RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.72□□□□□ -0.85
SMC4-217ENST00000485867 TMEM259Q4ZIN3 620 aa9.72□□□□□ -0.85
SMC4-217ENST00000485867 POLD1P28340 1107 aa9.71□□□□□ -0.86
SMC4-217ENST00000485867 IL27Q8NEV9 243 aa9.71□□□□□ -0.86
SMC4-217ENST00000485867 CDK19Q9BWU1 502 aa9.71□□□□□ -0.86
SMC4-217ENST00000485867 BRD4O60885 1362 aaPredicted RBP9.71□□□□□ -0.86
SMC4-217ENST00000485867 ESPNB1AK53 854 aa9.7□□□□□ -0.86
SMC4-217ENST00000485867 AGBL1Q96MI9 1066 aa9.7□□□□□ -0.86
SMC4-217ENST00000485867 CARD10Q9BWT7 1032 aa9.7□□□□□ -0.86
SMC4-217ENST00000485867 TMPRSS4Q9NRS4 437 aa9.7□□□□□ -0.86
SMC4-217ENST00000485867 LRRC4BQ9NT99 713 aa9.7□□□□□ -0.86
SMC4-217ENST00000485867 USP6P35125 1406 aa9.7□□□□□ -0.86
SMC4-217ENST00000485867 CPSF1Q10570 1443 aaKnown RBP9.7□□□□□ -0.86
SMC4-217ENST00000485867 FAM181BA6NEQ2 426 aa9.69□□□□□ -0.86
SMC4-217ENST00000485867 EXOC5O00471 708 aa9.69□□□□□ -0.86
SMC4-217ENST00000485867 PTSQ03393 145 aa9.69□□□□□ -0.86
SMC4-217ENST00000485867 PNPLA7Q6ZV29 1317 aa9.69□□□□□ -0.86
SMC4-217ENST00000485867 DZIP3Q86Y13 1208 aaKnown RBP9.69□□□□□ -0.86
SMC4-217ENST00000485867 ACSBG1Q96GR2 724 aa9.69□□□□□ -0.86
SMC4-217ENST00000485867 QRICH2Q9H0J4 1663 aa9.69□□□□□ -0.86
SMC4-217ENST00000485867 PPIP5K1Q6PFW1 1433 aa9.68□□□□□ -0.86
SMC4-217ENST00000485867 CCDC7Q96M83 1385 aa9.68□□□□□ -0.86
SMC4-217ENST00000485867 FIGNL2A6NMB9 653 aa9.68□□□□□ -0.86
SMC4-217ENST00000485867 BRPF1P55201 1214 aaPredicted RBP9.68□□□□□ -0.86
SMC4-217ENST00000485867 RELBQ01201 579 aa9.68□□□□□ -0.86
SMC4-217ENST00000485867 ZNF526Q8TF50 670 aaPredicted RBP9.68□□□□□ -0.86
SMC4-217ENST00000485867 LY75O60449 1722 aa9.68□□□□□ -0.86
SMC4-217ENST00000485867 ERVH48-1M5A8F1 160 aa9.67□□□□□ -0.86
SMC4-217ENST00000485867 LILRA1O75019 489 aa9.67□□□□□ -0.86
SMC4-217ENST00000485867 CTSOP43234 321 aaPredicted RBP9.67□□□□□ -0.86
SMC4-217ENST00000485867 WDR90Q96KV7 1748 aa9.67□□□□□ -0.86
SMC4-217ENST00000485867 ADD1P35611 737 aaKnown RBP9.66□□□□□ -0.86
SMC4-217ENST00000485867 RAB15P59190 212 aa9.66□□□□□ -0.86
SMC4-217ENST00000485867 INSM2Q96T92 566 aaPredicted RBP9.66□□□□□ -0.86
SMC4-217ENST00000485867 NFAT5O94916 1531 aa9.66□□□□□ -0.86
SMC4-217ENST00000485867 ADH1AP07327 375 aa9.65□□□□□ -0.86
SMC4-217ENST00000485867 CSB-PGBD3P0DP91 1061 aa9.65□□□□□ -0.86
SMC4-217ENST00000485867 ARHGEF25Q86VW2 580 aa9.65□□□□□ -0.86
SMC4-217ENST00000485867 DNAJC5GQ8N7S2 189 aa9.65□□□□□ -0.86
SMC4-217ENST00000485867 KDF1Q8NAX2 398 aaPredicted RBP9.65□□□□□ -0.86
SMC4-217ENST00000485867 KIAA1210Q9ULL0 1709 aa9.65□□□□□ -0.87
SMC4-217ENST00000485867 ZBBXA8MT70 800 aa9.64□□□□□ -0.87
SMC4-217ENST00000485867 SLC27A3Q5K4L6 730 aa9.64□□□□□ -0.87
SMC4-217ENST00000485867 COL13A1Q5TAT6 717 aaPredicted RBP9.64□□□□□ -0.87
SMC4-217ENST00000485867 CCDC155Q8N6L0 562 aa9.64□□□□□ -0.87
SMC4-217ENST00000485867 ZNF395Q9H8N7 513 aaPredicted RBP9.64□□□□□ -0.87
SMC4-217ENST00000485867 TFCP2L1Q9NZI6 479 aa9.64□□□□□ -0.87
SMC4-217ENST00000485867 DOT1LQ8TEK3 1739 aa9.63□□□□□ -0.87
SMC4-217ENST00000485867 SLC35F4A4IF30 521 aa9.63□□□□□ -0.87
SMC4-217ENST00000485867 FBXO45P0C2W1 286 aa9.63□□□□□ -0.87
SMC4-217ENST00000485867 GPR161Q8N6U8 529 aaKnown RBP9.63□□□□□ -0.87
SMC4-217ENST00000485867 RNF217Q8TC41 542 aa9.63□□□□□ -0.87
SMC4-217ENST00000485867 DCAF11Q8TEB1 546 aa9.63□□□□□ -0.87
SMC4-217ENST00000485867 KRT76Q01546 638 aa9.62□□□□□ -0.87
SMC4-217ENST00000485867 NANOS1Q8WY41 292 aaKnown RBP9.62□□□□□ -0.87
SMC4-217ENST00000485867 POLMQ9NP87 494 aaPredicted RBP9.62□□□□□ -0.87
SMC4-217ENST00000485867 CICQ96RK0 1608 aaPredicted RBP9.62□□□□□ -0.87
SMC4-217ENST00000485867 LTN1O94822 1766 aa9.62□□□□□ -0.87
SMC4-217ENST00000485867 PTGIRP43119 386 aa9.61□□□□□ -0.87
SMC4-217ENST00000485867 PRELPP51888 382 aa9.61□□□□□ -0.87
SMC4-217ENST00000485867 KCNQ4P56696 695 aa9.61□□□□□ -0.87
SMC4-217ENST00000485867 SRPK2P78362 688 aaKnown RBP9.61□□□□□ -0.87
SMC4-217ENST00000485867 GPR37L1O60883 481 aa9.6□□□□□ -0.87
SMC4-217ENST00000485867 FOXD4L5Q5VV16 416 aaPredicted RBP9.6□□□□□ -0.87
SMC4-217ENST00000485867 MSL1Q68DK7 614 aa9.6□□□□□ -0.87
SMC4-217ENST00000485867 TNS4Q8IZW8 715 aa9.6□□□□□ -0.87
SMC4-217ENST00000485867 KCNH5Q8NCM2 988 aa9.6□□□□□ -0.87
SMC4-217ENST00000485867 CYLDQ9NQC7 956 aa9.6□□□□□ -0.87
SMC4-217ENST00000485867 PCDHB9Q9Y5E1 797 aa9.6□□□□□ -0.87
SMC4-217ENST00000485867 CD2APQ9Y5K6 639 aa9.6□□□□□ -0.87
SMC4-217ENST00000485867 TAF1LQ8IZX4 1826 aa9.6□□□□□ -0.87
SMC4-217ENST00000485867 C5P01031 1676 aa9.6□□□□□ -0.87
SMC4-217ENST00000485867 USP54Q70EL1 1684 aa9.59□□□□□ -0.87
SMC4-217ENST00000485867 IL2RBP14784 551 aa9.59□□□□□ -0.87
SMC4-217ENST00000485867 COL23A1Q86Y22 540 aaPredicted RBP9.59□□□□□ -0.87
SMC4-217ENST00000485867 BANK1Q8NDB2 785 aa9.59□□□□□ -0.87
SMC4-217ENST00000485867 CABP1Q9NZU7 370 aa9.59□□□□□ -0.87
SMC4-217ENST00000485867 ITGA6P23229 1130 aa9.58□□□□□ -0.88
SMC4-217ENST00000485867 JMYQ8N9B5 988 aa9.58□□□□□ -0.88
SMC4-217ENST00000485867 MTMR14Q8NCE2 650 aa9.58□□□□□ -0.88
SMC4-217ENST00000485867 NLRP2Q9NX02 1062 aa9.58□□□□□ -0.88
SMC4-217ENST00000485867 NSD2O96028 1365 aa9.58□□□□□ -0.88
SMC4-217ENST00000485867 FAM208AQ9UK61 1670 aaKnown RBP9.58□□□□□ -0.88
SMC4-217ENST00000485867 TTC21BQ7Z4L5 1316 aa9.57□□□□□ -0.88
SMC4-217ENST00000485867 MON2Q7Z3U7 1717 aa9.57□□□□□ -0.88
SMC4-217ENST00000485867 TOMM70O94826 608 aa9.57□□□□□ -0.88
SMC4-217ENST00000485867 KLRG1Q96E93 195 aa9.57□□□□□ -0.88
SMC4-217ENST00000485867 IGSF1Q8N6C5 1336 aa9.56□□□□□ -0.88
SMC4-217ENST00000485867 CENPJQ9HC77 1338 aaPredicted RBP9.56□□□□□ -0.88
SMC4-217ENST00000485867 ANKRD36BQ8N2N9 1353 aa9.56□□□□□ -0.88
SMC4-217ENST00000485867 NR1H3Q13133 447 aa9.56□□□□□ -0.88
SMC4-217ENST00000485867 CNTNAP3BQ96NU0 1288 aa9.56□□□□□ -0.88
SMC4-217ENST00000485867 COL25A1Q9BXS0 654 aaPredicted RBP9.56□□□□□ -0.88
SMC4-217ENST00000485867 CNTNAP3Q9BZ76 1288 aa9.56□□□□□ -0.88
SMC4-217ENST00000485867 WWC3Q9ULE0 1092 aa9.56□□□□□ -0.88
SMC4-217ENST00000485867 TOGARAM1Q9Y4F4 1720 aa9.56□□□□□ -0.88
SMC4-217ENST00000485867 TTC21AQ8NDW8 1320 aa9.56□□□□□ -0.88
SMC4-217ENST00000485867 UBR3Q6ZT12 1888 aa9.55□□□□□ -0.88
SMC4-217ENST00000485867 HTRA3P83110 453 aa9.55□□□□□ -0.88
SMC4-217ENST00000485867 CCNL1Q9UK58 526 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms