RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 IKQ13123 557 aaPredicted RBP11.62□□□□□ -0.55
COL12A1-207ENST00000483888 LARSQ9P2J5 1176 aaKnown RBP11.62□□□□□ -0.55
COL12A1-207ENST00000483888 CCT5P48643 541 aa11.61□□□□□ -0.55
COL12A1-207ENST00000483888 NKIRAS1Q9NYS0 192 aa11.61□□□□□ -0.55
COL12A1-207ENST00000483888 MTUS1Q9ULD2 1270 aa11.61□□□□□ -0.55
COL12A1-207ENST00000483888 TSNARE1Q96NA8 513 aa11.61□□□□□ -0.55
COL12A1-207ENST00000483888 NAPGQ99747 312 aaPredicted RBP11.61□□□□□ -0.55
COL12A1-207ENST00000483888 GNGT1P63211 74 aa11.61□□□□□ -0.55
COL12A1-207ENST00000483888 DNM1Q05193 864 aaKnown RBP11.61□□□□□ -0.55
COL12A1-207ENST00000483888 FYB2Q5VWT5 728 aa11.61□□□□□ -0.55
COL12A1-207ENST00000483888 CCDC102BQ68D86 513 aa11.61□□□□□ -0.55
COL12A1-207ENST00000483888 ARHGAP24Q8N264 748 aa11.61□□□□□ -0.55
COL12A1-207ENST00000483888 IGHDP01880 384 aa11.61□□□□□ -0.55
COL12A1-207ENST00000483888 SESN3P58005 492 aa11.61□□□□□ -0.55
COL12A1-207ENST00000483888 SF3A3Q12874 501 aaKnown RBP eCLIP11.61□□□□□ -0.55
COL12A1-207ENST00000483888 CAPS2Q9BXY5 557 aa11.61□□□□□ -0.55
COL12A1-207ENST00000483888 NACADO15069 1562 aa11.61□□□□□ -0.55
COL12A1-207ENST00000483888 CUX2O14529 1486 aa11.61□□□□□ -0.55
COL12A1-207ENST00000483888 CCDC25Q86WR0 208 aa11.61□□□□□ -0.55
COL12A1-207ENST00000483888 CCDC63Q8NA47 563 aa11.61□□□□□ -0.55
COL12A1-207ENST00000483888 CXorf38Q8TB03 319 aa11.61□□□□□ -0.55
COL12A1-207ENST00000483888 SAAL1Q96ER3 474 aa11.61□□□□□ -0.55
COL12A1-207ENST00000483888 BCAS4Q8TDM0 211 aa11.61□□□□□ -0.55
COL12A1-207ENST00000483888 PDCD7Q8N8D1 485 aaKnown RBP11.61□□□□□ -0.55
COL12A1-207ENST00000483888 RAD50Q92878 1312 aa11.61□□□□□ -0.55
COL12A1-207ENST00000483888 MAGEA9P43362 315 aa11.61□□□□□ -0.55
COL12A1-207ENST00000483888 VSIG1Q86XK7 387 aa11.61□□□□□ -0.55
COL12A1-207ENST00000483888 TRIM35Q9UPQ4 493 aa11.61□□□□□ -0.55
COL12A1-207ENST00000483888 RPGRIP1LQ68CZ1 1315 aa11.6□□□□□ -0.55
COL12A1-207ENST00000483888 CREB3O43889 395 aa11.6□□□□□ -0.55
COL12A1-207ENST00000483888 CTNNA3Q9UI47 895 aa11.6□□□□□ -0.55
COL12A1-207ENST00000483888 RRBP1Q9P2E9 1410 aaKnown RBP11.6□□□□□ -0.55
COL12A1-207ENST00000483888 RASSF2P50749 326 aa11.6□□□□□ -0.55
COL12A1-207ENST00000483888 PHAXQ9H814 394 aaKnown RBP11.6□□□□□ -0.55
COL12A1-207ENST00000483888 AK9Q5TCS8 1911 aa11.6□□□□□ -0.55
COL12A1-207ENST00000483888 HNRNPH2P55795 449 aaKnown RBP11.6□□□□□ -0.55
COL12A1-207ENST00000483888 BICDL2A1A5D9 508 aa11.6□□□□□ -0.55
COL12A1-207ENST00000483888 SLC4A2P04920 1241 aa11.6□□□□□ -0.55
COL12A1-207ENST00000483888 ACTN2P35609 894 aa11.6□□□□□ -0.55
COL12A1-207ENST00000483888 EPSTI1Q96J88 318 aa11.6□□□□□ -0.55
COL12A1-207ENST00000483888 IL1RAPL2Q9NP60 686 aa11.6□□□□□ -0.55
COL12A1-207ENST00000483888 DDX21Q9NR30 783 aaKnown RBP eCLIP11.6□□□□□ -0.55
COL12A1-207ENST00000483888 ERCC6LQ2NKX8 1250 aa11.6□□□□□ -0.55
COL12A1-207ENST00000483888 RNF8O76064 485 aa11.6□□□□□ -0.55
COL12A1-207ENST00000483888 LCA5Q86VQ0 697 aa11.6□□□□□ -0.55
COL12A1-207ENST00000483888 GAS2L2Q8NHY3 880 aa11.6□□□□□ -0.55
COL12A1-207ENST00000483888 U3KPZ7 1027 aaPredicted RBP11.6□□□□□ -0.55
COL12A1-207ENST00000483888 RAPGEF2Q9Y4G8 1499 aa11.6□□□□□ -0.55
COL12A1-207ENST00000483888 ATP2A2P16615 1042 aaKnown RBP11.59□□□□□ -0.55
COL12A1-207ENST00000483888 BRD3Q15059 726 aa11.59□□□□□ -0.55
COL12A1-207ENST00000483888 MMS22LQ6ZRQ5 1243 aa11.59□□□□□ -0.55
COL12A1-207ENST00000483888 CCT2P78371 535 aaKnown RBP11.59□□□□□ -0.55
COL12A1-207ENST00000483888 A0A087WUV0 522 aaPredicted RBP11.59□□□□□ -0.55
COL12A1-207ENST00000483888 TNNC1P63316 161 aa11.59□□□□□ -0.55
COL12A1-207ENST00000483888 INF2Q27J81 1249 aa11.59□□□□□ -0.55
COL12A1-207ENST00000483888 POLR3DP05423 398 aaPredicted RBP11.59□□□□□ -0.55
COL12A1-207ENST00000483888 ARMC2Q8NEN0 867 aa11.59□□□□□ -0.55
COL12A1-207ENST00000483888 FAM71BQ8TC56 605 aa11.59□□□□□ -0.55
COL12A1-207ENST00000483888 ATP2B2Q01814 1243 aa11.59□□□□□ -0.55
COL12A1-207ENST00000483888 RAD51AP2Q09MP3 1159 aa11.59□□□□□ -0.55
COL12A1-207ENST00000483888 IFT20Q8IY31 132 aa11.59□□□□□ -0.55
COL12A1-207ENST00000483888 PLVAPQ9BX97 442 aa11.59□□□□□ -0.55
COL12A1-207ENST00000483888 MTRF1LQ9UGC7 380 aaKnown RBP11.59□□□□□ -0.55
COL12A1-207ENST00000483888 PPFIA3O75145 1194 aa11.59□□□□□ -0.55
COL12A1-207ENST00000483888 HNRNPMP52272 730 aaKnown RBP eCLIP11.59□□□□□ -0.55
COL12A1-207ENST00000483888 VPS52Q8N1B4 723 aa11.59□□□□□ -0.55
COL12A1-207ENST00000483888 PPP1R9BQ96SB3 815 aa11.59□□□□□ -0.55
COL12A1-207ENST00000483888 GGT6Q6P531 493 aa11.59□□□□□ -0.55
COL12A1-207ENST00000483888 IQCA1Q86XH1 822 aa11.59□□□□□ -0.55
COL12A1-207ENST00000483888 PLEKHA4Q9H4M7 779 aa11.59□□□□□ -0.55
COL12A1-207ENST00000483888 PPP1R9AQ9ULJ8 1098 aa11.59□□□□□ -0.55
COL12A1-207ENST00000483888 ZBTB22O15209 634 aa11.58□□□□□ -0.55
COL12A1-207ENST00000483888 SF3B2Q13435 895 aaKnown RBP11.58□□□□□ -0.55
COL12A1-207ENST00000483888 RUFY4Q6ZNE9 571 aa11.58□□□□□ -0.56
COL12A1-207ENST00000483888 EXOC6BQ9Y2D4 811 aa11.58□□□□□ -0.56
COL12A1-207ENST00000483888 RTL1A6NKG5 1358 aa11.58□□□□□ -0.56
COL12A1-207ENST00000483888 F13A1P00488 732 aa11.58□□□□□ -0.56
COL12A1-207ENST00000483888 TAOK1Q7L7X3 1001 aa11.58□□□□□ -0.56
COL12A1-207ENST00000483888 ARMC9Q7Z3E5 817 aa11.58□□□□□ -0.56
COL12A1-207ENST00000483888 YY1AP1Q9H869 796 aa11.58□□□□□ -0.56
COL12A1-207ENST00000483888 C8orf74Q6P047 294 aa11.58□□□□□ -0.56
COL12A1-207ENST00000483888 CFAP157Q5JU67 520 aa11.58□□□□□ -0.56
COL12A1-207ENST00000483888 MED4Q9NPJ6 270 aa11.58□□□□□ -0.56
COL12A1-207ENST00000483888 THEGQ9P2T0 379 aa11.57□□□□□ -0.56
COL12A1-207ENST00000483888 IDEP14735 1019 aa11.57□□□□□ -0.56
COL12A1-207ENST00000483888 ZNF75DP51815 510 aa11.57□□□□□ -0.56
COL12A1-207ENST00000483888 IRX1P78414 480 aaPredicted RBP11.57□□□□□ -0.56
COL12A1-207ENST00000483888 TRIM47Q96LD4 638 aa11.57□□□□□ -0.56
COL12A1-207ENST00000483888 NACAP1Q9BZK3 213 aa11.57□□□□□ -0.56
COL12A1-207ENST00000483888 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.57□□□□□ -0.56
COL12A1-207ENST00000483888 MYO1CO00159 1063 aa11.57□□□□□ -0.56
COL12A1-207ENST00000483888 PDE11AQ9HCR9 933 aa11.57□□□□□ -0.56
COL12A1-207ENST00000483888 PALMDQ9NP74 551 aa11.57□□□□□ -0.56
COL12A1-207ENST00000483888 CCDC122Q5T0U0 273 aa11.57□□□□□ -0.56
COL12A1-207ENST00000483888 PHLDB3Q6NSJ2 640 aa11.57□□□□□ -0.56
COL12A1-207ENST00000483888 PSMD2Q13200 908 aa11.57□□□□□ -0.56
COL12A1-207ENST00000483888 HAUS1Q96CS2 278 aa11.57□□□□□ -0.56
COL12A1-207ENST00000483888 MPHOSPH8Q99549 860 aa11.57□□□□□ -0.56
COL12A1-207ENST00000483888 AKR1B15C9JRZ8 316 aaPredicted RBP11.57□□□□□ -0.56
COL12A1-207ENST00000483888 ATICP31939 592 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms