RNA–Protein interactions for RNA: ENST00000486148.1

TNXB-205, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-205ENST00000486148 TMEM94Q12767 1356 aa20.76■□□□□ 0.91
TNXB-205ENST00000486148 CAMK4Q16566 473 aa20.76■□□□□ 0.91
TNXB-205ENST00000486148 TSC1Q92574 1164 aa20.75■□□□□ 0.91
TNXB-205ENST00000486148 CCDC192P0DO97 292 aa20.75■□□□□ 0.91
TNXB-205ENST00000486148 LRRC2Q9BYS8 371 aa20.75■□□□□ 0.91
TNXB-205ENST00000486148 H7C1W4 665 aa20.74■□□□□ 0.91
TNXB-205ENST00000486148 STOX1Q6ZVD7 989 aa20.74■□□□□ 0.91
TNXB-205ENST00000486148 ATG9AQ7Z3C6 839 aa20.74■□□□□ 0.91
TNXB-205ENST00000486148 ZNF710Q8N1W2 664 aa20.74■□□□□ 0.91
TNXB-205ENST00000486148 KBTBD3Q8NAB2 608 aa20.74■□□□□ 0.91
TNXB-205ENST00000486148 LEO1Q8WVC0 666 aaPredicted RBP20.74■□□□□ 0.91
TNXB-205ENST00000486148 SPATA32Q96LK8 384 aa20.74■□□□□ 0.91
TNXB-205ENST00000486148 NUP62CLQ9H1M0 184 aa20.74■□□□□ 0.91
TNXB-205ENST00000486148 LAMB4A4D0S4 1761 aa20.74■□□□□ 0.91
TNXB-205ENST00000486148 TTLL7Q6ZT98 887 aa20.74■□□□□ 0.91
TNXB-205ENST00000486148 SCAND2PQ9GZW5 306 aaPredicted RBP20.74■□□□□ 0.91
TNXB-205ENST00000486148 MAP3K11Q16584 847 aa20.73■□□□□ 0.91
TNXB-205ENST00000486148 TNS3Q68CZ2 1445 aa20.73■□□□□ 0.91
TNXB-205ENST00000486148 HSP90B1P14625 803 aaKnown RBP20.73■□□□□ 0.91
TNXB-205ENST00000486148 C17orf53Q8N3J3 647 aaPredicted RBP20.73■□□□□ 0.91
TNXB-205ENST00000486148 PIBF1Q8WXW3 757 aa20.73■□□□□ 0.91
TNXB-205ENST00000486148 BRF1Q92994 677 aa20.73■□□□□ 0.91
TNXB-205ENST00000486148 NEUROD6Q96NK8 337 aa20.73■□□□□ 0.91
TNXB-205ENST00000486148 DACT1Q9NYF0 836 aa20.73■□□□□ 0.91
TNXB-205ENST00000486148 GOLIM4O00461 696 aa20.72■□□□□ 0.91
TNXB-205ENST00000486148 TIMM10P62072 90 aa20.72■□□□□ 0.91
TNXB-205ENST00000486148 DDX11Q96FC9 970 aa20.72■□□□□ 0.91
TNXB-205ENST00000486148 MRVI1Q9Y6F6 885 aa20.72■□□□□ 0.91
TNXB-205ENST00000486148 SH3TC1Q8TE82 1336 aa20.72■□□□□ 0.91
TNXB-205ENST00000486148 PLEKHG2Q9H7P9 1386 aa20.72■□□□□ 0.91
TNXB-205ENST00000486148 RESTQ13127 1097 aa20.71■□□□□ 0.91
TNXB-205ENST00000486148 CKAP2LQ8IYA6 745 aa20.71■□□□□ 0.91
TNXB-205ENST00000486148 MYRIPQ8NFW9 859 aa20.71■□□□□ 0.91
TNXB-205ENST00000486148 TYRO3Q06418 890 aa20.71■□□□□ 0.91
TNXB-205ENST00000486148 SCRN1Q12765 414 aa20.71■□□□□ 0.91
TNXB-205ENST00000486148 GOLGA6L4A6NEF3 574 aa20.71■□□□□ 0.91
TNXB-205ENST00000486148 NOLC1Q14978 699 aaKnown RBP eCLIP20.71■□□□□ 0.91
TNXB-205ENST00000486148 PGBD1Q96JS3 809 aa20.71■□□□□ 0.91
TNXB-205ENST00000486148 PAG1Q9NWQ8 432 aa20.71■□□□□ 0.91
TNXB-205ENST00000486148 PALLDQ8WX93 1383 aa20.7■□□□□ 0.9
TNXB-205ENST00000486148 CBX1P83916 185 aa20.7■□□□□ 0.9
TNXB-205ENST00000486148 TNMDQ9H2S6 317 aa20.7■□□□□ 0.9
TNXB-205ENST00000486148 CWC25Q9NXE8 425 aaPredicted RBP20.7■□□□□ 0.9
TNXB-205ENST00000486148 A0A0G2JLW4 131 aa20.7■□□□□ 0.9
TNXB-205ENST00000486148 A1BGP04217 495 aa20.7■□□□□ 0.9
TNXB-205ENST00000486148 FAM200AQ8TCP9 573 aa20.7■□□□□ 0.9
TNXB-205ENST00000486148 STRCP1A6NGW2 1772 aa20.69■□□□□ 0.9
TNXB-205ENST00000486148 LRRC24Q50LG9 513 aa20.69■□□□□ 0.9
TNXB-205ENST00000486148 ZNF594Q96JF6 807 aaPredicted RBP20.69■□□□□ 0.9
TNXB-205ENST00000486148 LAMA4Q16363 1823 aa20.69■□□□□ 0.9
TNXB-205ENST00000486148 TJP1Q07157 1748 aa20.69■□□□□ 0.9
TNXB-205ENST00000486148 SPATA31A3Q5VYP0 1347 aa20.69■□□□□ 0.9
TNXB-205ENST00000486148 PARP4Q9UKK3 1724 aaKnown RBP20.68■□□□□ 0.9
TNXB-205ENST00000486148 LUZP1Q86V48 1076 aa20.68■□□□□ 0.9
TNXB-205ENST00000486148 ZBTB3Q9H5J0 574 aa20.68■□□□□ 0.9
TNXB-205ENST00000486148 NUP188Q5SRE5 1749 aa20.68■□□□□ 0.9
TNXB-205ENST00000486148 NR1I2O75469 434 aa20.68■□□□□ 0.9
TNXB-205ENST00000486148 PPP4R3BQ5MIZ7 849 aa20.68■□□□□ 0.9
TNXB-205ENST00000486148 DNTTIP2Q5QJE6 756 aaKnown RBP20.68■□□□□ 0.9
TNXB-205ENST00000486148 SPC24Q8NBT2 197 aa20.68■□□□□ 0.9
TNXB-205ENST00000486148 KCNF1Q9H3M0 494 aa20.68■□□□□ 0.9
TNXB-205ENST00000486148 H3BQV1 296 aa20.67■□□□□ 0.9
TNXB-205ENST00000486148 ATP2B3Q16720 1220 aa20.67■□□□□ 0.9
TNXB-205ENST00000486148 IFFO2Q5TF58 517 aa20.67■□□□□ 0.9
TNXB-205ENST00000486148 SMARCC2Q8TAQ2 1214 aa20.67■□□□□ 0.9
TNXB-205ENST00000486148 CLSTN2Q9H4D0 955 aa20.67■□□□□ 0.9
TNXB-205ENST00000486148 HELLSQ9NRZ9 838 aa20.67■□□□□ 0.9
TNXB-205ENST00000486148 DDX19AQ9NUU7 478 aaKnown RBP20.67■□□□□ 0.9
TNXB-205ENST00000486148 CPDO75976 1380 aa20.67■□□□□ 0.9
TNXB-205ENST00000486148 PFKFB2O60825 505 aa20.67■□□□□ 0.9
TNXB-205ENST00000486148 IL15P40933 162 aaPredicted RBP20.67■□□□□ 0.9
TNXB-205ENST00000486148 ZMYM1Q5SVZ6 1142 aa20.67■□□□□ 0.9
TNXB-205ENST00000486148 DHX32Q7L7V1 743 aaKnown RBP20.67■□□□□ 0.9
TNXB-205ENST00000486148 DCCP43146 1447 aa20.67■□□□□ 0.9
TNXB-205ENST00000486148 APOBRQ0VD83 1088 aa20.66■□□□□ 0.9
TNXB-205ENST00000486148 ANO6Q4KMQ2 910 aa20.66■□□□□ 0.9
TNXB-205ENST00000486148 RBM43Q6ZSC3 357 aaKnown RBP20.66■□□□□ 0.9
TNXB-205ENST00000486148 BICD2Q8TD16 824 aa20.66■□□□□ 0.9
TNXB-205ENST00000486148 GPR108Q9NPR9 543 aa20.66■□□□□ 0.9
TNXB-205ENST00000486148 CTDNEP1O95476 244 aa20.66■□□□□ 0.9
TNXB-205ENST00000486148 NSUN7Q8NE18 718 aaKnown RBP20.66■□□□□ 0.9
TNXB-205ENST00000486148 DSCC1Q9BVC3 393 aa20.66■□□□□ 0.9
TNXB-205ENST00000486148 EYA2O00167 538 aa20.65■□□□□ 0.9
TNXB-205ENST00000486148 FOSBP53539 338 aa20.65■□□□□ 0.9
TNXB-205ENST00000486148 ZCRB1Q8TBF4 217 aaKnown RBP20.65■□□□□ 0.9
TNXB-205ENST00000486148 PUS3Q9BZE2 481 aaKnown RBP20.65■□□□□ 0.9
TNXB-205ENST00000486148 GTPBP4Q9BZE4 634 aaKnown RBP20.65■□□□□ 0.9
TNXB-205ENST00000486148 HMGB1P09429 215 aaKnown RBP20.65■□□□□ 0.9
TNXB-205ENST00000486148 HSPD1P10809 573 aaKnown RBP20.65■□□□□ 0.9
TNXB-205ENST00000486148 GTF2E1P29083 439 aaPredicted RBP20.65■□□□□ 0.9
TNXB-205ENST00000486148 EXOSC10Q01780 885 aaKnown RBP20.65■□□□□ 0.9
TNXB-205ENST00000486148 CBX8Q9HC52 389 aa20.65■□□□□ 0.9
TNXB-205ENST00000486148 SPTLC3Q9NUV7 552 aa20.65■□□□□ 0.9
TNXB-205ENST00000486148 MAST3O60307 1309 aa20.64■□□□□ 0.9
TNXB-205ENST00000486148 FAM177BA6PVY3 158 aa20.64■□□□□ 0.9
TNXB-205ENST00000486148 BBXQ8WY36 941 aaPredicted RBP20.64■□□□□ 0.9
TNXB-205ENST00000486148 KCPQ6ZWJ8 1503 aa20.64■□□□□ 0.9
TNXB-205ENST00000486148 PCDH11XQ9BZA7 1347 aa20.64■□□□□ 0.89
TNXB-205ENST00000486148 PCDH11YQ9BZA8 1340 aa20.64■□□□□ 0.89
TNXB-205ENST00000486148 A0A1B0GUL7 405 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms