RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 TEFQ10587 303 aa23.17■■□□□ 1.3
RPUSD3-216ENST00000484134 CCDC129Q6ZRS4 1044 aa23.17■■□□□ 1.3
RPUSD3-216ENST00000484134 NBPF11Q86T75 865 aa23.17■■□□□ 1.3
RPUSD3-216ENST00000484134 ABTB2Q8N961 1025 aa23.17■■□□□ 1.3
RPUSD3-216ENST00000484134 NPHP1O15259 732 aa23.16■■□□□ 1.3
RPUSD3-216ENST00000484134 CTAGE5O15320 804 aa23.16■■□□□ 1.3
RPUSD3-216ENST00000484134 SMARCC2Q8TAQ2 1214 aa23.16■■□□□ 1.3
RPUSD3-216ENST00000484134 FBXW7Q969H0 707 aa23.16■■□□□ 1.3
RPUSD3-216ENST00000484134 USP28Q96RU2 1077 aa23.16■■□□□ 1.3
RPUSD3-216ENST00000484134 SETD1BQ9UPS6 1966 aaKnown RBP23.16■■□□□ 1.3
RPUSD3-216ENST00000484134 SEC62Q99442 399 aaKnown RBP23.16■■□□□ 1.3
RPUSD3-216ENST00000484134 TAF3Q5VWG9 929 aa23.15■■□□□ 1.3
RPUSD3-216ENST00000484134 AOPEPQ8N6M6 819 aa23.15■■□□□ 1.3
RPUSD3-216ENST00000484134 CTDNEP1O95476 244 aa23.15■■□□□ 1.3
RPUSD3-216ENST00000484134 CYP21A2P08686 494 aa23.15■■□□□ 1.3
RPUSD3-216ENST00000484134 KRT32Q14532 448 aa23.15■■□□□ 1.3
RPUSD3-216ENST00000484134 LRRN4CLQ8ND94 238 aa23.15■■□□□ 1.3
RPUSD3-216ENST00000484134 SYTL4Q96C24 671 aaPredicted RBP23.15■■□□□ 1.3
RPUSD3-216ENST00000484134 CHMP4AQ9BY43 222 aa23.15■■□□□ 1.3
RPUSD3-216ENST00000484134 KCND1Q9NSA2 647 aa23.15■■□□□ 1.3
RPUSD3-216ENST00000484134 DIP2AQ14689 1571 aa23.15■■□□□ 1.3
RPUSD3-216ENST00000484134 PPFIA3O75145 1194 aa23.14■■□□□ 1.29
RPUSD3-216ENST00000484134 SLU7O95391 586 aaKnown RBP23.14■■□□□ 1.29
RPUSD3-216ENST00000484134 LINS1Q8NG48 757 aa23.14■■□□□ 1.29
RPUSD3-216ENST00000484134 UTYO14607 1347 aa23.14■■□□□ 1.29
RPUSD3-216ENST00000484134 NSUN7Q8NE18 718 aaKnown RBP23.14■■□□□ 1.29
RPUSD3-216ENST00000484134 E4F1Q66K89 784 aaPredicted RBP23.13■■□□□ 1.29
RPUSD3-216ENST00000484134 STOX1Q6ZVD7 989 aa23.13■■□□□ 1.29
RPUSD3-216ENST00000484134 ANO10Q9NW15 660 aa23.13■■□□□ 1.29
RPUSD3-216ENST00000484134 SLFNL1Q499Z3 407 aa23.13■■□□□ 1.29
RPUSD3-216ENST00000484134 CCDC73Q6ZRK6 1079 aa23.13■■□□□ 1.29
RPUSD3-216ENST00000484134 KINO60870 393 aaKnown RBP23.12■■□□□ 1.29
RPUSD3-216ENST00000484134 HDAC5Q9UQL6 1122 aa23.12■■□□□ 1.29
RPUSD3-216ENST00000484134 ZBTB22O15209 634 aa23.11■■□□□ 1.29
RPUSD3-216ENST00000484134 FAM160A1Q05DH4 1040 aa23.11■■□□□ 1.29
RPUSD3-216ENST00000484134 AIMP1Q12904 312 aaKnown RBP23.11■■□□□ 1.29
RPUSD3-216ENST00000484134 EPHA10Q5JZY3 1008 aa23.11■■□□□ 1.29
RPUSD3-216ENST00000484134 ZNF530Q6P9A1 599 aaPredicted RBP23.11■■□□□ 1.29
RPUSD3-216ENST00000484134 ILDR1Q86SU0 546 aaPredicted RBP23.11■■□□□ 1.29
RPUSD3-216ENST00000484134 FSIP1Q8NA03 581 aa23.11■■□□□ 1.29
RPUSD3-216ENST00000484134 ZNF609O15014 1411 aa23.11■■□□□ 1.29
RPUSD3-216ENST00000484134 PFKFB2O60825 505 aa23.11■■□□□ 1.29
RPUSD3-216ENST00000484134 NAA16Q6N069 864 aaPredicted RBP23.11■■□□□ 1.29
RPUSD3-216ENST00000484134 OSBPL5Q9H0X9 879 aaPredicted RBP23.11■■□□□ 1.29
RPUSD3-216ENST00000484134 KIF13AQ9H1H9 1805 aa23.11■■□□□ 1.29
RPUSD3-216ENST00000484134 IGKV5-2P06315 115 aa23.1■■□□□ 1.29
RPUSD3-216ENST00000484134 ERCC6LQ2NKX8 1250 aa23.1■■□□□ 1.29
RPUSD3-216ENST00000484134 DBNLQ9UJU6 430 aaKnown RBP23.1■■□□□ 1.29
RPUSD3-216ENST00000484134 MYH15Q9Y2K3 1946 aa23.1■■□□□ 1.29
RPUSD3-216ENST00000484134 CEP57L1Q8IYX8 460 aa23.1■■□□□ 1.29
RPUSD3-216ENST00000484134 GUCY1B3Q02153 619 aa23.09■■□□□ 1.29
RPUSD3-216ENST00000484134 C14orf37Q86TY3 774 aa23.09■■□□□ 1.29
RPUSD3-216ENST00000484134 IP6K1Q92551 441 aa23.09■■□□□ 1.29
RPUSD3-216ENST00000484134 L2HGDHQ9H9P8 463 aa23.09■■□□□ 1.29
RPUSD3-216ENST00000484134 PTPDC1A2A3K4 754 aa23.09■■□□□ 1.29
RPUSD3-216ENST00000484134 AKAP4Q5JQC9 854 aa23.09■■□□□ 1.29
RPUSD3-216ENST00000484134 ARMCX5Q6P1M9 558 aa23.09■■□□□ 1.29
RPUSD3-216ENST00000484134 LRRC59Q96AG4 307 aaKnown RBP23.09■■□□□ 1.29
RPUSD3-216ENST00000484134 LLPHQ9BRT6 129 aaKnown RBP23.09■■□□□ 1.29
RPUSD3-216ENST00000484134 H2AFXP16104 143 aaPredicted RBP23.08■■□□□ 1.29
RPUSD3-216ENST00000484134 ME1P48163 572 aa23.08■■□□□ 1.29
RPUSD3-216ENST00000484134 APOBRQ0VD83 1088 aa23.08■■□□□ 1.29
RPUSD3-216ENST00000484134 PPP1R13BQ96KQ4 1090 aa23.08■■□□□ 1.29
RPUSD3-216ENST00000484134 GSDMDP57764 484 aa23.08■■□□□ 1.29
RPUSD3-216ENST00000484134 CCT2P78371 535 aaKnown RBP23.08■■□□□ 1.29
RPUSD3-216ENST00000484134 NCOA5Q9HCD5 579 aaKnown RBP23.08■■□□□ 1.29
RPUSD3-216ENST00000484134 TMEM51Q9NW97 253 aa23.08■■□□□ 1.29
RPUSD3-216ENST00000484134 U3KPZ7 1027 aaPredicted RBP23.08■■□□□ 1.29
RPUSD3-216ENST00000484134 HEG1Q9ULI3 1381 aa23.08■■□□□ 1.28
RPUSD3-216ENST00000484134 RNMTO43148 476 aaKnown RBP23.07■■□□□ 1.28
RPUSD3-216ENST00000484134 ATP5JP18859 108 aa23.07■■□□□ 1.28
RPUSD3-216ENST00000484134 FGD1P98174 961 aa23.07■■□□□ 1.28
RPUSD3-216ENST00000484134 CCDC93Q567U6 631 aa23.07■■□□□ 1.28
RPUSD3-216ENST00000484134 SYT10Q6XYQ8 523 aa23.07■■□□□ 1.28
RPUSD3-216ENST00000484134 FMR1NBQ8N0W7 255 aaPredicted RBP23.07■■□□□ 1.28
RPUSD3-216ENST00000484134 DPCR1Q3MIW9 517 aa23.06■■□□□ 1.28
RPUSD3-216ENST00000484134 XPO4Q9C0E2 1151 aaKnown RBP23.06■■□□□ 1.28
RPUSD3-216ENST00000484134 PCDHA7Q9UN72 937 aa23.06■■□□□ 1.28
RPUSD3-216ENST00000484134 A0A1B0GVL5 298 aa23.06■■□□□ 1.28
RPUSD3-216ENST00000484134 ERICH4A6NGS2 130 aa23.06■■□□□ 1.28
RPUSD3-216ENST00000484134 PDIA6Q15084 440 aa23.06■■□□□ 1.28
RPUSD3-216ENST00000484134 FHOD1Q9Y613 1164 aa23.06■■□□□ 1.28
RPUSD3-216ENST00000484134 SLIT1O75093 1534 aa23.06■■□□□ 1.28
RPUSD3-216ENST00000484134 A0A0G2JLW4 131 aa23.05■■□□□ 1.28
RPUSD3-216ENST00000484134 KIF2AO00139 706 aaPredicted RBP23.05■■□□□ 1.28
RPUSD3-216ENST00000484134 DNAJC2Q99543 621 aaKnown RBP23.05■■□□□ 1.28
RPUSD3-216ENST00000484134 MRC1P22897 1456 aa23.05■■□□□ 1.28
RPUSD3-216ENST00000484134 ZNF396Q96N95 335 aaPredicted RBP23.05■■□□□ 1.28
RPUSD3-216ENST00000484134 IFNKQ9P0W0 207 aa23.05■■□□□ 1.28
RPUSD3-216ENST00000484134 IMPACTQ9P2X3 320 aa23.05■■□□□ 1.28
RPUSD3-216ENST00000484134 TFCP2Q12800 502 aa23.04■■□□□ 1.28
RPUSD3-216ENST00000484134 MCMDC2Q4G0Z9 681 aa23.04■■□□□ 1.28
RPUSD3-216ENST00000484134 DHX32Q7L7V1 743 aaKnown RBP23.04■■□□□ 1.28
RPUSD3-216ENST00000484134 TMC6Q7Z403 805 aa23.04■■□□□ 1.28
RPUSD3-216ENST00000484134 SDF4Q9BRK5 362 aa23.04■■□□□ 1.28
RPUSD3-216ENST00000484134 LTN1O94822 1766 aa23.04■■□□□ 1.28
RPUSD3-216ENST00000484134 NCAPD2Q15021 1401 aa23.04■■□□□ 1.28
RPUSD3-216ENST00000484134 RGPD2P0DJD1 1756 aa23.04■■□□□ 1.28
RPUSD3-216ENST00000484134 GTF2E1P29083 439 aaPredicted RBP23.04■■□□□ 1.28
RPUSD3-216ENST00000484134 CLCN6P51797 869 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms