RNA–Protein interactions for RNA: ENST00000484954.1

VPS50-216, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-216ENST00000484954 ZBTB42B2RXF5 422 aa6.69□□□□□ -1.34
VPS50-216ENST00000484954 IRAK1P51617 712 aa6.69□□□□□ -1.34
VPS50-216ENST00000484954 TRIP4Q15650 581 aaPredicted RBP6.69□□□□□ -1.34
VPS50-216ENST00000484954 PSAPL1Q6NUJ1 521 aa6.69□□□□□ -1.34
VPS50-216ENST00000484954 CMTR1Q8N1G2 835 aaKnown RBP6.69□□□□□ -1.34
VPS50-216ENST00000484954 EPB42P16452 691 aa6.68□□□□□ -1.34
VPS50-216ENST00000484954 NOS3P29474 1203 aa6.68□□□□□ -1.34
VPS50-216ENST00000484954 AFF1P51825 1210 aaKnown RBP6.68□□□□□ -1.34
VPS50-216ENST00000484954 MLLT1Q03111 559 aaPredicted RBP6.68□□□□□ -1.34
VPS50-216ENST00000484954 MEGF10Q96KG7 1140 aa6.68□□□□□ -1.34
VPS50-216ENST00000484954 TIMELESSQ9UNS1 1208 aa6.68□□□□□ -1.34
VPS50-216ENST00000484954 PTCD1O75127 700 aaKnown RBP6.67□□□□□ -1.34
VPS50-216ENST00000484954 XYLBO75191 536 aa6.67□□□□□ -1.34
VPS50-216ENST00000484954 PPP1R15AO75807 674 aaPredicted RBP6.67□□□□□ -1.34
VPS50-216ENST00000484954 BRD2P25440 801 aaKnown RBP6.67□□□□□ -1.34
VPS50-216ENST00000484954 PLAURQ03405 335 aa6.67□□□□□ -1.34
VPS50-216ENST00000484954 KRTAP5-3Q6L8H2 238 aa6.67□□□□□ -1.34
VPS50-216ENST00000484954 MAP3K6O95382 1288 aa6.66□□□□□ -1.34
VPS50-216ENST00000484954 RARAP10276 462 aa6.66□□□□□ -1.34
VPS50-216ENST00000484954 TAL1P17542 331 aaPredicted RBP6.66□□□□□ -1.34
VPS50-216ENST00000484954 PHLDB3Q6NSJ2 640 aa6.66□□□□□ -1.34
VPS50-216ENST00000484954 PRR23CQ6ZRP0 262 aa6.66□□□□□ -1.34
VPS50-216ENST00000484954 DHX32Q7L7V1 743 aaKnown RBP6.66□□□□□ -1.34
VPS50-216ENST00000484954 ARID3AQ99856 593 aa6.66□□□□□ -1.34
VPS50-216ENST00000484954 RGS9O75916 674 aaPredicted RBP6.65□□□□□ -1.34
VPS50-216ENST00000484954 EGFRP00533 1210 aa6.65□□□□□ -1.34
VPS50-216ENST00000484954 CPB1P15086 417 aa6.65□□□□□ -1.34
VPS50-216ENST00000484954 SSFA2P28290 1259 aa6.65□□□□□ -1.34
VPS50-216ENST00000484954 ZAP70P43403 619 aa6.65□□□□□ -1.34
VPS50-216ENST00000484954 HFE2Q6ZVN8 426 aa6.65□□□□□ -1.34
VPS50-216ENST00000484954 ATCAYQ86WG3 371 aa6.65□□□□□ -1.34
VPS50-216ENST00000484954 EFCC1Q9HA90 598 aa6.65□□□□□ -1.34
VPS50-216ENST00000484954 STIM2Q9P246 746 aa6.65□□□□□ -1.34
VPS50-216ENST00000484954 MMP20O60882 483 aa6.64□□□□□ -1.35
VPS50-216ENST00000484954 FSTP19883 344 aa6.64□□□□□ -1.35
VPS50-216ENST00000484954 MTMR3Q13615 1198 aa6.64□□□□□ -1.35
VPS50-216ENST00000484954 PERM1Q5SV97 790 aa6.64□□□□□ -1.35
VPS50-216ENST00000484954 FAM35AQ86V20 835 aa6.64□□□□□ -1.35
VPS50-216ENST00000484954 TRPM4Q8TD43 1214 aa6.64□□□□□ -1.35
VPS50-216ENST00000484954 GPR152Q8TDT2 470 aa6.64□□□□□ -1.35
VPS50-216ENST00000484954 LPIN3Q9BQK8 851 aa6.64□□□□□ -1.35
VPS50-216ENST00000484954 RNF114Q9Y508 228 aa6.64□□□□□ -1.35
VPS50-216ENST00000484954 OAS3Q9Y6K5 1087 aaKnown RBP6.64□□□□□ -1.35
VPS50-216ENST00000484954 C11orf16Q9NQ32 467 aa6.63□□□□□ -1.35
VPS50-216ENST00000484954 TLR7Q9NYK1 1049 aaKnown RBP6.63□□□□□ -1.35
VPS50-216ENST00000484954 J3QW42 95 aa6.62□□□□□ -1.35
VPS50-216ENST00000484954 GPLD1P80108 840 aa6.62□□□□□ -1.35
VPS50-216ENST00000484954 GRIK5Q16478 980 aa6.62□□□□□ -1.35
VPS50-216ENST00000484954 MSL1Q68DK7 614 aa6.62□□□□□ -1.35
VPS50-216ENST00000484954 ILDR2Q71H61 639 aa6.62□□□□□ -1.35
VPS50-216ENST00000484954 FBXO11Q86XK2 927 aa6.62□□□□□ -1.35
VPS50-216ENST00000484954 GTF3C2Q8WUA4 911 aaPredicted RBP6.62□□□□□ -1.35
VPS50-216ENST00000484954 NSUN5Q96P11 429 aaKnown RBP6.62□□□□□ -1.35
VPS50-216ENST00000484954 UBAP1LF5GYI3 381 aa6.61□□□□□ -1.35
VPS50-216ENST00000484954 ALX3O95076 343 aa6.61□□□□□ -1.35
VPS50-216ENST00000484954 MED26O95402 600 aa6.61□□□□□ -1.35
VPS50-216ENST00000484954 CD97P48960 835 aa6.61□□□□□ -1.35
VPS50-216ENST00000484954 HELQQ8TDG4 1101 aa6.61□□□□□ -1.35
VPS50-216ENST00000484954 MPSTP25325 297 aa6.6□□□□□ -1.35
VPS50-216ENST00000484954 NRLP54845 237 aa6.6□□□□□ -1.35
VPS50-216ENST00000484954 GP2P55259 537 aaKnown RBP6.6□□□□□ -1.35
VPS50-216ENST00000484954 COL13A1Q5TAT6 717 aaPredicted RBP6.6□□□□□ -1.35
VPS50-216ENST00000484954 PIK3R5Q8WYR1 880 aa6.6□□□□□ -1.35
VPS50-216ENST00000484954 A6NHS1 94 aa6.59□□□□□ -1.35
VPS50-216ENST00000484954 CYP2E1P05181 493 aaPredicted RBP6.59□□□□□ -1.35
VPS50-216ENST00000484954 EIF2AK2P19525 551 aaKnown RBP6.59□□□□□ -1.35
VPS50-216ENST00000484954 NLRP13Q86W25 1043 aa6.59□□□□□ -1.35
VPS50-216ENST00000484954 ABTB2Q8N961 1025 aa6.59□□□□□ -1.35
VPS50-216ENST00000484954 NUDT16Q96DE0 195 aaKnown RBP6.59□□□□□ -1.35
VPS50-216ENST00000484954 SMG9Q9H0W8 520 aaKnown RBP6.59□□□□□ -1.35
VPS50-216ENST00000484954 ANO2Q9NQ90 1003 aa6.59□□□□□ -1.35
VPS50-216ENST00000484954 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.59□□□□□ -1.35
VPS50-216ENST00000484954 LOC102724428A0A0B4J2F2 783 aa6.58□□□□□ -1.36
VPS50-216ENST00000484954 PSAPP07602 524 aa6.58□□□□□ -1.36
VPS50-216ENST00000484954 SIK1P57059 783 aa6.58□□□□□ -1.36
VPS50-216ENST00000484954 ELMSAN1Q6PJG2 1045 aa6.58□□□□□ -1.36
VPS50-216ENST00000484954 IGF2-ASQ6U949 168 aa6.58□□□□□ -1.36
VPS50-216ENST00000484954 WFDC8Q8IUA0 241 aa6.58□□□□□ -1.36
VPS50-216ENST00000484954 DTWD1Q8N5C7 304 aa6.58□□□□□ -1.36
VPS50-216ENST00000484954 EDEM1Q92611 657 aa6.58□□□□□ -1.36
VPS50-216ENST00000484954 TGFB1P01137 390 aa6.57□□□□□ -1.36
VPS50-216ENST00000484954 HOXD8P13378 290 aaPredicted RBP6.57□□□□□ -1.36
VPS50-216ENST00000484954 EIF1AXP47813 144 aaKnown RBP6.57□□□□□ -1.36
VPS50-216ENST00000484954 DNM1Q05193 864 aaKnown RBP6.57□□□□□ -1.36
VPS50-216ENST00000484954 ZNF211Q13398 564 aaPredicted RBP6.57□□□□□ -1.36
VPS50-216ENST00000484954 PCSK7Q16549 785 aa6.57□□□□□ -1.36
VPS50-216ENST00000484954 OR13H1Q8NG92 308 aa6.57□□□□□ -1.36
VPS50-216ENST00000484954 PLD4Q96BZ4 506 aa6.57□□□□□ -1.36
VPS50-216ENST00000484954 GGNBP2Q9H3C7 697 aa6.57□□□□□ -1.36
VPS50-216ENST00000484954 FRRS1LQ9P0K9 344 aa6.57□□□□□ -1.36
VPS50-216ENST00000484954 TMEM63CQ9P1W3 806 aa6.57□□□□□ -1.36
VPS50-216ENST00000484954 DEAF1O75398 565 aaPredicted RBP6.56□□□□□ -1.36
VPS50-216ENST00000484954 SOX18P35713 384 aa6.56□□□□□ -1.36
VPS50-216ENST00000484954 NOM1Q5C9Z4 860 aaKnown RBP6.56□□□□□ -1.36
VPS50-216ENST00000484954 ADAMTSL4Q6UY14 1074 aa6.56□□□□□ -1.36
VPS50-216ENST00000484954 SLC51AQ86UW1 340 aa6.56□□□□□ -1.36
VPS50-216ENST00000484954 RETREG2Q8NC44 543 aa6.56□□□□□ -1.36
VPS50-216ENST00000484954 AKTIPQ9H8T0 292 aa6.56□□□□□ -1.36
VPS50-216ENST00000484954 FAM13BQ9NYF5 915 aa6.56□□□□□ -1.36
VPS50-216ENST00000484954 CNTN3Q9P232 1028 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms