RNA–Protein interactions for RNA: ENST00000483955.1

SHROOM4-204, Transcript of shroom family member 4, humanhuman

TSL 2

Gene SHROOM4, Length 882 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-204ENST00000483955 PTPN12Q05209 780 aaKnown RBP11.17□□□□□ -0.62
SHROOM4-204ENST00000483955 G3BP1Q13283 466 aaKnown RBP eCLIP11.17□□□□□ -0.62
SHROOM4-204ENST00000483955 OS9Q13438 667 aaPredicted RBP11.17□□□□□ -0.62
SHROOM4-204ENST00000483955 C3orf67Q6ZVT6 689 aa11.17□□□□□ -0.62
SHROOM4-204ENST00000483955 ANKRD18AQ8IVF6 992 aa11.17□□□□□ -0.62
SHROOM4-204ENST00000483955 RBM17Q96I25 401 aaKnown RBP11.17□□□□□ -0.62
SHROOM4-204ENST00000483955 CCDC85AQ96PX6 553 aaPredicted RBP11.17□□□□□ -0.62
SHROOM4-204ENST00000483955 MPHOSPH8Q99549 860 aa11.17□□□□□ -0.62
SHROOM4-204ENST00000483955 SGIP1Q9BQI5 828 aa11.17□□□□□ -0.62
SHROOM4-204ENST00000483955 NPR1P16066 1061 aa11.16□□□□□ -0.62
SHROOM4-204ENST00000483955 IL15P40933 162 aaPredicted RBP11.16□□□□□ -0.62
SHROOM4-204ENST00000483955 PTGER2P43116 358 aa11.16□□□□□ -0.62
SHROOM4-204ENST00000483955 KIF1BPQ96EK5 621 aa11.16□□□□□ -0.62
SHROOM4-204ENST00000483955 MASTLQ96GX5 879 aa11.16□□□□□ -0.62
SHROOM4-204ENST00000483955 COL11A2P13942 1736 aaPredicted RBP11.15□□□□□ -0.62
SHROOM4-204ENST00000483955 H0YIN7 160 aa11.15□□□□□ -0.62
SHROOM4-204ENST00000483955 EYA2O00167 538 aa11.15□□□□□ -0.62
SHROOM4-204ENST00000483955 ALDH1B1P30837 517 aa11.15□□□□□ -0.62
SHROOM4-204ENST00000483955 HOXA10P31260 410 aaPredicted RBP11.15□□□□□ -0.62
SHROOM4-204ENST00000483955 GRAPQ13588 217 aa11.15□□□□□ -0.62
SHROOM4-204ENST00000483955 LDHAL6AQ6ZMR3 332 aa11.15□□□□□ -0.62
SHROOM4-204ENST00000483955 TMC4Q7Z404 712 aa11.15□□□□□ -0.62
SHROOM4-204ENST00000483955 C2CD5Q86YS7 1000 aa11.15□□□□□ -0.62
SHROOM4-204ENST00000483955 GRAPLQ8TC17 118 aaPredicted RBP11.15□□□□□ -0.62
SHROOM4-204ENST00000483955 CRAMP1Q96RY5 1269 aa11.15□□□□□ -0.62
SHROOM4-204ENST00000483955 LRRCC1Q9C099 1032 aa11.15□□□□□ -0.62
SHROOM4-204ENST00000483955 SEC31BQ9NQW1 1179 aa11.15□□□□□ -0.62
SHROOM4-204ENST00000483955 CNNM1Q9NRU3 951 aa11.15□□□□□ -0.62
SHROOM4-204ENST00000483955 PA2G4Q9UQ80 394 aaKnown RBP11.15□□□□□ -0.62
SHROOM4-204ENST00000483955 EXOC6BQ9Y2D4 811 aa11.15□□□□□ -0.62
SHROOM4-204ENST00000483955 DLEC1Q9Y238 1755 aa11.14□□□□□ -0.63
SHROOM4-204ENST00000483955 POTEIP0CG38 1075 aa11.14□□□□□ -0.63
SHROOM4-204ENST00000483955 SRGNP10124 158 aa11.14□□□□□ -0.63
SHROOM4-204ENST00000483955 TGFB2P61812 414 aa11.14□□□□□ -0.63
SHROOM4-204ENST00000483955 NBR1Q14596 966 aa11.14□□□□□ -0.63
SHROOM4-204ENST00000483955 STYK1Q6J9G0 422 aa11.14□□□□□ -0.63
SHROOM4-204ENST00000483955 KLHDC4Q8TBB5 520 aa11.14□□□□□ -0.63
SHROOM4-204ENST00000483955 ZNF594Q96JF6 807 aaPredicted RBP11.14□□□□□ -0.63
SHROOM4-204ENST00000483955 SIL1Q9H173 461 aa11.14□□□□□ -0.63
SHROOM4-204ENST00000483955 BSDC1Q9NW68 430 aaPredicted RBP11.14□□□□□ -0.63
SHROOM4-204ENST00000483955 CD2APQ9Y5K6 639 aa11.14□□□□□ -0.63
SHROOM4-204ENST00000483955 MROH5Q6ZUA9 1318 aa11.13□□□□□ -0.63
SHROOM4-204ENST00000483955 BBOX1O75936 387 aa11.13□□□□□ -0.63
SHROOM4-204ENST00000483955 RPS8P62241 208 aaKnown RBP11.13□□□□□ -0.63
SHROOM4-204ENST00000483955 NUCB1Q02818 461 aa11.13□□□□□ -0.63
SHROOM4-204ENST00000483955 RHPN1Q8TCX5 695 aa11.13□□□□□ -0.63
SHROOM4-204ENST00000483955 BBXQ8WY36 941 aaPredicted RBP11.13□□□□□ -0.63
SHROOM4-204ENST00000483955 CELF1Q92879 486 aaKnown RBP11.13□□□□□ -0.63
SHROOM4-204ENST00000483955 CNKSR1Q969H4 720 aa11.13□□□□□ -0.63
SHROOM4-204ENST00000483955 PLSCR2Q9NRY7 297 aa11.13□□□□□ -0.63
SHROOM4-204ENST00000483955 SPEF2Q9C093 1822 aa11.13□□□□□ -0.63
SHROOM4-204ENST00000483955 LRRC24Q50LG9 513 aa11.12□□□□□ -0.63
SHROOM4-204ENST00000483955 METTL24Q5JXM2 366 aa11.12□□□□□ -0.63
SHROOM4-204ENST00000483955 ANKRD45Q5TZF3 282 aa11.12□□□□□ -0.63
SHROOM4-204ENST00000483955 CHADLQ6NUI6 762 aa11.12□□□□□ -0.63
SHROOM4-204ENST00000483955 ATG9AQ7Z3C6 839 aa11.12□□□□□ -0.63
SHROOM4-204ENST00000483955 CHD1LQ86WJ1 897 aa11.12□□□□□ -0.63
SHROOM4-204ENST00000483955 CLASRPQ8N2M8 674 aaKnown RBP11.12□□□□□ -0.63
SHROOM4-204ENST00000483955 TMX4Q9H1E5 349 aaPredicted RBP11.12□□□□□ -0.63
SHROOM4-204ENST00000483955 CEP126Q9P2H0 1117 aa11.12□□□□□ -0.63
SHROOM4-204ENST00000483955 SSUH2Q9Y2M2 353 aa11.12□□□□□ -0.63
SHROOM4-204ENST00000483955 RIPOR2Q9Y4F9 1068 aa11.12□□□□□ -0.63
SHROOM4-204ENST00000483955 LRRC37AA6NMS7 1700 aa11.12□□□□□ -0.63
SHROOM4-204ENST00000483955 PPEF1O14829 653 aaPredicted RBP11.11□□□□□ -0.63
SHROOM4-204ENST00000483955 SASH1O94885 1247 aa11.11□□□□□ -0.63
SHROOM4-204ENST00000483955 ZNF622Q969S3 477 aaKnown RBP eCLIP11.11□□□□□ -0.63
SHROOM4-204ENST00000483955 ANKRD2Q9GZV1 360 aa11.11□□□□□ -0.63
SHROOM4-204ENST00000483955 GPR108Q9NPR9 543 aa11.11□□□□□ -0.63
SHROOM4-204ENST00000483955 AKAP2Q9Y2D5 859 aa11.11□□□□□ -0.63
SHROOM4-204ENST00000483955 KIAA1551Q9HCM1 1747 aa11.11□□□□□ -0.63
SHROOM4-204ENST00000483955 ZNF609O15014 1411 aa11.1□□□□□ -0.63
SHROOM4-204ENST00000483955 APBB1O00213 710 aa11.1□□□□□ -0.63
SHROOM4-204ENST00000483955 CHRNA5P30532 468 aa11.1□□□□□ -0.63
SHROOM4-204ENST00000483955 CHRNDQ07001 517 aa11.1□□□□□ -0.63
SHROOM4-204ENST00000483955 PAXIP1Q6ZW49 1069 aaPredicted RBP11.1□□□□□ -0.63
SHROOM4-204ENST00000483955 KLHL34Q8N239 644 aa11.1□□□□□ -0.63
SHROOM4-204ENST00000483955 PUS3Q9BZE2 481 aaKnown RBP11.1□□□□□ -0.63
SHROOM4-204ENST00000483955 LNPKQ9C0E8 428 aa11.1□□□□□ -0.63
SHROOM4-204ENST00000483955 PPP1R1BQ9UD71 204 aaPredicted RBP11.1□□□□□ -0.63
SHROOM4-204ENST00000483955 COL4A1P02462 1669 aa11.1□□□□□ -0.63
SHROOM4-204ENST00000483955 A0A1B0GUL6 1792 aa11.1□□□□□ -0.63
SHROOM4-204ENST00000483955 PDE8BO95263 885 aa11.09□□□□□ -0.63
SHROOM4-204ENST00000483955 IFIT2P09913 472 aaKnown RBP11.09□□□□□ -0.63
SHROOM4-204ENST00000483955 DPEP1P16444 411 aa11.09□□□□□ -0.63
SHROOM4-204ENST00000483955 TFCP2Q12800 502 aa11.09□□□□□ -0.63
SHROOM4-204ENST00000483955 PUM3Q15397 648 aaKnown RBP11.09□□□□□ -0.63
SHROOM4-204ENST00000483955 GRIPAP1Q4V328 841 aa11.09□□□□□ -0.63
SHROOM4-204ENST00000483955 CC2D2BQ6DHV5 1058 aa11.09□□□□□ -0.63
SHROOM4-204ENST00000483955 PRPF40BQ6NWY9 871 aaKnown RBP11.09□□□□□ -0.63
SHROOM4-204ENST00000483955 SP8Q8IXZ3 490 aa11.09□□□□□ -0.63
SHROOM4-204ENST00000483955 TTLL6Q8N841 843 aa11.09□□□□□ -0.63
SHROOM4-204ENST00000483955 VGLL2Q8N8G2 317 aa11.09□□□□□ -0.63
SHROOM4-204ENST00000483955 GPATCH3Q96I76 525 aa11.09□□□□□ -0.63
SHROOM4-204ENST00000483955 IL1RAPL2Q9NP60 686 aa11.09□□□□□ -0.63
SHROOM4-204ENST00000483955 MINPP1Q9UNW1 487 aa11.09□□□□□ -0.63
SHROOM4-204ENST00000483955 ATP6V0A2Q9Y487 856 aa11.09□□□□□ -0.63
SHROOM4-204ENST00000483955 XDHP47989 1333 aa11.09□□□□□ -0.63
SHROOM4-204ENST00000483955 IFIT1P09914 478 aaKnown RBP11.08□□□□□ -0.64
SHROOM4-204ENST00000483955 SLC5A1P13866 664 aa11.08□□□□□ -0.64
SHROOM4-204ENST00000483955 TNNI3KQ59H18 835 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms