RNA–Protein interactions for RNA: ENST00000484680.1

GTF3C2-211, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 3

Gene GTF3C2, Length 364 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-211ENST00000484680 KIF1BPQ96EK5 621 aa8.05□□□□□ -1.12
GTF3C2-211ENST00000484680 LRRCC1Q9C099 1032 aa8.05□□□□□ -1.12
GTF3C2-211ENST00000484680 LNPKQ9C0E8 428 aa8.05□□□□□ -1.12
GTF3C2-211ENST00000484680 COPRSQ9NQ92 184 aa8.05□□□□□ -1.12
GTF3C2-211ENST00000484680 NOP58Q9Y2X3 529 aaKnown RBP8.05□□□□□ -1.12
GTF3C2-211ENST00000484680 CARMIL3Q8ND23 1372 aa8.05□□□□□ -1.12
GTF3C2-211ENST00000484680 MYH3P11055 1940 aa8.04□□□□□ -1.12
GTF3C2-211ENST00000484680 CSF1RP07333 972 aa8.04□□□□□ -1.12
GTF3C2-211ENST00000484680 IFIT5Q13325 482 aaKnown RBP8.04□□□□□ -1.12
GTF3C2-211ENST00000484680 TAF7LQ5H9L4 462 aa8.04□□□□□ -1.12
GTF3C2-211ENST00000484680 DEFB132Q7Z7B7 95 aa8.04□□□□□ -1.12
GTF3C2-211ENST00000484680 COL23A1Q86Y22 540 aaPredicted RBP8.04□□□□□ -1.12
GTF3C2-211ENST00000484680 SYNE4Q8N205 404 aa8.04□□□□□ -1.12
GTF3C2-211ENST00000484680 NLGN1Q8N2Q7 840 aa8.04□□□□□ -1.12
GTF3C2-211ENST00000484680 MARVELD3Q96A59 401 aa8.04□□□□□ -1.12
GTF3C2-211ENST00000484680 PNPLA7Q6ZV29 1317 aa8.03□□□□□ -1.12
GTF3C2-211ENST00000484680 COL24A1Q17RW2 1714 aa8.03□□□□□ -1.12
GTF3C2-211ENST00000484680 LAMB2P55268 1798 aa8.03□□□□□ -1.12
GTF3C2-211ENST00000484680 ANKRD18BA2A2Z9 1011 aa8.03□□□□□ -1.12
GTF3C2-211ENST00000484680 HCLS1P14317 486 aaPredicted RBP8.03□□□□□ -1.12
GTF3C2-211ENST00000484680 RFX5P48382 616 aaPredicted RBP8.03□□□□□ -1.12
GTF3C2-211ENST00000484680 PTPN12Q05209 780 aaKnown RBP8.03□□□□□ -1.12
GTF3C2-211ENST00000484680 NFIXQ14938 502 aa8.03□□□□□ -1.12
GTF3C2-211ENST00000484680 ERFEQ4G0M1 354 aa8.03□□□□□ -1.12
GTF3C2-211ENST00000484680 CCDC152Q4G0S7 254 aa8.03□□□□□ -1.12
GTF3C2-211ENST00000484680 SLC10A5Q5PT55 438 aa8.03□□□□□ -1.12
GTF3C2-211ENST00000484680 NUTM1Q86Y26 1132 aa8.03□□□□□ -1.12
GTF3C2-211ENST00000484680 CNBD1Q8NA66 436 aa8.03□□□□□ -1.12
GTF3C2-211ENST00000484680 TTLL11Q8NHH1 800 aa8.03□□□□□ -1.12
GTF3C2-211ENST00000484680 RHPN1Q8TCX5 695 aa8.03□□□□□ -1.12
GTF3C2-211ENST00000484680 SIL1Q9H173 461 aa8.03□□□□□ -1.12
GTF3C2-211ENST00000484680 PA2G4Q9UQ80 394 aaKnown RBP8.03□□□□□ -1.12
GTF3C2-211ENST00000484680 TUBGCP6Q96RT7 1819 aa8.03□□□□□ -1.12
GTF3C2-211ENST00000484680 SMARCA5O60264 1052 aaPredicted RBP8.02□□□□□ -1.13
GTF3C2-211ENST00000484680 CIAO1O76071 339 aa8.02□□□□□ -1.13
GTF3C2-211ENST00000484680 ITGA6P23229 1130 aa8.02□□□□□ -1.13
GTF3C2-211ENST00000484680 PDE4AP27815 886 aa8.02□□□□□ -1.13
GTF3C2-211ENST00000484680 TM4SF1P30408 202 aa8.02□□□□□ -1.13
GTF3C2-211ENST00000484680 IL15P40933 162 aaPredicted RBP8.02□□□□□ -1.13
GTF3C2-211ENST00000484680 ST5P78524 1137 aa8.02□□□□□ -1.13
GTF3C2-211ENST00000484680 PDAP1Q13442 181 aaKnown RBP8.02□□□□□ -1.13
GTF3C2-211ENST00000484680 FAM161AQ3B820 660 aa8.02□□□□□ -1.13
GTF3C2-211ENST00000484680 SKAP1Q86WV1 359 aa8.02□□□□□ -1.13
GTF3C2-211ENST00000484680 CLASRPQ8N2M8 674 aaKnown RBP8.02□□□□□ -1.13
GTF3C2-211ENST00000484680 KLHDC4Q8TBB5 520 aa8.02□□□□□ -1.13
GTF3C2-211ENST00000484680 NLRP3Q96P20 1036 aa8.02□□□□□ -1.13
GTF3C2-211ENST00000484680 CCDC85AQ96PX6 553 aaPredicted RBP8.02□□□□□ -1.13
GTF3C2-211ENST00000484680 BCL11AQ9H165 835 aa8.02□□□□□ -1.13
GTF3C2-211ENST00000484680 GREM2Q9H772 168 aa8.02□□□□□ -1.13
GTF3C2-211ENST00000484680 ANO8Q9HCE9 1232 aaPredicted RBP8.02□□□□□ -1.13
GTF3C2-211ENST00000484680 QSER1Q2KHR3 1735 aa8.02□□□□□ -1.13
GTF3C2-211ENST00000484680 DDX60Q8IY21 1712 aaKnown RBP8.01□□□□□ -1.13
GTF3C2-211ENST00000484680 RTL9Q8NET4 1388 aa8.01□□□□□ -1.13
GTF3C2-211ENST00000484680 EYA2O00167 538 aa8.01□□□□□ -1.13
GTF3C2-211ENST00000484680 SERPINB2P05120 415 aa8.01□□□□□ -1.13
GTF3C2-211ENST00000484680 SF3B3Q15393 1217 aaKnown RBP8.01□□□□□ -1.13
GTF3C2-211ENST00000484680 CDC5LQ99459 802 aaKnown RBP8.01□□□□□ -1.13
GTF3C2-211ENST00000484680 IL1RAPL2Q9NP60 686 aa8.01□□□□□ -1.13
GTF3C2-211ENST00000484680 RIC1Q4ADV7 1423 aa8.01□□□□□ -1.13
GTF3C2-211ENST00000484680 ABCC12Q96J65 1359 aa8□□□□□ -1.13
GTF3C2-211ENST00000484680 POLRMTO00411 1230 aaKnown RBP8□□□□□ -1.13
GTF3C2-211ENST00000484680 SASH1O94885 1247 aa8□□□□□ -1.13
GTF3C2-211ENST00000484680 IFIT2P09913 472 aaKnown RBP8□□□□□ -1.13
GTF3C2-211ENST00000484680 IGHMBP2P38935 993 aaKnown RBP8□□□□□ -1.13
GTF3C2-211ENST00000484680 PRR5LQ6MZQ0 368 aa8□□□□□ -1.13
GTF3C2-211ENST00000484680 LDHAL6AQ6ZMR3 332 aa8□□□□□ -1.13
GTF3C2-211ENST00000484680 PLEKHM2Q8IWE5 1019 aa8□□□□□ -1.13
GTF3C2-211ENST00000484680 UPF1Q92900 1129 aaKnown RBP eCLIP8□□□□□ -1.13
GTF3C2-211ENST00000484680 GPATCH3Q96I76 525 aa8□□□□□ -1.13
GTF3C2-211ENST00000484680 ZNF594Q96JF6 807 aaPredicted RBP8□□□□□ -1.13
GTF3C2-211ENST00000484680 MPHOSPH8Q99549 860 aa8□□□□□ -1.13
GTF3C2-211ENST00000484680 CNNM1Q9NRU3 951 aa8□□□□□ -1.13
GTF3C2-211ENST00000484680 PARP3Q9Y6F1 533 aa8□□□□□ -1.13
GTF3C2-211ENST00000484680 MMP10P09238 476 aa7.99□□□□□ -1.13
GTF3C2-211ENST00000484680 MX1P20591 662 aa7.99□□□□□ -1.13
GTF3C2-211ENST00000484680 DDR1Q08345 913 aa7.99□□□□□ -1.13
GTF3C2-211ENST00000484680 TFCP2Q12800 502 aa7.99□□□□□ -1.13
GTF3C2-211ENST00000484680 ATG9AQ7Z3C6 839 aa7.99□□□□□ -1.13
GTF3C2-211ENST00000484680 AACSQ86V21 672 aa7.99□□□□□ -1.13
GTF3C2-211ENST00000484680 ANKRD18AQ8IVF6 992 aa7.99□□□□□ -1.13
GTF3C2-211ENST00000484680 C16orf71Q8IYS4 520 aaPredicted RBP7.99□□□□□ -1.13
GTF3C2-211ENST00000484680 SLC16A10Q8TF71 515 aa7.99□□□□□ -1.13
GTF3C2-211ENST00000484680 OSBPL3Q9H4L5 887 aa7.99□□□□□ -1.13
GTF3C2-211ENST00000484680 GPR108Q9NPR9 543 aa7.99□□□□□ -1.13
GTF3C2-211ENST00000484680 CEP126Q9P2H0 1117 aa7.99□□□□□ -1.13
GTF3C2-211ENST00000484680 AKAP2Q9Y2D5 859 aa7.99□□□□□ -1.13
GTF3C2-211ENST00000484680 AOX1Q06278 1338 aa7.99□□□□□ -1.13
GTF3C2-211ENST00000484680 MROH5Q6ZUA9 1318 aa7.99□□□□□ -1.13
GTF3C2-211ENST00000484680 POTEB3A0JP26 581 aa7.98□□□□□ -1.13
GTF3C2-211ENST00000484680 ERC2O15083 957 aa7.98□□□□□ -1.13
GTF3C2-211ENST00000484680 PDE1AP54750 535 aa7.98□□□□□ -1.13
GTF3C2-211ENST00000484680 EMP3P54852 163 aa7.98□□□□□ -1.13
GTF3C2-211ENST00000484680 LRRC24Q50LG9 513 aa7.98□□□□□ -1.13
GTF3C2-211ENST00000484680 TNNI3KQ59H18 835 aa7.98□□□□□ -1.13
GTF3C2-211ENST00000484680 BMP2KLQ5H9B9 411 aa7.98□□□□□ -1.13
GTF3C2-211ENST00000484680 METTL24Q5JXM2 366 aa7.98□□□□□ -1.13
GTF3C2-211ENST00000484680 MSL1Q68DK7 614 aa7.98□□□□□ -1.13
GTF3C2-211ENST00000484680 POTEBQ6S5H4 581 aa7.98□□□□□ -1.13
GTF3C2-211ENST00000484680 DDX46Q7L014 1031 aaKnown RBP7.98□□□□□ -1.13
GTF3C2-211ENST00000484680 CCDC24Q8N4L8 307 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms