RNA–Protein interactions for RNA: ENST00000484378.1

HLA-C-207, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 862 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-207ENST00000484378 ABT1Q9ULW3 272 aaKnown RBP36.32■■■■□ 3.4
HLA-C-207ENST00000484378 PSMD14O00487 310 aa36.31■■■■□ 3.4
HLA-C-207ENST00000484378 CDC5LQ99459 802 aaKnown RBP36.31■■■■□ 3.4
HLA-C-207ENST00000484378 CNOT7Q9UIV1 285 aaKnown RBP36.31■■■■□ 3.4
HLA-C-207ENST00000484378 CACNA1FO60840 1977 aa36.3■■■■□ 3.4
HLA-C-207ENST00000484378 VEGFBP49765 207 aa36.3■■■■□ 3.4
HLA-C-207ENST00000484378 FMR1Q06787 632 aaKnown RBP eCLIP36.3■■■■□ 3.4
HLA-C-207ENST00000484378 COL13A1Q5TAT6 717 aaPredicted RBP36.3■■■■□ 3.4
HLA-C-207ENST00000484378 ZBTB12Q9Y330 459 aaPredicted RBP36.3■■■■□ 3.4
HLA-C-207ENST00000484378 RASSF10A6NK89 507 aa36.29■■■■□ 3.4
HLA-C-207ENST00000484378 H7C1D1 291 aa36.29■■■■□ 3.4
HLA-C-207ENST00000484378 TRAF5O00463 557 aa36.29■■■■□ 3.4
HLA-C-207ENST00000484378 VAMP4O75379 141 aa36.29■■■■□ 3.4
HLA-C-207ENST00000484378 UBE3BQ7Z3V4 1068 aa36.29■■■■□ 3.4
HLA-C-207ENST00000484378 MICALL2Q8IY33 904 aa36.29■■■■□ 3.4
HLA-C-207ENST00000484378 TTLL11Q8NHH1 800 aa36.28■■■■□ 3.4
HLA-C-207ENST00000484378 TRPM4Q8TD43 1214 aa36.28■■■■□ 3.4
HLA-C-207ENST00000484378 TRPM7Q96QT4 1865 aa36.28■■■■□ 3.4
HLA-C-207ENST00000484378 SHTN1A0MZ66 631 aa36.27■■■■□ 3.4
HLA-C-207ENST00000484378 G3V3G9 751 aa36.27■■■■□ 3.4
HLA-C-207ENST00000484378 DEFB115Q30KQ5 88 aa36.27■■■■□ 3.4
HLA-C-207ENST00000484378 DCAF8Q5TAQ9 597 aa36.27■■■■□ 3.4
HLA-C-207ENST00000484378 DNAAF4Q8WXU2 420 aa36.27■■■■□ 3.4
HLA-C-207ENST00000484378 DPF2Q92785 391 aa36.27■■■■□ 3.4
HLA-C-207ENST00000484378 XDHP47989 1333 aa36.27■■■■□ 3.4
HLA-C-207ENST00000484378 MYH16Q9H6N6 1097 aa36.26■■■■□ 3.4
HLA-C-207ENST00000484378 GREM2Q9H772 168 aa36.26■■■■□ 3.4
HLA-C-207ENST00000484378 SPINK5Q9NQ38 1064 aaPredicted RBP36.26■■■■□ 3.4
HLA-C-207ENST00000484378 RTL9Q8NET4 1388 aa36.26■■■■□ 3.39
HLA-C-207ENST00000484378 SPEF2Q9C093 1822 aa36.25■■■■□ 3.39
HLA-C-207ENST00000484378 H7C1W4 665 aa36.25■■■■□ 3.39
HLA-C-207ENST00000484378 GCKRQ14397 625 aa36.25■■■■□ 3.39
HLA-C-207ENST00000484378 ZC3H15Q8WU90 426 aaKnown RBP36.25■■■■□ 3.39
HLA-C-207ENST00000484378 RPS12P25398 132 aaKnown RBP36.24■■■■□ 3.39
HLA-C-207ENST00000484378 HIRAP54198 1017 aaPredicted RBP36.24■■■■□ 3.39
HLA-C-207ENST00000484378 KCNQ5Q9NR82 932 aa36.24■■■■□ 3.39
HLA-C-207ENST00000484378 LINS1Q8NG48 757 aa36.23■■■■□ 3.39
HLA-C-207ENST00000484378 GLIS2Q9BZE0 524 aaPredicted RBP36.23■■■■□ 3.39
HLA-C-207ENST00000484378 PGAP2Q9UHJ9 254 aa36.23■■■■□ 3.39
HLA-C-207ENST00000484378 SCN9AQ15858 1988 aa36.22■■■■□ 3.39
HLA-C-207ENST00000484378 ATP2B4P23634 1241 aa36.21■■■■□ 3.39
HLA-C-207ENST00000484378 CST9Q5W186 159 aa36.21■■■■□ 3.39
HLA-C-207ENST00000484378 BSDC1Q9NW68 430 aaPredicted RBP36.2■■■■□ 3.39
HLA-C-207ENST00000484378 SAMD7Q7Z3H4 446 aa36.19■■■■□ 3.38
HLA-C-207ENST00000484378 WDR33Q9C0J8 1336 aaKnown RBP36.18■■■■□ 3.38
HLA-C-207ENST00000484378 TBC1D10BQ4KMP7 808 aaPredicted RBP36.18■■■■□ 3.38
HLA-C-207ENST00000484378 PAXIP1Q6ZW49 1069 aaPredicted RBP36.18■■■■□ 3.38
HLA-C-207ENST00000484378 PLA2G12BQ9BX93 195 aa36.18■■■■□ 3.38
HLA-C-207ENST00000484378 CELF2O95319 508 aaKnown RBP36.17■■■■□ 3.38
HLA-C-207ENST00000484378 CDC37L1Q7L3B6 337 aa36.17■■■■□ 3.38
HLA-C-207ENST00000484378 AIDAQ96BJ3 306 aa36.17■■■■□ 3.38
HLA-C-207ENST00000484378 MINPP1Q9UNW1 487 aa36.17■■■■□ 3.38
HLA-C-207ENST00000484378 VIL1P09327 827 aaKnown RBP36.16■■■■□ 3.38
HLA-C-207ENST00000484378 IGHMBP2P38935 993 aaKnown RBP36.16■■■■□ 3.38
HLA-C-207ENST00000484378 CASP7P55210 303 aa36.16■■■■□ 3.38
HLA-C-207ENST00000484378 FOXN1O15353 648 aa36.15■■■■□ 3.38
HLA-C-207ENST00000484378 FAM161AQ3B820 660 aa36.15■■■■□ 3.38
HLA-C-207ENST00000484378 TNS4Q8IZW8 715 aa36.15■■■■□ 3.38
HLA-C-207ENST00000484378 TLL2Q9Y6L7 1015 aa36.15■■■■□ 3.38
HLA-C-207ENST00000484378 F6X3S4 739 aa36.14■■■■□ 3.38
HLA-C-207ENST00000484378 EGFRP00533 1210 aa36.14■■■■□ 3.38
HLA-C-207ENST00000484378 ITGA6P23229 1130 aa36.14■■■■□ 3.38
HLA-C-207ENST00000484378 ZNF408Q9H9D4 720 aa36.14■■■■□ 3.38
HLA-C-207ENST00000484378 PSME4Q14997 1843 aa36.13■■■■□ 3.37
HLA-C-207ENST00000484378 RBM26Q5T8P6 1007 aaKnown RBP36.13■■■■□ 3.37
HLA-C-207ENST00000484378 CAPNS2Q96L46 248 aa36.13■■■■□ 3.37
HLA-C-207ENST00000484378 MED23Q9ULK4 1368 aa36.13■■■■□ 3.37
HLA-C-207ENST00000484378 ECE1P42892 770 aa36.12■■■■□ 3.37
HLA-C-207ENST00000484378 GRM1Q13255 1194 aa36.12■■■■□ 3.37
HLA-C-207ENST00000484378 CCT4P50991 539 aaKnown RBP36.11■■■■□ 3.37
HLA-C-207ENST00000484378 ZNF609O15014 1411 aa36.1■■■■□ 3.37
HLA-C-207ENST00000484378 THSD7BQ9C0I4 1608 aa36.1■■■■□ 3.37
HLA-C-207ENST00000484378 WTIPA6NIX2 430 aaPredicted RBP36.1■■■■□ 3.37
HLA-C-207ENST00000484378 CSF1RP07333 972 aa36.1■■■■□ 3.37
HLA-C-207ENST00000484378 KIF4BQ2VIQ3 1234 aa36.1■■■■□ 3.37
HLA-C-207ENST00000484378 BEND3Q5T5X7 828 aa36.1■■■■□ 3.37
HLA-C-207ENST00000484378 CYP4F22Q6NT55 531 aa36.1■■■■□ 3.37
HLA-C-207ENST00000484378 RSBN1LQ6PCB5 846 aaPredicted RBP36.1■■■■□ 3.37
HLA-C-207ENST00000484378 USP48Q86UV5 1035 aa36.1■■■■□ 3.37
HLA-C-207ENST00000484378 MPHOSPH8Q99549 860 aa36.1■■■■□ 3.37
HLA-C-207ENST00000484378 WBP1LQ9NX94 342 aa36.1■■■■□ 3.37
HLA-C-207ENST00000484378 ZNF521Q96K83 1311 aa36.09■■■■□ 3.37
HLA-C-207ENST00000484378 PODNQ7Z5L7 613 aa36.09■■■■□ 3.37
HLA-C-207ENST00000484378 KRT26Q7Z3Y9 468 aa36.08■■■■□ 3.37
HLA-C-207ENST00000484378 SAPCD2Q86UD0 394 aa36.08■■■■□ 3.37
HLA-C-207ENST00000484378 AGBL3Q8NEM8 1001 aa36.08■■■■□ 3.37
HLA-C-207ENST00000484378 CTCFP49711 727 aaPredicted RBP36.07■■■■□ 3.36
HLA-C-207ENST00000484378 MAP2K1Q02750 393 aaPredicted RBP36.07■■■■□ 3.36
HLA-C-207ENST00000484378 DCPSQ96C86 337 aaKnown RBP36.07■■■■□ 3.36
HLA-C-207ENST00000484378 USP17L3A6NCW0 530 aa36.06■■■■□ 3.36
HLA-C-207ENST00000484378 USP17L4A6NCW7 530 aa36.06■■■■□ 3.36
HLA-C-207ENST00000484378 USP17L1Q7RTZ2 530 aa36.06■■■■□ 3.36
HLA-C-207ENST00000484378 ANKRD2Q9GZV1 360 aa36.06■■■■□ 3.36
HLA-C-207ENST00000484378 LEMD3Q9Y2U8 911 aa36.06■■■■□ 3.36
HLA-C-207ENST00000484378 ANKRD18BA2A2Z9 1011 aa36.04■■■■□ 3.36
HLA-C-207ENST00000484378 ZNF280AP59817 542 aaPredicted RBP36.04■■■■□ 3.36
HLA-C-207ENST00000484378 GGA3Q9NZ52 723 aa36.04■■■■□ 3.36
HLA-C-207ENST00000484378 CHMP3Q9Y3E7 222 aa36.04■■■■□ 3.36
HLA-C-207ENST00000484378 ADM5C9JUS6 153 aa36.02■■■■□ 3.36
HLA-C-207ENST00000484378 SLC4A10Q6U841 1118 aa36.02■■■■□ 3.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms