RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 RGMBQ6NW40 437 aa12.88□□□□□ -0.35
CPSF4-213ENST00000484112 DCPSQ96C86 337 aaKnown RBP12.88□□□□□ -0.35
CPSF4-213ENST00000484112 KCNQ5Q9NR82 932 aa12.88□□□□□ -0.35
CPSF4-213ENST00000484112 ADM5C9JUS6 153 aa12.87□□□□□ -0.35
CPSF4-213ENST00000484112 ECE2O60344 883 aa12.87□□□□□ -0.35
CPSF4-213ENST00000484112 EGFRP00533 1210 aa12.87□□□□□ -0.35
CPSF4-213ENST00000484112 C2orf69Q8N8R5 385 aa12.87□□□□□ -0.35
CPSF4-213ENST00000484112 DPF2Q92785 391 aa12.87□□□□□ -0.35
CPSF4-213ENST00000484112 GBA2Q9HCG7 927 aaPredicted RBP12.87□□□□□ -0.35
CPSF4-213ENST00000484112 POLLQ9UGP5 575 aa12.87□□□□□ -0.35
CPSF4-213ENST00000484112 CASP8AP2Q9UKL3 1982 aa12.87□□□□□ -0.35
CPSF4-213ENST00000484112 TAF1P21675 1872 aa12.87□□□□□ -0.35
CPSF4-213ENST00000484112 LAMB2P55268 1798 aa12.86□□□□□ -0.35
CPSF4-213ENST00000484112 G3V3G9 751 aa12.86□□□□□ -0.35
CPSF4-213ENST00000484112 ZNF157P51786 506 aaPredicted RBP12.86□□□□□ -0.35
CPSF4-213ENST00000484112 KIF23Q02241 960 aaPredicted RBP12.86□□□□□ -0.35
CPSF4-213ENST00000484112 DCAF8Q5TAQ9 597 aa12.86□□□□□ -0.35
CPSF4-213ENST00000484112 HDGFL1Q5TGJ6 251 aa12.86□□□□□ -0.35
CPSF4-213ENST00000484112 ANKRD13DQ6ZTN6 518 aa12.86□□□□□ -0.35
CPSF4-213ENST00000484112 PLBD2Q8NHP8 589 aa12.86□□□□□ -0.35
CPSF4-213ENST00000484112 EYA3Q99504 573 aa12.86□□□□□ -0.35
CPSF4-213ENST00000484112 DBF4Q9UBU7 674 aaPredicted RBP12.86□□□□□ -0.35
CPSF4-213ENST00000484112 ANKRD36CQ5JPF3 1778 aa12.85□□□□□ -0.35
CPSF4-213ENST00000484112 SF3B3Q15393 1217 aaKnown RBP12.85□□□□□ -0.35
CPSF4-213ENST00000484112 DUSP27Q5VZP5 1158 aa12.85□□□□□ -0.35
CPSF4-213ENST00000484112 CCDC102AQ96A19 550 aa12.85□□□□□ -0.35
CPSF4-213ENST00000484112 ISCA1Q9BUE6 129 aa12.85□□□□□ -0.35
CPSF4-213ENST00000484112 DUOX1Q9NRD9 1551 aa12.85□□□□□ -0.35
CPSF4-213ENST00000484112 FAM155AB1AL88 458 aaPredicted RBP12.84□□□□□ -0.35
CPSF4-213ENST00000484112 IRS4O14654 1257 aaPredicted RBP12.84□□□□□ -0.35
CPSF4-213ENST00000484112 TRPA1O75762 1119 aa12.84□□□□□ -0.35
CPSF4-213ENST00000484112 RPS12P25398 132 aaKnown RBP12.84□□□□□ -0.35
CPSF4-213ENST00000484112 RPS8P62241 208 aaKnown RBP12.84□□□□□ -0.35
CPSF4-213ENST00000484112 KIF4BQ2VIQ3 1234 aa12.84□□□□□ -0.35
CPSF4-213ENST00000484112 SULF1Q8IWU6 871 aa12.84□□□□□ -0.35
CPSF4-213ENST00000484112 TBC1D16Q8TBP0 767 aa12.84□□□□□ -0.35
CPSF4-213ENST00000484112 ZC3H12CQ9C0D7 883 aaKnown RBP12.84□□□□□ -0.35
CPSF4-213ENST00000484112 MYH16Q9H6N6 1097 aa12.84□□□□□ -0.35
CPSF4-213ENST00000484112 HYPKQ9NX55 129 aa12.84□□□□□ -0.35
CPSF4-213ENST00000484112 ZNF521Q96K83 1311 aa12.84□□□□□ -0.35
CPSF4-213ENST00000484112 RTL9Q8NET4 1388 aa12.83□□□□□ -0.36
CPSF4-213ENST00000484112 GOLGA2Q08379 1002 aa12.83□□□□□ -0.36
CPSF4-213ENST00000484112 RNF186Q9NXI6 227 aa12.83□□□□□ -0.36
CPSF4-213ENST00000484112 GGA3Q9NZ52 723 aa12.83□□□□□ -0.36
CPSF4-213ENST00000484112 ANKIB1Q9P2G1 1089 aa12.83□□□□□ -0.36
CPSF4-213ENST00000484112 ASTN2O75129 1339 aaPredicted RBP12.83□□□□□ -0.36
CPSF4-213ENST00000484112 SOX10P56693 466 aa12.82□□□□□ -0.36
CPSF4-213ENST00000484112 CCDC30Q5VVM6 783 aa12.82□□□□□ -0.36
CPSF4-213ENST00000484112 RIC3Q7Z5B4 369 aa12.82□□□□□ -0.36
CPSF4-213ENST00000484112 SEC31BQ9NQW1 1179 aa12.82□□□□□ -0.36
CPSF4-213ENST00000484112 UFL1O94874 794 aa12.81□□□□□ -0.36
CPSF4-213ENST00000484112 VIL1P09327 827 aaKnown RBP12.81□□□□□ -0.36
CPSF4-213ENST00000484112 SCARF1Q14162 830 aa12.81□□□□□ -0.36
CPSF4-213ENST00000484112 MIER1Q8N108 512 aa12.81□□□□□ -0.36
CPSF4-213ENST00000484112 JARID2Q92833 1246 aaPredicted RBP12.81□□□□□ -0.36
CPSF4-213ENST00000484112 CDCA5Q96FF9 252 aa12.81□□□□□ -0.36
CPSF4-213ENST00000484112 CCDC85AQ96PX6 553 aaPredicted RBP12.81□□□□□ -0.36
CPSF4-213ENST00000484112 CSRNP1Q96S65 589 aa12.81□□□□□ -0.36
CPSF4-213ENST00000484112 SAGE1Q9NXZ1 904 aa12.81□□□□□ -0.36
CPSF4-213ENST00000484112 FANCIQ9NVI1 1328 aa12.81□□□□□ -0.36
CPSF4-213ENST00000484112 DDX60Q8IY21 1712 aaKnown RBP12.8□□□□□ -0.36
CPSF4-213ENST00000484112 SLC10A3P09131 477 aa12.8□□□□□ -0.36
CPSF4-213ENST00000484112 TWISTNBQ3B726 338 aaPredicted RBP12.8□□□□□ -0.36
CPSF4-213ENST00000484112 ANGEL2Q5VTE6 544 aaKnown RBP12.8□□□□□ -0.36
CPSF4-213ENST00000484112 C8orf58Q8NAV2 365 aa12.8□□□□□ -0.36
CPSF4-213ENST00000484112 TSR2Q969E8 191 aaKnown RBP12.8□□□□□ -0.36
CPSF4-213ENST00000484112 MYD88Q99836 296 aa12.8□□□□□ -0.36
CPSF4-213ENST00000484112 GGA1Q9UJY5 639 aa12.8□□□□□ -0.36
CPSF4-213ENST00000484112 COL4A1P02462 1669 aa12.8□□□□□ -0.36
CPSF4-213ENST00000484112 LRRC37AA6NMS7 1700 aa12.79□□□□□ -0.36
CPSF4-213ENST00000484112 E9PSI1 815 aa12.79□□□□□ -0.36
CPSF4-213ENST00000484112 ELL2O00472 640 aaPredicted RBP12.79□□□□□ -0.36
CPSF4-213ENST00000484112 ZBTB38Q8NAP3 1195 aaPredicted RBP12.79□□□□□ -0.36
CPSF4-213ENST00000484112 STK31Q9BXU1 1019 aa12.79□□□□□ -0.36
CPSF4-213ENST00000484112 PHAXQ9H814 394 aaKnown RBP12.79□□□□□ -0.36
CPSF4-213ENST00000484112 SCAF8Q9UPN6 1271 aaKnown RBP12.79□□□□□ -0.36
CPSF4-213ENST00000484112 SALL2Q9Y467 1007 aaPredicted RBP12.79□□□□□ -0.36
CPSF4-213ENST00000484112 POLR2AP24928 1970 aaKnown RBP12.79□□□□□ -0.36
CPSF4-213ENST00000484112 HSP90B1P14625 803 aaKnown RBP12.78□□□□□ -0.36
CPSF4-213ENST00000484112 TRIM28Q13263 835 aaKnown RBP12.78□□□□□ -0.36
CPSF4-213ENST00000484112 CCDC152Q4G0S7 254 aa12.78□□□□□ -0.36
CPSF4-213ENST00000484112 RSBN1LQ6PCB5 846 aaPredicted RBP12.78□□□□□ -0.36
CPSF4-213ENST00000484112 AGBL3Q8NEM8 1001 aa12.78□□□□□ -0.36
CPSF4-213ENST00000484112 PODXL2Q9NZ53 605 aa12.78□□□□□ -0.36
CPSF4-213ENST00000484112 DDX58O95786 925 aaKnown RBP12.77□□□□□ -0.37
CPSF4-213ENST00000484112 USP17L8P0C7I0 530 aa12.77□□□□□ -0.37
CPSF4-213ENST00000484112 MOB2Q70IA6 237 aa12.77□□□□□ -0.37
CPSF4-213ENST00000484112 CTU1Q7Z7A3 348 aaKnown RBP12.77□□□□□ -0.37
CPSF4-213ENST00000484112 RASAL3Q86YV0 1011 aa12.77□□□□□ -0.37
CPSF4-213ENST00000484112 TSPYL6Q8N831 410 aa12.77□□□□□ -0.37
CPSF4-213ENST00000484112 MYOZ2Q9NPC6 264 aa12.77□□□□□ -0.37
CPSF4-213ENST00000484112 PDE8AO60658 829 aa12.76□□□□□ -0.37
CPSF4-213ENST00000484112 ZNF280AP59817 542 aaPredicted RBP12.76□□□□□ -0.37
CPSF4-213ENST00000484112 TTLL12Q14166 644 aaPredicted RBP12.76□□□□□ -0.37
CPSF4-213ENST00000484112 PRAMEF18Q5VWM3 479 aa12.76□□□□□ -0.37
CPSF4-213ENST00000484112 ANKRD18AQ8IVF6 992 aa12.76□□□□□ -0.37
CPSF4-213ENST00000484112 FBXW7Q969H0 707 aa12.76□□□□□ -0.37
CPSF4-213ENST00000484112 HDAC9Q9UKV0 1011 aa12.76□□□□□ -0.37
CPSF4-213ENST00000484112 CACNA1FO60840 1977 aa12.76□□□□□ -0.37
CPSF4-213ENST00000484112 USP17L3A6NCW0 530 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms