RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 DPF2Q92785 391 aa32.96■■■□□ 2.87
HLA-F-227ENST00000485513 ZC3H12CQ9C0D7 883 aaKnown RBP32.96■■■□□ 2.87
HLA-F-227ENST00000485513 PGAP2Q9UHJ9 254 aa32.96■■■□□ 2.87
HLA-F-227ENST00000485513 SHTN1A0MZ66 631 aa32.95■■■□□ 2.87
HLA-F-227ENST00000485513 UFL1O94874 794 aa32.95■■■□□ 2.87
HLA-F-227ENST00000485513 HIRAP54198 1017 aaPredicted RBP32.95■■■□□ 2.87
HLA-F-227ENST00000485513 CST9Q5W186 159 aa32.95■■■□□ 2.87
HLA-F-227ENST00000485513 ANKRD18AQ8IVF6 992 aa32.95■■■□□ 2.87
HLA-F-227ENST00000485513 ZC3H15Q8WU90 426 aaKnown RBP32.95■■■□□ 2.87
HLA-F-227ENST00000485513 GGA1Q9UJY5 639 aa32.95■■■□□ 2.87
HLA-F-227ENST00000485513 SALL2Q9Y467 1007 aaPredicted RBP32.95■■■□□ 2.87
HLA-F-227ENST00000485513 FANCIQ9NVI1 1328 aa32.95■■■□□ 2.86
HLA-F-227ENST00000485513 CTSWP56202 376 aa32.94■■■□□ 2.86
HLA-F-227ENST00000485513 CWF19L2Q2TBE0 894 aaKnown RBP32.94■■■□□ 2.86
HLA-F-227ENST00000485513 FOXN1O15353 648 aa32.93■■■□□ 2.86
HLA-F-227ENST00000485513 WDR63Q8IWG1 891 aa32.93■■■□□ 2.86
HLA-F-227ENST00000485513 AIDAQ96BJ3 306 aa32.93■■■□□ 2.86
HLA-F-227ENST00000485513 WDR33Q9C0J8 1336 aaKnown RBP32.93■■■□□ 2.86
HLA-F-227ENST00000485513 MYH3P11055 1940 aa32.92■■■□□ 2.86
HLA-F-227ENST00000485513 NEURL1BA8MQ27 555 aa32.92■■■□□ 2.86
HLA-F-227ENST00000485513 GLIS2Q9BZE0 524 aaPredicted RBP32.92■■■□□ 2.86
HLA-F-227ENST00000485513 KCNQ5Q9NR82 932 aa32.92■■■□□ 2.86
HLA-F-227ENST00000485513 G3V3G9 751 aa32.91■■■□□ 2.86
HLA-F-227ENST00000485513 RPS12P25398 132 aaKnown RBP32.91■■■□□ 2.86
HLA-F-227ENST00000485513 DCAF8Q5TAQ9 597 aa32.91■■■□□ 2.86
HLA-F-227ENST00000485513 CDC5LQ99459 802 aaKnown RBP32.91■■■□□ 2.86
HLA-F-227ENST00000485513 RTL9Q8NET4 1388 aa32.91■■■□□ 2.86
HLA-F-227ENST00000485513 CACNA1FO60840 1977 aa32.9■■■□□ 2.86
HLA-F-227ENST00000485513 FLIIQ13045 1269 aa32.9■■■□□ 2.86
HLA-F-227ENST00000485513 TTLL11Q8NHH1 800 aa32.9■■■□□ 2.86
HLA-F-227ENST00000485513 WBP1LQ9NX94 342 aa32.9■■■□□ 2.86
HLA-F-227ENST00000485513 XDHP47989 1333 aa32.89■■■□□ 2.86
HLA-F-227ENST00000485513 PAXIP1Q6ZW49 1069 aaPredicted RBP32.89■■■□□ 2.86
HLA-F-227ENST00000485513 TLL2Q9Y6L7 1015 aa32.89■■■□□ 2.86
HLA-F-227ENST00000485513 SCN9AQ15858 1988 aa32.89■■■□□ 2.85
HLA-F-227ENST00000485513 CELF2O95319 508 aaKnown RBP32.88■■■□□ 2.85
HLA-F-227ENST00000485513 CDC37L1Q7L3B6 337 aa32.88■■■□□ 2.85
HLA-F-227ENST00000485513 SAMD7Q7Z3H4 446 aa32.88■■■□□ 2.85
HLA-F-227ENST00000485513 UBE3BQ7Z3V4 1068 aa32.88■■■□□ 2.85
HLA-F-227ENST00000485513 H7C1W4 665 aa32.87■■■□□ 2.85
HLA-F-227ENST00000485513 ECE1P42892 770 aa32.87■■■□□ 2.85
HLA-F-227ENST00000485513 FKBP5Q13451 457 aaPredicted RBP32.87■■■□□ 2.85
HLA-F-227ENST00000485513 CAPNS2Q96L46 248 aa32.87■■■□□ 2.85
HLA-F-227ENST00000485513 GREM2Q9H772 168 aa32.87■■■□□ 2.85
HLA-F-227ENST00000485513 VAMP4O75379 141 aa32.86■■■□□ 2.85
HLA-F-227ENST00000485513 CTCFP49711 727 aaPredicted RBP32.86■■■□□ 2.85
HLA-F-227ENST00000485513 TBC1D10BQ4KMP7 808 aaPredicted RBP32.86■■■□□ 2.85
HLA-F-227ENST00000485513 VIL1P09327 827 aaKnown RBP32.85■■■□□ 2.85
HLA-F-227ENST00000485513 ATP2B4P23634 1241 aa32.85■■■□□ 2.85
HLA-F-227ENST00000485513 EXOSC9Q06265 439 aaKnown RBP32.85■■■□□ 2.85
HLA-F-227ENST00000485513 SPEF2Q9C093 1822 aa32.84■■■□□ 2.85
HLA-F-227ENST00000485513 MAP2K1Q02750 393 aaPredicted RBP32.84■■■□□ 2.85
HLA-F-227ENST00000485513 GCKRQ14397 625 aa32.84■■■□□ 2.85
HLA-F-227ENST00000485513 CYP4F22Q6NT55 531 aa32.84■■■□□ 2.85
HLA-F-227ENST00000485513 DNAAF4Q8WXU2 420 aa32.84■■■□□ 2.85
HLA-F-227ENST00000485513 BSDC1Q9NW68 430 aaPredicted RBP32.84■■■□□ 2.85
HLA-F-227ENST00000485513 GRM1Q13255 1194 aa32.83■■■□□ 2.85
HLA-F-227ENST00000485513 MYH16Q9H6N6 1097 aa32.83■■■□□ 2.85
HLA-F-227ENST00000485513 ZNF408Q9H9D4 720 aa32.83■■■□□ 2.85
HLA-F-227ENST00000485513 PRDM10Q9NQV6 1147 aa32.83■■■□□ 2.85
HLA-F-227ENST00000485513 EGFRP00533 1210 aa32.82■■■□□ 2.84
HLA-F-227ENST00000485513 RBM26Q5T8P6 1007 aaKnown RBP32.82■■■□□ 2.84
HLA-F-227ENST00000485513 SAPCD2Q86UD0 394 aa32.82■■■□□ 2.84
HLA-F-227ENST00000485513 USP48Q86UV5 1035 aa32.82■■■□□ 2.84
HLA-F-227ENST00000485513 FAM9BQ8IZU0 186 aa32.82■■■□□ 2.84
HLA-F-227ENST00000485513 THSD7BQ9C0I4 1608 aa32.81■■■□□ 2.84
HLA-F-227ENST00000485513 LINS1Q8NG48 757 aa32.81■■■□□ 2.84
HLA-F-227ENST00000485513 MINPP1Q9UNW1 487 aa32.81■■■□□ 2.84
HLA-F-227ENST00000485513 PLA2G12BQ9BX93 195 aa32.8■■■□□ 2.84
HLA-F-227ENST00000485513 SPINK5Q9NQ38 1064 aaPredicted RBP32.8■■■□□ 2.84
HLA-F-227ENST00000485513 PSME4Q14997 1843 aa32.79■■■□□ 2.84
HLA-F-227ENST00000485513 CAPN15O75808 1086 aa32.79■■■□□ 2.84
HLA-F-227ENST00000485513 KIF4BQ2VIQ3 1234 aa32.79■■■□□ 2.84
HLA-F-227ENST00000485513 POLR2AP24928 1970 aaKnown RBP32.79■■■□□ 2.84
HLA-F-227ENST00000485513 CASP7P55210 303 aa32.78■■■□□ 2.84
HLA-F-227ENST00000485513 RSBN1LQ6PCB5 846 aaPredicted RBP32.78■■■□□ 2.84
HLA-F-227ENST00000485513 KRT26Q7Z3Y9 468 aa32.78■■■□□ 2.84
HLA-F-227ENST00000485513 IGHMBP2P38935 993 aaKnown RBP32.77■■■□□ 2.84
HLA-F-227ENST00000485513 AGBL3Q8NEM8 1001 aa32.77■■■□□ 2.84
HLA-F-227ENST00000485513 DCPSQ96C86 337 aaKnown RBP32.77■■■□□ 2.84
HLA-F-227ENST00000485513 HHIPL1Q96JK4 782 aa32.77■■■□□ 2.84
HLA-F-227ENST00000485513 ZNF609O15014 1411 aa32.77■■■□□ 2.84
HLA-F-227ENST00000485513 MED23Q9ULK4 1368 aa32.76■■■□□ 2.83
HLA-F-227ENST00000485513 WTIPA6NIX2 430 aaPredicted RBP32.76■■■□□ 2.83
HLA-F-227ENST00000485513 LBX1P52954 281 aa32.76■■■□□ 2.83
HLA-F-227ENST00000485513 PODNQ7Z5L7 613 aa32.76■■■□□ 2.83
HLA-F-227ENST00000485513 ITGA6P23229 1130 aa32.75■■■□□ 2.83
HLA-F-227ENST00000485513 CCT4P50991 539 aaKnown RBP32.75■■■□□ 2.83
HLA-F-227ENST00000485513 HSPA8P11142 646 aaKnown RBP32.74■■■□□ 2.83
HLA-F-227ENST00000485513 FAM161AQ3B820 660 aa32.74■■■□□ 2.83
HLA-F-227ENST00000485513 DLK2Q6UY11 383 aa32.74■■■□□ 2.83
HLA-F-227ENST00000485513 USP17L3A6NCW0 530 aa32.73■■■□□ 2.83
HLA-F-227ENST00000485513 USP17L4A6NCW7 530 aa32.73■■■□□ 2.83
HLA-F-227ENST00000485513 AOC2O75106 756 aa32.73■■■□□ 2.83
HLA-F-227ENST00000485513 CSF1RP07333 972 aa32.73■■■□□ 2.83
HLA-F-227ENST00000485513 MAP2K2P36507 400 aa32.73■■■□□ 2.83
HLA-F-227ENST00000485513 ZNF280AP59817 542 aaPredicted RBP32.73■■■□□ 2.83
HLA-F-227ENST00000485513 USP17L1Q7RTZ2 530 aa32.73■■■□□ 2.83
HLA-F-227ENST00000485513 BEGAINQ9BUH8 593 aa32.73■■■□□ 2.83
HLA-F-227ENST00000485513 F6X3S4 739 aa32.72■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms