RNA–Protein interactions for RNA: ENST00000485042.1

XPA-203, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 706 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-203ENST00000485042 USP31Q70CQ4 1352 aa6.69□□□□□ -1.34
XPA-203ENST00000485042 SASH3O75995 380 aa6.68□□□□□ -1.34
XPA-203ENST00000485042 ST13P50502 369 aaKnown RBP6.68□□□□□ -1.34
XPA-203ENST00000485042 RIPOR1Q6ZS17 1223 aa6.68□□□□□ -1.34
XPA-203ENST00000485042 ZFP42Q96MM3 310 aa6.68□□□□□ -1.34
XPA-203ENST00000485042 SUV39H2Q9H5I1 410 aa6.68□□□□□ -1.34
XPA-203ENST00000485042 KANSL3Q9P2N6 904 aa6.68□□□□□ -1.34
XPA-203ENST00000485042 DDX41Q9UJV9 622 aaKnown RBP6.68□□□□□ -1.34
XPA-203ENST00000485042 PHF20L1A8MW92 1017 aa6.67□□□□□ -1.34
XPA-203ENST00000485042 MAN1A2O60476 641 aa6.67□□□□□ -1.34
XPA-203ENST00000485042 VSIG8P0DPA2 414 aa6.67□□□□□ -1.34
XPA-203ENST00000485042 EDN3P14138 238 aa6.67□□□□□ -1.34
XPA-203ENST00000485042 ATP2B1P20020 1258 aa6.67□□□□□ -1.34
XPA-203ENST00000485042 GSTT1P30711 240 aa6.67□□□□□ -1.34
XPA-203ENST00000485042 DNAJA1P31689 397 aaKnown RBP6.67□□□□□ -1.34
XPA-203ENST00000485042 RACK1P63244 317 aaKnown RBP6.67□□□□□ -1.34
XPA-203ENST00000485042 PTPN12Q05209 780 aaKnown RBP6.67□□□□□ -1.34
XPA-203ENST00000485042 GRM2Q14416 872 aa6.67□□□□□ -1.34
XPA-203ENST00000485042 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.67□□□□□ -1.34
XPA-203ENST00000485042 FIGNL1Q6PIW4 674 aa6.67□□□□□ -1.34
XPA-203ENST00000485042 EHD4Q9H223 541 aa6.67□□□□□ -1.34
XPA-203ENST00000485042 DNMT3LQ9UJW3 386 aa6.67□□□□□ -1.34
XPA-203ENST00000485042 BICRAQ9NZM4 1560 aa6.66□□□□□ -1.34
XPA-203ENST00000485042 ATXN7O15265 892 aaPredicted RBP6.66□□□□□ -1.34
XPA-203ENST00000485042 CYP2E1P05181 493 aaPredicted RBP6.66□□□□□ -1.34
XPA-203ENST00000485042 TARSP26639 723 aaKnown RBP6.66□□□□□ -1.34
XPA-203ENST00000485042 GTF2F1P35269 517 aaKnown RBP eCLIP6.66□□□□□ -1.34
XPA-203ENST00000485042 SFSWAPQ12872 951 aaKnown RBP6.66□□□□□ -1.34
XPA-203ENST00000485042 CCINQ13939 588 aa6.66□□□□□ -1.34
XPA-203ENST00000485042 XP32Q5T750 250 aa6.66□□□□□ -1.34
XPA-203ENST00000485042 VPS37DQ86XT2 251 aa6.66□□□□□ -1.34
XPA-203ENST00000485042 PNMA5Q96PV4 448 aa6.66□□□□□ -1.34
XPA-203ENST00000485042 SRA1Q9HD15 236 aaKnown RBP6.66□□□□□ -1.34
XPA-203ENST00000485042 LATS2Q9NRM7 1088 aa6.66□□□□□ -1.34
XPA-203ENST00000485042 TTF2Q9UNY4 1162 aaKnown RBP6.66□□□□□ -1.34
XPA-203ENST00000485042 TRAK1Q9UPV9 953 aa6.66□□□□□ -1.34
XPA-203ENST00000485042 A0A1W2PP55 124 aa6.65□□□□□ -1.34
XPA-203ENST00000485042 DCDC2BA2VCK2 349 aa6.65□□□□□ -1.34
XPA-203ENST00000485042 KHNYNO15037 678 aaKnown RBP6.65□□□□□ -1.34
XPA-203ENST00000485042 FAM157BP0CG42 384 aa6.65□□□□□ -1.34
XPA-203ENST00000485042 RARAP10276 462 aa6.65□□□□□ -1.34
XPA-203ENST00000485042 KCNQ4P56696 695 aa6.65□□□□□ -1.34
XPA-203ENST00000485042 ARID5AQ03989 594 aa6.65□□□□□ -1.34
XPA-203ENST00000485042 LBRQ14739 615 aaKnown RBP6.65□□□□□ -1.34
XPA-203ENST00000485042 KIAA0319Q5VV43 1072 aa6.65□□□□□ -1.34
XPA-203ENST00000485042 DHX38Q92620 1227 aaKnown RBP6.65□□□□□ -1.34
XPA-203ENST00000485042 DNAJC2Q99543 621 aaKnown RBP6.65□□□□□ -1.34
XPA-203ENST00000485042 PCDHGC4Q9Y5F7 938 aa6.65□□□□□ -1.34
XPA-203ENST00000485042 MMP20O60882 483 aa6.64□□□□□ -1.35
XPA-203ENST00000485042 TMEM151AQ8N4L1 468 aa6.64□□□□□ -1.35
XPA-203ENST00000485042 OR13H1Q8NG92 308 aa6.64□□□□□ -1.35
XPA-203ENST00000485042 GSX2Q9BZM3 304 aa6.64□□□□□ -1.35
XPA-203ENST00000485042 PSAPP07602 524 aa6.63□□□□□ -1.35
XPA-203ENST00000485042 FCGRTP55899 365 aa6.63□□□□□ -1.35
XPA-203ENST00000485042 DTHD1Q6ZMT9 781 aa6.63□□□□□ -1.35
XPA-203ENST00000485042 ERMP1Q7Z2K6 904 aa6.63□□□□□ -1.35
XPA-203ENST00000485042 NCAPG2Q86XI2 1143 aa6.63□□□□□ -1.35
XPA-203ENST00000485042 FAM177A1Q8N128 213 aaPredicted RBP6.63□□□□□ -1.35
XPA-203ENST00000485042 GMLQ99445 158 aa6.63□□□□□ -1.35
XPA-203ENST00000485042 NUCKS1Q9H1E3 243 aaKnown RBP6.63□□□□□ -1.35
XPA-203ENST00000485042 AKAP2Q9Y2D5 859 aa6.63□□□□□ -1.35
XPA-203ENST00000485042 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.63□□□□□ -1.35
XPA-203ENST00000485042 SENP3-EIF4A1A0A087X0R7 540 aa6.62□□□□□ -1.35
XPA-203ENST00000485042 H7C1W4 665 aa6.62□□□□□ -1.35
XPA-203ENST00000485042 EFSO43281 561 aa6.62□□□□□ -1.35
XPA-203ENST00000485042 GDF11O95390 407 aa6.62□□□□□ -1.35
XPA-203ENST00000485042 MAPTP10636 758 aaKnown RBP6.62□□□□□ -1.35
XPA-203ENST00000485042 NFKB1P19838 968 aa6.62□□□□□ -1.35
XPA-203ENST00000485042 CCDC85BQ15834 202 aaPredicted RBP6.62□□□□□ -1.35
XPA-203ENST00000485042 PEAR1Q5VY43 1037 aaPredicted RBP6.62□□□□□ -1.35
XPA-203ENST00000485042 DPH6Q7L8W6 267 aa6.62□□□□□ -1.35
XPA-203ENST00000485042 GLIS3Q8NEA6 775 aa6.62□□□□□ -1.35
XPA-203ENST00000485042 NOC4LQ9BVI4 516 aaKnown RBP6.62□□□□□ -1.35
XPA-203ENST00000485042 OXCT2Q9BYC2 517 aaPredicted RBP6.62□□□□□ -1.35
XPA-203ENST00000485042 LIN7BQ9HAP6 207 aa6.62□□□□□ -1.35
XPA-203ENST00000485042 COPRSQ9NQ92 184 aa6.62□□□□□ -1.35
XPA-203ENST00000485042 KBTBD4Q9NVX7 518 aa6.62□□□□□ -1.35
XPA-203ENST00000485042 MARK1Q9P0L2 795 aa6.62□□□□□ -1.35
XPA-203ENST00000485042 SALL4Q9UJQ4 1053 aa6.62□□□□□ -1.35
XPA-203ENST00000485042 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.62□□□□□ -1.35
XPA-203ENST00000485042 RASSF7Q02833 373 aa6.61□□□□□ -1.35
XPA-203ENST00000485042 PTSQ03393 145 aa6.61□□□□□ -1.35
XPA-203ENST00000485042 TNP2Q05952 138 aa6.61□□□□□ -1.35
XPA-203ENST00000485042 SPEM2Q0P670 501 aa6.61□□□□□ -1.35
XPA-203ENST00000485042 HYAL2Q12891 473 aa6.61□□□□□ -1.35
XPA-203ENST00000485042 PAK2Q13177 524 aa6.61□□□□□ -1.35
XPA-203ENST00000485042 LAMC2Q13753 1193 aa6.61□□□□□ -1.35
XPA-203ENST00000485042 RELL1Q8IUW5 271 aa6.61□□□□□ -1.35
XPA-203ENST00000485042 C3orf58Q8NDZ4 430 aa6.61□□□□□ -1.35
XPA-203ENST00000485042 BHMTQ93088 406 aa6.61□□□□□ -1.35
XPA-203ENST00000485042 OSMRQ99650 979 aa6.61□□□□□ -1.35
XPA-203ENST00000485042 ZFATQ9P243 1243 aa6.61□□□□□ -1.35
XPA-203ENST00000485042 TMEM238LA0A1B0GVL6 79 aa6.6□□□□□ -1.35
XPA-203ENST00000485042 SOBPA7XYQ1 873 aa6.6□□□□□ -1.35
XPA-203ENST00000485042 SMARCA5O60264 1052 aaPredicted RBP6.6□□□□□ -1.35
XPA-203ENST00000485042 THBS1P07996 1170 aa6.6□□□□□ -1.35
XPA-203ENST00000485042 XRCC5P13010 732 aaKnown RBP6.6□□□□□ -1.35
XPA-203ENST00000485042 PWP1Q13610 501 aa6.6□□□□□ -1.35
XPA-203ENST00000485042 GRIN2CQ14957 1233 aa6.6□□□□□ -1.35
XPA-203ENST00000485042 PRPF40BQ6NWY9 871 aaKnown RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms