RNA–Protein interactions for RNA: ENST00000485621.1

TRAPPC10-211, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-211ENST00000485621 ZBTB39O15060 712 aa11.07□□□□□ -0.64
TRAPPC10-211ENST00000485621 DEAF1O75398 565 aaPredicted RBP11.07□□□□□ -0.64
TRAPPC10-211ENST00000485621 IREB2P48200 963 aaKnown RBP11.07□□□□□ -0.64
TRAPPC10-211ENST00000485621 PRSS36Q5K4E3 855 aa11.07□□□□□ -0.64
TRAPPC10-211ENST00000485621 IL22RA1Q8N6P7 574 aa11.07□□□□□ -0.64
TRAPPC10-211ENST00000485621 SLAIN2Q9P270 581 aa11.07□□□□□ -0.64
TRAPPC10-211ENST00000485621 FNDC3AQ9Y2H6 1198 aaKnown RBP11.07□□□□□ -0.64
TRAPPC10-211ENST00000485621 IGF2-ASQ6U949 168 aa11.06□□□□□ -0.64
TRAPPC10-211ENST00000485621 WFDC12Q8WWY7 111 aa11.06□□□□□ -0.64
TRAPPC10-211ENST00000485621 SEPT3Q9UH03 358 aa11.06□□□□□ -0.64
TRAPPC10-211ENST00000485621 SCO2A0A1W2PP80 73 aa11.05□□□□□ -0.64
TRAPPC10-211ENST00000485621 H2AFB1P0C5Y9 115 aa11.05□□□□□ -0.64
TRAPPC10-211ENST00000485621 H2AFB2P0C5Z0 115 aa11.05□□□□□ -0.64
TRAPPC10-211ENST00000485621 HOXD8P13378 290 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC10-211ENST00000485621 ABTB2Q8N961 1025 aa11.05□□□□□ -0.64
TRAPPC10-211ENST00000485621 TRIM33Q9UPN9 1127 aa11.05□□□□□ -0.64
TRAPPC10-211ENST00000485621 TTC39BQ5VTQ0 682 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC10-211ENST00000485621 OR13H1Q8NG92 308 aa11.04□□□□□ -0.64
TRAPPC10-211ENST00000485621 NOS3P29474 1203 aa11.03□□□□□ -0.64
TRAPPC10-211ENST00000485621 SPACA7Q96KW9 195 aa11.03□□□□□ -0.64
TRAPPC10-211ENST00000485621 GTF3C3Q9Y5Q9 886 aa11.03□□□□□ -0.64
TRAPPC10-211ENST00000485621 DLL1O00548 723 aa11.02□□□□□ -0.65
TRAPPC10-211ENST00000485621 SCNN1AP37088 669 aa11.02□□□□□ -0.65
TRAPPC10-211ENST00000485621 HYAL2Q12891 473 aa11.02□□□□□ -0.65
TRAPPC10-211ENST00000485621 FOXD4L6Q3SYB3 417 aaPredicted RBP11.02□□□□□ -0.65
TRAPPC10-211ENST00000485621 COL13A1Q5TAT6 717 aaPredicted RBP11.02□□□□□ -0.65
TRAPPC10-211ENST00000485621 FOXD4L3Q6VB84 417 aaPredicted RBP11.02□□□□□ -0.65
TRAPPC10-211ENST00000485621 SSBP4Q9BWG4 385 aaPredicted RBP11.02□□□□□ -0.65
TRAPPC10-211ENST00000485621 ATP11AP98196 1134 aa11□□□□□ -0.65
TRAPPC10-211ENST00000485621 ATCAYQ86WG3 371 aa11□□□□□ -0.65
TRAPPC10-211ENST00000485621 LACRTQ9GZZ8 138 aa11□□□□□ -0.65
TRAPPC10-211ENST00000485621 ABI2Q9NYB9 513 aaPredicted RBP11□□□□□ -0.65
TRAPPC10-211ENST00000485621 CEP135Q66GS9 1140 aa10.99□□□□□ -0.65
TRAPPC10-211ENST00000485621 CCDC82Q8N4S0 544 aa10.99□□□□□ -0.65
TRAPPC10-211ENST00000485621 NUDT16Q96DE0 195 aaKnown RBP10.99□□□□□ -0.65
TRAPPC10-211ENST00000485621 MEGF10Q96KG7 1140 aa10.99□□□□□ -0.65
TRAPPC10-211ENST00000485621 CYP2E1P05181 493 aaPredicted RBP10.98□□□□□ -0.65
TRAPPC10-211ENST00000485621 SETDB1Q15047 1291 aa10.98□□□□□ -0.65
TRAPPC10-211ENST00000485621 MRPL18Q9H0U6 180 aaKnown RBP10.98□□□□□ -0.65
TRAPPC10-211ENST00000485621 AKTIPQ9H8T0 292 aa10.98□□□□□ -0.65
TRAPPC10-211ENST00000485621 PPME1Q9Y570 386 aa10.98□□□□□ -0.65
TRAPPC10-211ENST00000485621 SMNDC1O75940 238 aaKnown RBP eCLIP10.97□□□□□ -0.65
TRAPPC10-211ENST00000485621 ALX3O95076 343 aa10.97□□□□□ -0.65
TRAPPC10-211ENST00000485621 MUC3BQ9H195 1237 aa10.97□□□□□ -0.65
TRAPPC10-211ENST00000485621 ELP3Q9H9T3 547 aa10.97□□□□□ -0.65
TRAPPC10-211ENST00000485621 SRA1Q9HD15 236 aaKnown RBP10.97□□□□□ -0.65
TRAPPC10-211ENST00000485621 CDC25BP30305 580 aa10.96□□□□□ -0.65
TRAPPC10-211ENST00000485621 TXNDC11Q6PKC3 985 aa10.96□□□□□ -0.65
TRAPPC10-211ENST00000485621 ZNF438Q7Z4V0 828 aa10.96□□□□□ -0.65
TRAPPC10-211ENST00000485621 NCAPG2Q86XI2 1143 aa10.96□□□□□ -0.65
TRAPPC10-211ENST00000485621 MAP4K3Q8IVH8 894 aa10.96□□□□□ -0.65
TRAPPC10-211ENST00000485621 CACTIN-AS1Q8N1I8 211 aa10.96□□□□□ -0.65
TRAPPC10-211ENST00000485621 RASSF4Q9H2L5 321 aa10.96□□□□□ -0.65
TRAPPC10-211ENST00000485621 LINC01387J3KSC0 135 aa10.95□□□□□ -0.66
TRAPPC10-211ENST00000485621 DNM1Q05193 864 aaKnown RBP10.95□□□□□ -0.66
TRAPPC10-211ENST00000485621 PDE12Q6L8Q7 609 aaKnown RBP10.95□□□□□ -0.66
TRAPPC10-211ENST00000485621 HELQQ8TDG4 1101 aa10.95□□□□□ -0.66
TRAPPC10-211ENST00000485621 EDEM1Q92611 657 aa10.95□□□□□ -0.66
TRAPPC10-211ENST00000485621 TMEM63CQ9P1W3 806 aa10.95□□□□□ -0.66
TRAPPC10-211ENST00000485621 DCAF11Q8TEB1 546 aa10.94□□□□□ -0.66
TRAPPC10-211ENST00000485621 KANSL3Q9P2N6 904 aa10.94□□□□□ -0.66
TRAPPC10-211ENST00000485621 F8W735 103 aaPredicted RBP10.93□□□□□ -0.66
TRAPPC10-211ENST00000485621 KIF4AO95239 1232 aa10.93□□□□□ -0.66
TRAPPC10-211ENST00000485621 CDC27P30260 824 aa10.93□□□□□ -0.66
TRAPPC10-211ENST00000485621 PCSK2P16519 638 aa10.92□□□□□ -0.66
TRAPPC10-211ENST00000485621 C8orf34Q49A92 452 aa10.92□□□□□ -0.66
TRAPPC10-211ENST00000485621 NOM1Q5C9Z4 860 aaKnown RBP10.92□□□□□ -0.66
TRAPPC10-211ENST00000485621 AGGF1Q8N302 714 aaeCLIP10.92□□□□□ -0.66
TRAPPC10-211ENST00000485621 TMEM130Q8N3G9 435 aa10.92□□□□□ -0.66
TRAPPC10-211ENST00000485621 TTC16Q8NEE8 873 aa10.92□□□□□ -0.66
TRAPPC10-211ENST00000485621 GTF3C2Q8WUA4 911 aaPredicted RBP10.92□□□□□ -0.66
TRAPPC10-211ENST00000485621 ZFP64Q9NPA5 681 aa10.92□□□□□ -0.66
TRAPPC10-211ENST00000485621 CNTN3Q9P232 1028 aa10.92□□□□□ -0.66
TRAPPC10-211ENST00000485621 RPLP1P05386 114 aaKnown RBP10.91□□□□□ -0.66
TRAPPC10-211ENST00000485621 MPSTP25325 297 aa10.91□□□□□ -0.66
TRAPPC10-211ENST00000485621 ARTNQ5T4W7 220 aa10.91□□□□□ -0.66
TRAPPC10-211ENST00000485621 CEP120Q8N960 986 aa10.91□□□□□ -0.66
TRAPPC10-211ENST00000485621 GALNT11Q8NCW6 608 aa10.91□□□□□ -0.66
TRAPPC10-211ENST00000485621 PBX4Q9BYU1 374 aa10.91□□□□□ -0.66
TRAPPC10-211ENST00000485621 A6NHS1 94 aa10.9□□□□□ -0.66
TRAPPC10-211ENST00000485621 GLB1P16278 677 aa10.9□□□□□ -0.66
TRAPPC10-211ENST00000485621 MTMR3Q13615 1198 aa10.9□□□□□ -0.66
TRAPPC10-211ENST00000485621 ADAMTSL4Q6UY14 1074 aa10.9□□□□□ -0.66
TRAPPC10-211ENST00000485621 PRR23CQ6ZRP0 262 aa10.9□□□□□ -0.66
TRAPPC10-211ENST00000485621 DZIP1LQ8IYY4 767 aaKnown RBP10.9□□□□□ -0.66
TRAPPC10-211ENST00000485621 CARD10Q9BWT7 1032 aa10.9□□□□□ -0.66
TRAPPC10-211ENST00000485621 SH2B1Q9NRF2 756 aaPredicted RBP10.9□□□□□ -0.66
TRAPPC10-211ENST00000485621 TMEM88BA6NKF7 163 aa10.89□□□□□ -0.67
TRAPPC10-211ENST00000485621 FAM177BA6PVY3 158 aa10.89□□□□□ -0.67
TRAPPC10-211ENST00000485621 EIF1AXP47813 144 aaKnown RBP10.89□□□□□ -0.67
TRAPPC10-211ENST00000485621 FAM117BQ6P1L5 589 aa10.89□□□□□ -0.67
TRAPPC10-211ENST00000485621 GGNBP2Q9H3C7 697 aa10.89□□□□□ -0.67
TRAPPC10-211ENST00000485621 PPP1R15AO75807 674 aaPredicted RBP10.88□□□□□ -0.67
TRAPPC10-211ENST00000485621 PDGFAP04085 211 aa10.88□□□□□ -0.67
TRAPPC10-211ENST00000485621 PTPRAP18433 802 aa10.88□□□□□ -0.67
TRAPPC10-211ENST00000485621 CES1P23141 567 aa10.88□□□□□ -0.67
TRAPPC10-211ENST00000485621 SSFA2P28290 1259 aa10.88□□□□□ -0.67
TRAPPC10-211ENST00000485621 CD68P34810 354 aaPredicted RBP10.88□□□□□ -0.67
TRAPPC10-211ENST00000485621 AAMPQ13685 434 aa10.88□□□□□ -0.67
TRAPPC10-211ENST00000485621 C1orf127Q8N9H9 656 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms