RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 STAP2Q9UGK3 403 aa17.89■□□□□ 0.45
LRIF1-202ENST00000485275 C10orf71Q711Q0 1435 aa17.89■□□□□ 0.45
LRIF1-202ENST00000485275 LRRC37AA6NMS7 1700 aa17.89■□□□□ 0.45
LRIF1-202ENST00000485275 CACNA1SQ13698 1873 aa17.89■□□□□ 0.45
LRIF1-202ENST00000485275 METTL24Q5JXM2 366 aa17.89■□□□□ 0.45
LRIF1-202ENST00000485275 ANKRD18AQ8IVF6 992 aa17.89■□□□□ 0.45
LRIF1-202ENST00000485275 HELBQ8NG08 1087 aaPredicted RBP17.89■□□□□ 0.45
LRIF1-202ENST00000485275 KIF13BQ9NQT8 1826 aa17.89■□□□□ 0.45
LRIF1-202ENST00000485275 SNAP23O00161 211 aa17.88■□□□□ 0.45
LRIF1-202ENST00000485275 IGHMBP2P38935 993 aaKnown RBP17.88■□□□□ 0.45
LRIF1-202ENST00000485275 TTC22Q5TAA0 569 aa17.88■□□□□ 0.45
LRIF1-202ENST00000485275 MPHOSPH8Q99549 860 aa17.88■□□□□ 0.45
LRIF1-202ENST00000485275 DBNDD2Q9BQY9 259 aa17.88■□□□□ 0.45
LRIF1-202ENST00000485275 KIAA1551Q9HCM1 1747 aa17.88■□□□□ 0.45
LRIF1-202ENST00000485275 WTIPA6NIX2 430 aaPredicted RBP17.87■□□□□ 0.45
LRIF1-202ENST00000485275 TIMM10P62072 90 aa17.87■□□□□ 0.45
LRIF1-202ENST00000485275 DDX46Q7L014 1031 aaKnown RBP17.87■□□□□ 0.45
LRIF1-202ENST00000485275 GPR108Q9NPR9 543 aa17.87■□□□□ 0.45
LRIF1-202ENST00000485275 BSDC1Q9NW68 430 aaPredicted RBP17.87■□□□□ 0.45
LRIF1-202ENST00000485275 CEP126Q9P2H0 1117 aa17.87■□□□□ 0.45
LRIF1-202ENST00000485275 DLEC1Q9Y238 1755 aa17.87■□□□□ 0.45
LRIF1-202ENST00000485275 A0A1B0GUL7 405 aa17.86■□□□□ 0.45
LRIF1-202ENST00000485275 TAF5LO75529 589 aa17.86■□□□□ 0.45
LRIF1-202ENST00000485275 IFIT2P09913 472 aaKnown RBP17.86■□□□□ 0.45
LRIF1-202ENST00000485275 HOXA10P31260 410 aaPredicted RBP17.86■□□□□ 0.45
LRIF1-202ENST00000485275 RPS8P62241 208 aaKnown RBP17.86■□□□□ 0.45
LRIF1-202ENST00000485275 CHRNDQ07001 517 aa17.86■□□□□ 0.45
LRIF1-202ENST00000485275 GRAPQ13588 217 aa17.86■□□□□ 0.45
LRIF1-202ENST00000485275 GRAPLQ8TC17 118 aaPredicted RBP17.86■□□□□ 0.45
LRIF1-202ENST00000485275 MROH5Q6ZUA9 1318 aa17.86■□□□□ 0.45
LRIF1-202ENST00000485275 LTBP1Q14766 1721 aa17.86■□□□□ 0.45
LRIF1-202ENST00000485275 PDE8BO95263 885 aa17.86■□□□□ 0.45
LRIF1-202ENST00000485275 SRGNP10124 158 aa17.86■□□□□ 0.45
LRIF1-202ENST00000485275 ADORA1P30542 326 aa17.86■□□□□ 0.45
LRIF1-202ENST00000485275 C8orf34Q49A92 452 aa17.86■□□□□ 0.45
LRIF1-202ENST00000485275 BMP2KLQ5H9B9 411 aa17.86■□□□□ 0.45
LRIF1-202ENST00000485275 RPGRQ92834 1020 aaKnown RBP17.86■□□□□ 0.45
LRIF1-202ENST00000485275 FGFR2P21802 821 aa17.85■□□□□ 0.45
LRIF1-202ENST00000485275 MINPP1Q9UNW1 487 aa17.85■□□□□ 0.45
LRIF1-202ENST00000485275 ATF5Q9Y2D1 282 aaPredicted RBP17.85■□□□□ 0.45
LRIF1-202ENST00000485275 AOX1Q06278 1338 aa17.85■□□□□ 0.45
LRIF1-202ENST00000485275 SGIP1Q9BQI5 828 aa17.84■□□□□ 0.45
LRIF1-202ENST00000485275 MTFR1LQ9H019 292 aa17.84■□□□□ 0.45
LRIF1-202ENST00000485275 TTC41PQ6P2S7 1318 aa17.84■□□□□ 0.45
LRIF1-202ENST00000485275 ATP2B3Q16720 1220 aa17.84■□□□□ 0.45
LRIF1-202ENST00000485275 ECHDC1Q9NTX5 307 aa17.84■□□□□ 0.45
LRIF1-202ENST00000485275 CHRNA5P30532 468 aa17.83■□□□□ 0.44
LRIF1-202ENST00000485275 NEUROD6Q96NK8 337 aa17.83■□□□□ 0.44
LRIF1-202ENST00000485275 AK9Q5TCS8 1911 aa17.82■□□□□ 0.44
LRIF1-202ENST00000485275 PDE6BP35913 854 aa17.82■□□□□ 0.44
LRIF1-202ENST00000485275 XAGE2Q96GT9 111 aa17.82■□□□□ 0.44
LRIF1-202ENST00000485275 RBM17Q96I25 401 aaKnown RBP17.82■□□□□ 0.44
LRIF1-202ENST00000485275 CRAMP1Q96RY5 1269 aa17.82■□□□□ 0.44
LRIF1-202ENST00000485275 SLX4Q8IY92 1834 aa17.82■□□□□ 0.44
LRIF1-202ENST00000485275 SDSP20132 328 aa17.81■□□□□ 0.44
LRIF1-202ENST00000485275 PUM3Q15397 648 aaKnown RBP17.81■□□□□ 0.44
LRIF1-202ENST00000485275 DUOX1Q9NRD9 1551 aa17.81■□□□□ 0.44
LRIF1-202ENST00000485275 AKAP11Q9UKA4 1901 aa17.81■□□□□ 0.44
LRIF1-202ENST00000485275 MAP4K4O95819 1239 aaPredicted RBP17.81■□□□□ 0.44
LRIF1-202ENST00000485275 C2CD5Q86YS7 1000 aa17.81■□□□□ 0.44
LRIF1-202ENST00000485275 PELP1Q8IZL8 1130 aaKnown RBP17.81■□□□□ 0.44
LRIF1-202ENST00000485275 AKAP2Q9Y2D5 859 aa17.81■□□□□ 0.44
LRIF1-202ENST00000485275 NDUFB9Q9Y6M9 179 aa17.81■□□□□ 0.44
LRIF1-202ENST00000485275 NPR1P16066 1061 aa17.8■□□□□ 0.44
LRIF1-202ENST00000485275 KLRK1P26718 216 aa17.8■□□□□ 0.44
LRIF1-202ENST00000485275 PTGER2P43116 358 aa17.8■□□□□ 0.44
LRIF1-202ENST00000485275 OLFM4Q6UX06 510 aa17.8■□□□□ 0.44
LRIF1-202ENST00000485275 LPIN2Q92539 896 aa17.79■□□□□ 0.44
LRIF1-202ENST00000485275 MASTLQ96GX5 879 aa17.79■□□□□ 0.44
LRIF1-202ENST00000485275 SRCAPQ6ZRS2 3230 aa17.79■□□□□ 0.44
LRIF1-202ENST00000485275 GLRX3O76003 335 aaKnown RBP17.79■□□□□ 0.44
LRIF1-202ENST00000485275 SCARF1Q14162 830 aa17.79■□□□□ 0.44
LRIF1-202ENST00000485275 BACH2Q9BYV9 841 aa17.79■□□□□ 0.44
LRIF1-202ENST00000485275 BOLA2Q9H3K6 86 aa17.79■□□□□ 0.44
LRIF1-202ENST00000485275 IRS2Q9Y4H2 1338 aa17.78■□□□□ 0.44
LRIF1-202ENST00000485275 BRCA1P38398 1863 aaKnown RBP17.78■□□□□ 0.44
LRIF1-202ENST00000485275 PPEF1O14829 653 aaPredicted RBP17.78■□□□□ 0.44
LRIF1-202ENST00000485275 ATP5JP18859 108 aa17.78■□□□□ 0.44
LRIF1-202ENST00000485275 EDC3Q96F86 508 aaKnown RBP17.78■□□□□ 0.44
LRIF1-202ENST00000485275 GPATCH3Q96I76 525 aa17.78■□□□□ 0.44
LRIF1-202ENST00000485275 PHKA1P46020 1223 aa17.77■□□□□ 0.44
LRIF1-202ENST00000485275 GPSM2P81274 684 aa17.77■□□□□ 0.44
LRIF1-202ENST00000485275 H0YIN7 160 aa17.76■□□□□ 0.43
LRIF1-202ENST00000485275 ERC2O15083 957 aa17.76■□□□□ 0.43
LRIF1-202ENST00000485275 BBOX1O75936 387 aa17.76■□□□□ 0.43
LRIF1-202ENST00000485275 PI16Q6UXB8 463 aa17.76■□□□□ 0.43
LRIF1-202ENST00000485275 ZNF622Q969S3 477 aaKnown RBP eCLIP17.76■□□□□ 0.432e-7■□□□□ 9.6
LRIF1-202ENST00000485275 COL1A1P02452 1464 aaPredicted RBP17.76■□□□□ 0.43
LRIF1-202ENST00000485275 SNED1Q8TER0 1413 aa17.76■□□□□ 0.43
LRIF1-202ENST00000485275 SEC24BO95487 1268 aa17.76■□□□□ 0.43
LRIF1-202ENST00000485275 SLC5A1P13866 664 aa17.76■□□□□ 0.43
LRIF1-202ENST00000485275 KCNA3P22001 575 aa17.76■□□□□ 0.43
LRIF1-202ENST00000485275 CCDC102BQ68D86 513 aa17.76■□□□□ 0.43
LRIF1-202ENST00000485275 STYK1Q6J9G0 422 aa17.76■□□□□ 0.43
LRIF1-202ENST00000485275 GPR101Q96P66 508 aaPredicted RBP17.76■□□□□ 0.43
LRIF1-202ENST00000485275 POLD1P28340 1107 aa17.75■□□□□ 0.43
LRIF1-202ENST00000485275 UBE4AQ14139 1066 aa17.75■□□□□ 0.43
LRIF1-202ENST00000485275 PRPF40BQ6NWY9 871 aaKnown RBP17.75■□□□□ 0.43
LRIF1-202ENST00000485275 TBC1D9Q6ZT07 1266 aa17.75■□□□□ 0.43
LRIF1-202ENST00000485275 TXNRD3Q86VQ6 643 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms