RNA–Protein interactions for RNA: ENST00000484556.1

DDR1-245, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 1,038 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-245ENST00000484556 GPSM2P81274 684 aa23.83■■□□□ 1.41
DDR1-245ENST00000484556 NOM1Q5C9Z4 860 aaKnown RBP23.83■■□□□ 1.41
DDR1-245ENST00000484556 LRP10Q7Z4F1 713 aa23.83■■□□□ 1.41
DDR1-245ENST00000484556 CELF1Q92879 486 aaKnown RBP23.83■■□□□ 1.41
DDR1-245ENST00000484556 TRMT112Q9UI30 125 aaKnown RBP23.83■■□□□ 1.41
DDR1-245ENST00000484556 NUDCQ9Y266 331 aa23.83■■□□□ 1.41
DDR1-245ENST00000484556 BRCA2P51587 3418 aa23.82■■□□□ 1.4
DDR1-245ENST00000484556 TM4SF4P48230 202 aa23.82■■□□□ 1.4
DDR1-245ENST00000484556 PROSER3Q2NL68 480 aa23.82■■□□□ 1.4
DDR1-245ENST00000484556 PRAMEF18Q5VWM3 479 aa23.82■■□□□ 1.4
DDR1-245ENST00000484556 PNISRQ8TF01 805 aaKnown RBP23.82■■□□□ 1.4
DDR1-245ENST00000484556 ERBB4Q15303 1308 aa23.82■■□□□ 1.4
DDR1-245ENST00000484556 VIL1P09327 827 aaKnown RBP23.81■■□□□ 1.4
DDR1-245ENST00000484556 SH3TC1Q8TE82 1336 aa23.81■■□□□ 1.4
DDR1-245ENST00000484556 TTLL12Q14166 644 aaPredicted RBP23.8■■□□□ 1.4
DDR1-245ENST00000484556 COLQQ9Y215 455 aaPredicted RBP23.8■■□□□ 1.4
DDR1-245ENST00000484556 TRIM17Q9Y577 477 aa23.8■■□□□ 1.4
DDR1-245ENST00000484556 ZNF280AP59817 542 aaPredicted RBP23.79■■□□□ 1.4
DDR1-245ENST00000484556 PDIA6Q15084 440 aa23.79■■□□□ 1.4
DDR1-245ENST00000484556 EYA3Q99504 573 aa23.79■■□□□ 1.4
DDR1-245ENST00000484556 PSME4Q14997 1843 aa23.79■■□□□ 1.4
DDR1-245ENST00000484556 SZT2Q5T011 3432 aa23.78■■□□□ 1.4
DDR1-245ENST00000484556 EIF2S2P20042 333 aaKnown RBP23.78■■□□□ 1.4
DDR1-245ENST00000484556 TBC1D16Q8TBP0 767 aa23.78■■□□□ 1.4
DDR1-245ENST00000484556 SREBF2Q12772 1141 aa23.77■■□□□ 1.4
DDR1-245ENST00000484556 KIAA0100Q14667 2235 aaKnown RBP23.76■■□□□ 1.39
DDR1-245ENST00000484556 EN2P19622 333 aaPredicted RBP23.76■■□□□ 1.39
DDR1-245ENST00000484556 AIMP1Q12904 312 aaKnown RBP23.76■■□□□ 1.39
DDR1-245ENST00000484556 HSP90AB3PQ58FF7 597 aa23.76■■□□□ 1.39
DDR1-245ENST00000484556 INTS3Q68E01 1043 aaKnown RBP23.76■■□□□ 1.39
DDR1-245ENST00000484556 PITPNM2Q9BZ72 1349 aa23.76■■□□□ 1.39
DDR1-245ENST00000484556 RSBN1LQ6PCB5 846 aaPredicted RBP23.75■■□□□ 1.39
DDR1-245ENST00000484556 OTOP1Q7RTM1 612 aa23.75■■□□□ 1.39
DDR1-245ENST00000484556 CFHR5Q9BXR6 569 aa23.75■■□□□ 1.39
DDR1-245ENST00000484556 MYOZ2Q9NPC6 264 aa23.75■■□□□ 1.39
DDR1-245ENST00000484556 G3V3G9 751 aa23.74■■□□□ 1.39
DDR1-245ENST00000484556 DCAF8Q5TAQ9 597 aa23.74■■□□□ 1.39
DDR1-245ENST00000484556 COPS6Q7L5N1 327 aa23.74■■□□□ 1.39
DDR1-245ENST00000484556 ZC3H12CQ9C0D7 883 aaKnown RBP23.74■■□□□ 1.39
DDR1-245ENST00000484556 ZNF609O15014 1411 aa23.74■■□□□ 1.39
DDR1-245ENST00000484556 TCIRG1Q13488 830 aa23.73■■□□□ 1.39
DDR1-245ENST00000484556 AGBL3Q8NEM8 1001 aa23.73■■□□□ 1.39
DDR1-245ENST00000484556 XAGE3Q8WTP9 111 aa23.73■■□□□ 1.39
DDR1-245ENST00000484556 NECTIN2Q92692 538 aa23.72■■□□□ 1.39
DDR1-245ENST00000484556 TRIOBPQ9H2D6 2365 aa23.71■■□□□ 1.39
DDR1-245ENST00000484556 UFL1O94874 794 aa23.71■■□□□ 1.39
DDR1-245ENST00000484556 USP17L8P0C7I0 530 aa23.71■■□□□ 1.39
DDR1-245ENST00000484556 PTPN12Q05209 780 aaKnown RBP23.71■■□□□ 1.39
DDR1-245ENST00000484556 TRIM26Q12899 539 aaPredicted RBP23.71■■□□□ 1.39
DDR1-245ENST00000484556 PRKG1Q13976 671 aa23.71■■□□□ 1.39
DDR1-245ENST00000484556 DLL1O00548 723 aa23.7■■□□□ 1.38
DDR1-245ENST00000484556 NBPF9Q3BBW0 867 aa23.7■■□□□ 1.38
DDR1-245ENST00000484556 SF3B3Q15393 1217 aaKnown RBP23.69■■□□□ 1.38
DDR1-245ENST00000484556 FAM89AQ96GI7 184 aa23.69■■□□□ 1.38
DDR1-245ENST00000484556 GMLQ99445 158 aa23.69■■□□□ 1.38
DDR1-245ENST00000484556 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.69■■□□□ 1.38
DDR1-245ENST00000484556 CLSPNQ9HAW4 1339 aa23.68■■□□□ 1.38
DDR1-245ENST00000484556 RTL5Q5HYW3 569 aaPredicted RBP23.68■■□□□ 1.38
DDR1-245ENST00000484556 TSPYL4Q9UJ04 414 aa23.68■■□□□ 1.38
DDR1-245ENST00000484556 PTPN22Q9Y2R2 807 aa23.68■■□□□ 1.38
DDR1-245ENST00000484556 NF2P35240 595 aa23.67■■□□□ 1.38
DDR1-245ENST00000484556 SPRYD7Q5W111 196 aa23.67■■□□□ 1.38
DDR1-245ENST00000484556 ALDH1A1P00352 501 aa23.66■■□□□ 1.38
DDR1-245ENST00000484556 PPP2R1AP30153 589 aa23.66■■□□□ 1.38
DDR1-245ENST00000484556 CD99L2Q8TCZ2 262 aa23.66■■□□□ 1.38
DDR1-245ENST00000484556 ARMC5Q96C12 935 aa23.66■■□□□ 1.38
DDR1-245ENST00000484556 PCGF6Q9BYE7 350 aa23.66■■□□□ 1.38
DDR1-245ENST00000484556 ANKIB1Q9P2G1 1089 aa23.66■■□□□ 1.38
DDR1-245ENST00000484556 FZD1Q9UP38 647 aa23.66■■□□□ 1.38
DDR1-245ENST00000484556 CEP290O15078 2479 aa23.66■■□□□ 1.38
DDR1-245ENST00000484556 RPS8P62241 208 aaKnown RBP23.65■■□□□ 1.38
DDR1-245ENST00000484556 PODXL2Q9NZ53 605 aa23.65■■□□□ 1.38
DDR1-245ENST00000484556 GGA1Q9UJY5 639 aa23.65■■□□□ 1.38
DDR1-245ENST00000484556 ZNF646O15015 1829 aaPredicted RBP23.64■■□□□ 1.38
DDR1-245ENST00000484556 NEFMP07197 916 aa23.64■■□□□ 1.37
DDR1-245ENST00000484556 IFNL1Q8IU54 200 aa23.64■■□□□ 1.37
DDR1-245ENST00000484556 H0YGN5 161 aa23.63■■□□□ 1.37
DDR1-245ENST00000484556 ARMC9Q7Z3E5 817 aa23.63■■□□□ 1.37
DDR1-245ENST00000484556 MXD3Q9BW11 206 aa23.63■■□□□ 1.37
DDR1-245ENST00000484556 ATP5J2-PTCD1G3V325 749 aa23.62■■□□□ 1.37
DDR1-245ENST00000484556 IGF2BP3O00425 579 aaKnown RBP eCLIP23.62■■□□□ 1.37
DDR1-245ENST00000484556 SASH1O94885 1247 aa23.62■■□□□ 1.37
DDR1-245ENST00000484556 NFE2L2Q16236 605 aa23.62■■□□□ 1.37
DDR1-245ENST00000484556 ERO1AQ96HE7 468 aa23.62■■□□□ 1.37
DDR1-245ENST00000484556 SEC31BQ9NQW1 1179 aa23.62■■□□□ 1.37
DDR1-245ENST00000484556 ANGEL1Q9UNK9 670 aaKnown RBP23.62■■□□□ 1.37
DDR1-245ENST00000484556 LAMB1P07942 1786 aa23.62■■□□□ 1.37
DDR1-245ENST00000484556 USP17L3A6NCW0 530 aa23.61■■□□□ 1.37
DDR1-245ENST00000484556 USP17L4A6NCW7 530 aa23.61■■□□□ 1.37
DDR1-245ENST00000484556 WNT10BO00744 389 aa23.61■■□□□ 1.37
DDR1-245ENST00000484556 CAP1Q01518 475 aa23.61■■□□□ 1.37
DDR1-245ENST00000484556 USP17L1Q7RTZ2 530 aa23.61■■□□□ 1.37
DDR1-245ENST00000484556 SLC17A8Q8NDX2 589 aa23.61■■□□□ 1.37
DDR1-245ENST00000484556 OTUD5Q96G74 571 aa23.61■■□□□ 1.37
DDR1-245ENST00000484556 TMEM106CQ9BVX2 250 aa23.61■■□□□ 1.37
DDR1-245ENST00000484556 MANSC4A6NHS7 340 aaPredicted RBP23.6■■□□□ 1.37
DDR1-245ENST00000484556 LDLRAD1Q5T700 205 aa23.6■■□□□ 1.37
DDR1-245ENST00000484556 CHRDL2Q6WN34 429 aa23.6■■□□□ 1.37
DDR1-245ENST00000484556 ISCA1Q9BUE6 129 aa23.6■■□□□ 1.37
DDR1-245ENST00000484556 EFCC1Q9HA90 598 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 224 ms