RNA–Protein interactions for RNA: ENST00000484566.5

DDX39B-221, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-221ENST00000484566 TRAF5O00463 557 aa11.39□□□□□ -0.59
DDX39B-221ENST00000484566 SNRPA1P09661 255 aaKnown RBP11.39□□□□□ -0.59
DDX39B-221ENST00000484566 EPS15P42566 896 aa11.39□□□□□ -0.59
DDX39B-221ENST00000484566 FMR1Q06787 632 aaKnown RBP eCLIP11.39□□□□□ -0.59
DDX39B-221ENST00000484566 PDIA6Q15084 440 aa11.39□□□□□ -0.59
DDX39B-221ENST00000484566 GRIPAP1Q4V328 841 aa11.39□□□□□ -0.59
DDX39B-221ENST00000484566 CST9Q5W186 159 aa11.39□□□□□ -0.59
DDX39B-221ENST00000484566 CIAPIN1Q6FI81 312 aa11.39□□□□□ -0.59
DDX39B-221ENST00000484566 NIM1KQ8IY84 436 aa11.39□□□□□ -0.59
DDX39B-221ENST00000484566 SNED1Q8TER0 1413 aa11.39□□□□□ -0.59
DDX39B-221ENST00000484566 RPGRQ92834 1020 aaKnown RBP11.39□□□□□ -0.59
DDX39B-221ENST00000484566 NYXQ9GZU5 481 aa11.39□□□□□ -0.59
DDX39B-221ENST00000484566 HPS5Q9UPZ3 1129 aa11.39□□□□□ -0.59
DDX39B-221ENST00000484566 AKAP11Q9UKA4 1901 aa11.39□□□□□ -0.59
DDX39B-221ENST00000484566 COL3A1P02461 1466 aaPredicted RBP11.38□□□□□ -0.59
DDX39B-221ENST00000484566 KCNQ3O43525 872 aa11.38□□□□□ -0.59
DDX39B-221ENST00000484566 CELF2O95319 508 aaKnown RBP11.38□□□□□ -0.59
DDX39B-221ENST00000484566 CRY2Q49AN0 593 aa11.38□□□□□ -0.59
DDX39B-221ENST00000484566 CDAN1Q8IWY9 1227 aa11.38□□□□□ -0.59
DDX39B-221ENST00000484566 ZNF687Q8N1G0 1237 aa11.38□□□□□ -0.59
DDX39B-221ENST00000484566 MPNDQ8N594 471 aa11.38□□□□□ -0.59
DDX39B-221ENST00000484566 ZNF454Q8N9F8 522 aa11.38□□□□□ -0.59
DDX39B-221ENST00000484566 COL4A5P29400 1685 aa11.38□□□□□ -0.59
DDX39B-221ENST00000484566 ABCC12Q96J65 1359 aa11.38□□□□□ -0.59
DDX39B-221ENST00000484566 CEP290O15078 2479 aa11.37□□□□□ -0.59
DDX39B-221ENST00000484566 LAMB4A4D0S4 1761 aa11.37□□□□□ -0.59
DDX39B-221ENST00000484566 SAPCD2Q86UD0 394 aa11.37□□□□□ -0.59
DDX39B-221ENST00000484566 RTF1Q92541 710 aaKnown RBP11.37□□□□□ -0.59
DDX39B-221ENST00000484566 HHIPL1Q96JK4 782 aa11.37□□□□□ -0.59
DDX39B-221ENST00000484566 TMX4Q9H1E5 349 aaPredicted RBP11.37□□□□□ -0.59
DDX39B-221ENST00000484566 ADARB2Q9NS39 739 aaKnown RBP11.37□□□□□ -0.59
DDX39B-221ENST00000484566 CLSPNQ9HAW4 1339 aa11.36□□□□□ -0.59
DDX39B-221ENST00000484566 RIC1Q4ADV7 1423 aa11.36□□□□□ -0.59
DDX39B-221ENST00000484566 PRAMEF22A3QJZ6 481 aa11.36□□□□□ -0.59
DDX39B-221ENST00000484566 PPEF1O14829 653 aaPredicted RBP11.36□□□□□ -0.59
DDX39B-221ENST00000484566 PPIP5K2O43314 1243 aa11.36□□□□□ -0.59
DDX39B-221ENST00000484566 CC2D1BQ5T0F9 858 aaKnown RBP11.36□□□□□ -0.59
DDX39B-221ENST00000484566 CTU1Q7Z7A3 348 aaKnown RBP11.36□□□□□ -0.59
DDX39B-221ENST00000484566 NUP98P52948 1817 aa11.35□□□□□ -0.59
DDX39B-221ENST00000484566 NBPF26B4DH59 902 aa11.35□□□□□ -0.59
DDX39B-221ENST00000484566 PRKAR2BP31323 418 aa11.35□□□□□ -0.59
DDX39B-221ENST00000484566 HLFQ16534 295 aa11.35□□□□□ -0.59
DDX39B-221ENST00000484566 NBPF10Q6P3W6 841 aaKnown RBP11.35□□□□□ -0.59
DDX39B-221ENST00000484566 NUTM1Q86Y26 1132 aa11.35□□□□□ -0.59
DDX39B-221ENST00000484566 RBM17Q96I25 401 aaKnown RBP11.35□□□□□ -0.59
DDX39B-221ENST00000484566 ZNF408Q9H9D4 720 aa11.35□□□□□ -0.59
DDX39B-221ENST00000484566 GPRC5DQ9NZD1 345 aa11.35□□□□□ -0.59
DDX39B-221ENST00000484566 IBTKQ9P2D0 1353 aaPredicted RBP11.35□□□□□ -0.59
DDX39B-221ENST00000484566 KIF7Q2M1P5 1343 aa11.35□□□□□ -0.59
DDX39B-221ENST00000484566 TCERG1O14776 1098 aaKnown RBP11.34□□□□□ -0.59
DDX39B-221ENST00000484566 HOXA10P31260 410 aaPredicted RBP11.34□□□□□ -0.59
DDX39B-221ENST00000484566 NOGQ13253 232 aa11.34□□□□□ -0.59
DDX39B-221ENST00000484566 CDHR2Q9BYE9 1310 aa11.34□□□□□ -0.59
DDX39B-221ENST00000484566 NPC1L1Q9UHC9 1359 aa11.33□□□□□ -0.6
DDX39B-221ENST00000484566 RANBP2P49792 3224 aaKnown RBP11.33□□□□□ -0.6
DDX39B-221ENST00000484566 POTEB3A0JP26 581 aa11.33□□□□□ -0.6
DDX39B-221ENST00000484566 FOSBP53539 338 aa11.33□□□□□ -0.6
DDX39B-221ENST00000484566 AOC3Q16853 763 aa11.33□□□□□ -0.6
DDX39B-221ENST00000484566 POTEBQ6S5H4 581 aa11.33□□□□□ -0.6
DDX39B-221ENST00000484566 KIF6Q6ZMV9 814 aa11.33□□□□□ -0.6
DDX39B-221ENST00000484566 ZIC5Q96T25 663 aa11.33□□□□□ -0.6
DDX39B-221ENST00000484566 EPAS1Q99814 870 aa11.33□□□□□ -0.6
DDX39B-221ENST00000484566 BCL2L13Q9BXK5 485 aa11.33□□□□□ -0.6
DDX39B-221ENST00000484566 COL25A1Q9BXS0 654 aaPredicted RBP11.33□□□□□ -0.6
DDX39B-221ENST00000484566 GLIS2Q9BZE0 524 aaPredicted RBP11.33□□□□□ -0.6
DDX39B-221ENST00000484566 ERVV-1B6SEH8 477 aa11.32□□□□□ -0.6
DDX39B-221ENST00000484566 PBX2P40425 430 aa11.32□□□□□ -0.6
DDX39B-221ENST00000484566 GMPSP49915 693 aaPredicted RBP11.32□□□□□ -0.6
DDX39B-221ENST00000484566 MCM10Q7L590 875 aa11.32□□□□□ -0.6
DDX39B-221ENST00000484566 NGEFQ8N5V2 710 aa11.32□□□□□ -0.6
DDX39B-221ENST00000484566 SUPT20HQ8NEM7 779 aa11.32□□□□□ -0.6
DDX39B-221ENST00000484566 ZC3H15Q8WU90 426 aaKnown RBP11.32□□□□□ -0.6
DDX39B-221ENST00000484566 FBXW7Q969H0 707 aa11.32□□□□□ -0.6
DDX39B-221ENST00000484566 ZDHHC16Q969W1 377 aa11.32□□□□□ -0.6
DDX39B-221ENST00000484566 PHACTR3Q96KR7 559 aa11.32□□□□□ -0.6
DDX39B-221ENST00000484566 CFAP53Q96M91 514 aa11.32□□□□□ -0.6
DDX39B-221ENST00000484566 CRAMP1Q96RY5 1269 aa11.32□□□□□ -0.6
DDX39B-221ENST00000484566 VPS33BQ9H267 617 aa11.32□□□□□ -0.6
DDX39B-221ENST00000484566 SAGE1Q9NXZ1 904 aa11.32□□□□□ -0.6
DDX39B-221ENST00000484566 ZNRF3Q9ULT6 936 aa11.32□□□□□ -0.6
DDX39B-221ENST00000484566 MAP3K15Q6ZN16 1313 aa11.32□□□□□ -0.6
DDX39B-221ENST00000484566 GPTP24298 496 aa11.31□□□□□ -0.6
DDX39B-221ENST00000484566 TRIM26Q12899 539 aaPredicted RBP11.31□□□□□ -0.6
DDX39B-221ENST00000484566 CNGB1Q14028 1251 aaPredicted RBP11.31□□□□□ -0.6
DDX39B-221ENST00000484566 PKN2Q16513 984 aaKnown RBP11.31□□□□□ -0.6
DDX39B-221ENST00000484566 TYW1BQ6NUM6 668 aa11.31□□□□□ -0.6
DDX39B-221ENST00000484566 CDC37L1Q7L3B6 337 aa11.31□□□□□ -0.6
DDX39B-221ENST00000484566 DDX12PQ92771 950 aa11.31□□□□□ -0.6
DDX39B-221ENST00000484566 RSPH6AQ9H0K4 717 aa11.31□□□□□ -0.6
DDX39B-221ENST00000484566 KIAA0100Q14667 2235 aaKnown RBP11.31□□□□□ -0.6
DDX39B-221ENST00000484566 BRCA2P51587 3418 aa11.31□□□□□ -0.6
DDX39B-221ENST00000484566 CENPFP49454 3210 aa11.3□□□□□ -0.6
DDX39B-221ENST00000484566 HUNKP57058 714 aa11.3□□□□□ -0.6
DDX39B-221ENST00000484566 CXCL9Q07325 125 aa11.3□□□□□ -0.6
DDX39B-221ENST00000484566 NUDCQ9Y266 331 aa11.3□□□□□ -0.6
DDX39B-221ENST00000484566 UBN2Q6ZU65 1347 aa11.3□□□□□ -0.6
DDX39B-221ENST00000484566 VCANP13611 3396 aa11.29□□□□□ -0.6
DDX39B-221ENST00000484566 GRXCR2A6NFK2 248 aa11.29□□□□□ -0.6
DDX39B-221ENST00000484566 PER1O15534 1290 aaPredicted RBP11.29□□□□□ -0.6
DDX39B-221ENST00000484566 TNIP1Q15025 636 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms