RNA–Protein interactions for RNA: ENST00000485363.1

SIK3-211, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-211ENST00000485363 TTLL11Q8NHH1 800 aa20.28■□□□□ 0.84
SIK3-211ENST00000485363 GGA1Q9UJY5 639 aa20.28■□□□□ 0.84
SIK3-211ENST00000485363 CNTNAP1P78357 1384 aa20.28■□□□□ 0.84
SIK3-211ENST00000485363 ECE2O60344 883 aa20.27■□□□□ 0.84
SIK3-211ENST00000485363 GCKRQ14397 625 aa20.27■□□□□ 0.84
SIK3-211ENST00000485363 LINS1Q8NG48 757 aa20.27■□□□□ 0.84
SIK3-211ENST00000485363 GPR101Q96P66 508 aaPredicted RBP20.27■□□□□ 0.84
SIK3-211ENST00000485363 RTL9Q8NET4 1388 aa20.26■□□□□ 0.83
SIK3-211ENST00000485363 G3V3G9 751 aa20.26■□□□□ 0.83
SIK3-211ENST00000485363 PSMD14O00487 310 aa20.26■□□□□ 0.83
SIK3-211ENST00000485363 DOK7Q18PE1 504 aa20.26■□□□□ 0.83
SIK3-211ENST00000485363 DCAF8Q5TAQ9 597 aa20.26■□□□□ 0.83
SIK3-211ENST00000485363 GREM2Q9H772 168 aa20.26■□□□□ 0.83
SIK3-211ENST00000485363 CNOT7Q9UIV1 285 aaKnown RBP20.26■□□□□ 0.83
SIK3-211ENST00000485363 XDHP47989 1333 aa20.26■□□□□ 0.83
SIK3-211ENST00000485363 H7C1D1 291 aa20.25■□□□□ 0.83
SIK3-211ENST00000485363 IFFO2Q5TF58 517 aa20.25■□□□□ 0.83
SIK3-211ENST00000485363 DPF2Q92785 391 aa20.25■□□□□ 0.83
SIK3-211ENST00000485363 ZBTB12Q9Y330 459 aaPredicted RBP20.25■□□□□ 0.83
SIK3-211ENST00000485363 SPEF2Q9C093 1822 aa20.25■□□□□ 0.83
SIK3-211ENST00000485363 TRPM7Q96QT4 1865 aa20.24■□□□□ 0.83
SIK3-211ENST00000485363 HSPA1AP0DMV8 641 aaKnown RBP20.24■□□□□ 0.83
SIK3-211ENST00000485363 HSPA1BP0DMV9 641 aaKnown RBP20.24■□□□□ 0.83
SIK3-211ENST00000485363 ATP2B4P23634 1241 aa20.24■□□□□ 0.83
SIK3-211ENST00000485363 MICALL2Q8IY33 904 aa20.24■□□□□ 0.83
SIK3-211ENST00000485363 ZC3H15Q8WU90 426 aaKnown RBP20.24■□□□□ 0.83
SIK3-211ENST00000485363 PLA2G12BQ9BX93 195 aa20.24■□□□□ 0.83
SIK3-211ENST00000485363 BSDC1Q9NW68 430 aaPredicted RBP20.24■□□□□ 0.83
SIK3-211ENST00000485363 RPS12P25398 132 aaKnown RBP20.23■□□□□ 0.83
SIK3-211ENST00000485363 PGAP2Q9UHJ9 254 aa20.23■□□□□ 0.83
SIK3-211ENST00000485363 ABT1Q9ULW3 272 aaKnown RBP20.23■□□□□ 0.83
SIK3-211ENST00000485363 ZNF521Q96K83 1311 aa20.23■□□□□ 0.83
SIK3-211ENST00000485363 TRAF5O00463 557 aa20.22■□□□□ 0.83
SIK3-211ENST00000485363 CASP7P55210 303 aa20.22■□□□□ 0.83
SIK3-211ENST00000485363 DEFB115Q30KQ5 88 aa20.22■□□□□ 0.83
SIK3-211ENST00000485363 TRPM4Q8TD43 1214 aa20.22■□□□□ 0.83
SIK3-211ENST00000485363 KCNQ5Q9NR82 932 aa20.22■□□□□ 0.83
SIK3-211ENST00000485363 MINPP1Q9UNW1 487 aa20.22■□□□□ 0.83
SIK3-211ENST00000485363 SCN9AQ15858 1988 aa20.21■□□□□ 0.83
SIK3-211ENST00000485363 SHTN1A0MZ66 631 aa20.21■□□□□ 0.83
SIK3-211ENST00000485363 RASSF10A6NK89 507 aa20.21■□□□□ 0.83
SIK3-211ENST00000485363 F6X3S4 739 aa20.21■□□□□ 0.83
SIK3-211ENST00000485363 IGHMBP2P38935 993 aaKnown RBP20.21■□□□□ 0.83
SIK3-211ENST00000485363 VEGFBP49765 207 aa20.21■□□□□ 0.83
SIK3-211ENST00000485363 HIRAP54198 1017 aaPredicted RBP20.21■□□□□ 0.83
SIK3-211ENST00000485363 FMR1Q06787 632 aaKnown RBP eCLIP20.21■□□□□ 0.832e-8■■■■■ 29.9
SIK3-211ENST00000485363 CSF1RP07333 972 aa20.2■□□□□ 0.82
SIK3-211ENST00000485363 VIL1P09327 827 aaKnown RBP20.2■□□□□ 0.82
SIK3-211ENST00000485363 ITGA6P23229 1130 aa20.2■□□□□ 0.82
SIK3-211ENST00000485363 BEND3Q5T5X7 828 aa20.2■□□□□ 0.82
SIK3-211ENST00000485363 PSME4Q14997 1843 aa20.18■□□□□ 0.82
SIK3-211ENST00000485363 CCT4P50991 539 aaKnown RBP20.18■□□□□ 0.82
SIK3-211ENST00000485363 FAM161AQ3B820 660 aa20.18■□□□□ 0.82
SIK3-211ENST00000485363 TBC1D10BQ4KMP7 808 aaPredicted RBP20.18■□□□□ 0.82
SIK3-211ENST00000485363 CST9Q5W186 159 aa20.18■□□□□ 0.82
SIK3-211ENST00000485363 CDC37L1Q7L3B6 337 aa20.18■□□□□ 0.82
SIK3-211ENST00000485363 SAMD7Q7Z3H4 446 aa20.18■□□□□ 0.82
SIK3-211ENST00000485363 MPHOSPH8Q99549 860 aa20.18■□□□□ 0.82
SIK3-211ENST00000485363 GLIS2Q9BZE0 524 aaPredicted RBP20.18■□□□□ 0.82
SIK3-211ENST00000485363 MED23Q9ULK4 1368 aa20.18■□□□□ 0.82
SIK3-211ENST00000485363 PODNQ7Z5L7 613 aa20.17■□□□□ 0.82
SIK3-211ENST00000485363 ANKRD2Q9GZV1 360 aa20.17■□□□□ 0.82
SIK3-211ENST00000485363 ANKRD18BA2A2Z9 1011 aa20.16■□□□□ 0.82
SIK3-211ENST00000485363 E9PSI1 815 aa20.16■□□□□ 0.82
SIK3-211ENST00000485363 CELF2O95319 508 aaKnown RBP20.16■□□□□ 0.82
SIK3-211ENST00000485363 COL13A1Q5TAT6 717 aaPredicted RBP20.16■□□□□ 0.82
SIK3-211ENST00000485363 RSBN1LQ6PCB5 846 aaPredicted RBP20.16■□□□□ 0.82
SIK3-211ENST00000485363 LEMD3Q9Y2U8 911 aa20.16■□□□□ 0.82
SIK3-211ENST00000485363 RBM26Q5T8P6 1007 aaKnown RBP20.15■□□□□ 0.82
SIK3-211ENST00000485363 AGBL3Q8NEM8 1001 aa20.15■□□□□ 0.82
SIK3-211ENST00000485363 TLL2Q9Y6L7 1015 aa20.15■□□□□ 0.82
SIK3-211ENST00000485363 WDR33Q9C0J8 1336 aaKnown RBP20.15■□□□□ 0.82
SIK3-211ENST00000485363 ZNF609O15014 1411 aa20.15■□□□□ 0.82
SIK3-211ENST00000485363 POLR2AP24928 1970 aaKnown RBP20.14■□□□□ 0.81
SIK3-211ENST00000485363 USP17L3A6NCW0 530 aa20.14■□□□□ 0.81
SIK3-211ENST00000485363 USP17L4A6NCW7 530 aa20.14■□□□□ 0.81
SIK3-211ENST00000485363 WTIPA6NIX2 430 aaPredicted RBP20.14■□□□□ 0.81
SIK3-211ENST00000485363 GRM8O00222 908 aa20.14■□□□□ 0.81
SIK3-211ENST00000485363 ALDH1L1O75891 902 aa20.14■□□□□ 0.81
SIK3-211ENST00000485363 EGFRP00533 1210 aa20.14■□□□□ 0.81
SIK3-211ENST00000485363 ECE1P42892 770 aa20.14■□□□□ 0.81
SIK3-211ENST00000485363 FOXO4P98177 505 aa20.14■□□□□ 0.81
SIK3-211ENST00000485363 IFIT5Q13325 482 aaKnown RBP20.14■□□□□ 0.81
SIK3-211ENST00000485363 KIF4BQ2VIQ3 1234 aa20.14■□□□□ 0.81
SIK3-211ENST00000485363 SLC4A10Q6U841 1118 aa20.14■□□□□ 0.81
SIK3-211ENST00000485363 PAXIP1Q6ZW49 1069 aaPredicted RBP20.14■□□□□ 0.81
SIK3-211ENST00000485363 USP17L1Q7RTZ2 530 aa20.14■□□□□ 0.81
SIK3-211ENST00000485363 SRCIN1Q9C0H9 1055 aa20.14■□□□□ 0.81
SIK3-211ENST00000485363 C9orf78Q9NZ63 289 aaPredicted RBP20.14■□□□□ 0.81
SIK3-211ENST00000485363 ZNF804BA4D1E1 1349 aa20.13■□□□□ 0.81
SIK3-211ENST00000485363 USP48Q86UV5 1035 aa20.13■□□□□ 0.81
SIK3-211ENST00000485363 AIDAQ96BJ3 306 aa20.13■□□□□ 0.81
SIK3-211ENST00000485363 DCPSQ96C86 337 aaKnown RBP20.13■□□□□ 0.81
SIK3-211ENST00000485363 ZNF408Q9H9D4 720 aa20.13■□□□□ 0.81
SIK3-211ENST00000485363 CHMP3Q9Y3E7 222 aa20.13■□□□□ 0.81
SIK3-211ENST00000485363 KRT26Q7Z3Y9 468 aa20.12■□□□□ 0.81
SIK3-211ENST00000485363 SAPCD2Q86UD0 394 aa20.12■□□□□ 0.81
SIK3-211ENST00000485363 CAPNS2Q96L46 248 aa20.12■□□□□ 0.81
SIK3-211ENST00000485363 COA1Q9GZY4 146 aa20.12■□□□□ 0.81
SIK3-211ENST00000485363 FOXN1O15353 648 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms