□ 0.36
DCLK1-207ENST00000486239 ANKRD18BA2A2Z9 1011 aa17.28■□□□□ 0.36
DCLK1-207ENST00000486239 ITGA6P23229 1130 aa17.28■□□□□ 0.36
DCLK1-207ENST00000486239 BEND3Q5T5X7 828 aa17.28■□□□□ 0.36
DCLK1-207ENST00000486239 AGBL3Q8NEM8 1001 aa17.28■□□□□ 0.36
DCLK1-207ENST00000486239 MKRN1Q9UHC7 482 aaKnown RBP17.28■□□□□ 0.36
DCLK1-207ENST00000486239 MINPP1Q9UNW1 487 aa17.28■□□□□ 0.36
DCLK1-207ENST00000486239 MYO3BQ8WXR4 1341 aa17.27■□□□□ 0.36
DCLK1-207ENST00000486239 GRM8O00222 908 aa17.27■□□□□ 0.36
DCLK1-207ENST00000486239 VIL1P09327 827 aaKnown RBP17.27■□□□□ 0.36
DCLK1-207ENST00000486239 CCT4P50991 539 aaKnown RBP17.27■□□□□ 0.36
DCLK1-207ENST00000486239 DOK7Q18PE1 504 aa17.27■□□□□ 0.36
DCLK1-207ENST00000486239 FAM161AQ3B820 660 aa17.27■□□□□ 0.36
DCLK1-207ENST00000486239 CDC37L1Q7L3B6 337 aa17.27■□□□□ 0.36
DCLK1-207ENST00000486239 ABT1Q9ULW3 272 aaKnown RBP17.27■□□□□ 0.36
DCLK1-207ENST00000486239 THSD7BQ9C0I4 1608 aa17.26■□□□□ 0.35
DCLK1-207ENST00000486239 CT47B1P0C2W7 299 aaPredicted RBP17.26■□□□□ 0.35
DCLK1-207ENST00000486239 ECE1P42892 770 aa17.26■□□□□ 0.35
DCLK1-207ENST00000486239 IFIT5Q13325 482 aaKnown RBP17.26■□□□□ 0.35
DCLK1-207ENST00000486239 DEFB115Q30KQ5 88 aa17.26■□□□□ 0.35
DCLK1-207ENST00000486239 SRCIN1Q9C0H9 1055 aa17.26■□□□□ 0.35
DCLK1-207ENST00000486239 C9orf78Q9NZ63 289 aaPredicted RBP17.26■□□□□ 0.35
DCLK1-207ENST00000486239 HSPA1AP0DMV8 641 aaKnown RBP17.25■□□□□ 0.35
DCLK1-207ENST00000486239 HSPA1BP0DMV9 641 aaKnown RBP17.25■□□□□ 0.35
DCLK1-207ENST00000486239 RSBN1LQ6PCB5 846 aaPredicted RBP17.25■□□□□ 0.35
DCLK1-207ENST00000486239 COA1Q9GZY4 146 aa17.25■□□□□ 0.35
DCLK1-207ENST00000486239 A0A1B0GUL6 1792 aa17.25■□□□□ 0.35
DCLK1-207ENST00000486239 USP17L3A6NCW0 530 aa17.24■□□□□ 0.35
DCLK1-207ENST00000486239 USP17L4A6NCW7 530 aa17.24■□□□□ 0.35
DCLK1-207ENST00000486239 F6X3S4 739 aa17.24■□□□□ 0.35
DCLK1-207ENST00000486239 KCNJ4P48050 445 aa17.24■□□□□ 0.35
DCLK1-207ENST00000486239 ALDH1L2Q3SY69 923 aa17.24■□□□□ 0.35
DCLK1-207ENST00000486239 IFFO2Q5TF58 517 aa17.24■□□□□ 0.35
DCLK1-207ENST00000486239 USP17L1Q7RTZ2 530 aa17.24■□□□□ 0.35
DCLK1-207ENST00000486239 TRPM4Q8TD43 1214 aa17.24■□□□□ 0.35
DCLK1-207ENST00000486239 AIDAQ96BJ3 306 aa17.24■□□□□ 0.35
DCLK1-207ENST00000486239 HHIPL1Q96JK4 782 aa17.24■□□□□ 0.35
DCLK1-207ENST00000486239 ZBTB12Q9Y330 459 aaPredicted RBP17.24■□□□□ 0.35
DCLK1-207ENST00000486239 ZNF804BA4D1E1 1349 aa17.23■□□□□ 0.35
DCLK1-207ENST00000486239 CCDC57Q2TAC2 916 aa17.23■□□□□ 0.35
DCLK1-207ENST00000486239 SLC4A10Q6U841 1118 aa17.23■□□□□ 0.35
DCLK1-207ENST00000486239 GPR101Q96P66 508 aaPredicted RBP17.23■□□□□ 0.35
DCLK1-207ENST00000486239 TLL2Q9Y6L7 1015 aa17.23■□□□□ 0.35
DCLK1-207ENST00000486239 VEGFBP49765 207 aa17.22■□□□□ 0.35
DCLK1-207ENST00000486239 ZNF280AP59817 542 aaPredicted RBP17.22■□□□□ 0.35
DCLK1-207ENST00000486239 MAP2K1Q02750 393 aaPredicted RBP17.22■□□□□ 0.35
DCLK1-207ENST00000486239 SLFN5Q08AF3 891 aa17.22■□□□□ 0.35
DCLK1-207ENST00000486239 KIF4BQ2VIQ3 1234 aa17.22■□□□□ 0.35
DCLK1-207ENST00000486239 TAF7LQ5H9L4 462 aa17.22■□□□□ 0.35
DCLK1-207ENST00000486239 DCPSQ96C86 337 aaKnown RBP17.22■□□□□ 0.35
DCLK1-207ENST00000486239 CHMP3Q9Y3E7 222 aa17.22■□□□□ 0.35
DCLK1-207ENST00000486239 HIRAP54198 1017 aaPredicted RBP17.21■□□□□ 0.35
DCLK1-207ENST00000486239 FOXO4P98177 505 aa17.21■□□□□ 0.35
DCLK1-207ENST00000486239 STRIP1Q5VSL9 837 aa17.21■□□□□ 0.35
DCLK1-207ENST00000486239 OGFOD1Q8N543 542 aa17.21■□□□□ 0.35
DCLK1-207ENST00000486239 GLIS2Q9BZE0 524 aaPredicted RBP17.21■□□□□ 0.35
DCLK1-207ENST00000486239 UTYO14607 1347 aa17.21■□□□□ 0.34
DCLK1-207ENST00000486239 WDR33Q9C0J8 1336 aaKnown RBP17.21■□□□□ 0.34
DCLK1-207ENST00000486239 ZNF646O15015 1829 aaPredicted RBP17.2■□□□□ 0.34
DCLK1-207ENST00000486239 CELF2O95319 508 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms